{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,8]],"date-time":"2026-10-08T23:31:30Z","timestamp":1791502290123,"version":"4.3.4"},"reference-count":39,"publisher":"American Medical Association (AMA)","issue":"7","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["JAMA Netw Open"],"abstract":"<jats:sec id=\"ab-zoi250584-4\">\n                    <jats:title>Importance<\/jats:title>\n                    <jats:p>Hospital-onset bacteremia and fungemia (HOB) are common and potentially preventable complications of hospital care.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec id=\"ab-zoi250584-5\">\n                    <jats:title>Objective<\/jats:title>\n                    <jats:p>To assess whether nonindividual patient features, which summarize interactions with other patients and health care workers (HCWs), can contribute to predictive and causal machine learning models for HOB.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec id=\"ab-zoi250584-6\">\n                    <jats:title>Design, Setting, and Participants<\/jats:title>\n                    <jats:p>This prognostic study included adult patients admitted to Barnes-Jewish Hospital, an academic hospital in St Louis, Missouri, in 2021. Analyses were developed between October 2023 and August 2024 and in April 2025.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec id=\"ab-zoi250584-7\">\n                    <jats:title>Exposure<\/jats:title>\n                    <jats:p>Individual patient features were extracted from electronic health records and used to engineer nonpatient features, including interactions with HCWs and direct or indirect (consecutive room occupancy) patient contact.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec id=\"ab-zoi250584-8\">\n                    <jats:title>Main Outcomes and Measures<\/jats:title>\n                    <jats:p>\n                      HOB was defined as a positive blood culture after the third day of hospitalization. Patients who were hospitalized for more than 3 days were considered at risk for the outcome. We developed 3 gradient boosting models: 2 predictive (with patient features only and with both patient and nonpatient features to predict the occurrence of HOB) and 1 causal to test the association of nonpatient features and HOB. Predictive performance is reported using area under the receiver operating characteristic curve (AUROC) and area under the precision-recall curve (AUPRC), and the results of the causal model are reported as difference in average effects. Sensitivity analyses separated intensive care unit\u2013onset and ward-onset HOB and included a methicillin-resistant\n                      <jats:italic>Staphylococcus aureus<\/jats:italic>\n                      \u2013specific model to adjust for colonization pressure.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec id=\"ab-zoi250584-9\">\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>\n                      Among the 52\u202f442 patients, 34\u202f855 (66.5%) had admissions longer than 72 hours and were included for analysis; of these, 556 (1.6%) developed HOB. The median age for the included patients was 60 (IQR, 44-70) years, 50.5% were female, and obesity was the most frequent comorbidity (25.0%). Nonpatient features, such as a prior occupant of the same room receiving antipseudomonal beta-lactams and the mean number of HCWs per day for the 7 days preceding HOB, improved the model\u2019s performance (AUROC, 0.88 [95% CI, 0.88-0.89]; AUPRC, 0.20 [95% CI, 0.20-0.22]) compared with the patient-only model (AUROC, 0.85 [95% CI, 0.85-0.86]; AUPRC, 0.13 [95% CI, 0.12-0.14]) (\n                      <jats:italic>P<\/jats:italic>\n                      \u2009&amp;amp;lt;\u2009.001). These 2 features were also associated with a higher likelihood of HOB in the causal gradient boosting model.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec id=\"ab-zoi250584-10\">\n                    <jats:title>Conclusions and Relevance<\/jats:title>\n                    <jats:p>These findings suggest that nonindividual patient features may contribute to a comprehensive analysis of HOB when integrated with individual patient features in a machine learning model.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.1001\/jamanetworkopen.2025.18815","type":"journal-article","created":{"date-parts":[[2025,7,2]],"date-time":"2025-07-02T11:00:27Z","timestamp":1751454027000},"page":"e2518815","source":"Crossref","is-referenced-by-count":9,"title":["Integrating Nonindividual Patient Features in Machine Learning Models of Hospital-Onset Bacteremia"],"prefix":"10.1001","volume":"8","author":[{"given":"M. Cristina","family":"Vazquez Guillamet","sequence":"first","affiliation":[{"name":"Division of Infectious Diseases, Department of Medicine, Washington University School of Medicine, St Louis, Missouri"},{"name":"Division of Pulmonary and Critical Care Medicine, Department of Medicine, Washington University School of Medicine, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jingwen","family":"Zhang","sequence":"additional","affiliation":[{"name":"McKelvey School of Engineering, Department of Computer Science & Engineering, Washington University, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alice","family":"Bewley","sequence":"additional","affiliation":[{"name":"Division of Infectious Diseases, Department of Medicine, Washington University School of Medicine, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrew","family":"Atkinson","sequence":"additional","affiliation":[{"name":"Division of Infectious Diseases, Department of Medicine, Washington University School of Medicine, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Heidi","family":"Holtz","sequence":"additional","affiliation":[{"name":"Department of Research, Goldfarb School of Nursing at Barnes-Jewish College, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ziqian","family":"Wang","sequence":"additional","affiliation":[{"name":"McKelvey School of Engineering, Department of Computer Science & Engineering, Washington University, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nicole","family":"Brougham","sequence":"additional","affiliation":[{"name":"Center for Practice Excellence, Goldfarb School of Nursing at Barnes-Jewish College, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chenyang","family":"Lu","sequence":"additional","affiliation":[{"name":"McKelvey School of Engineering, Department of Computer Science & Engineering, Washington University, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marin H.","family":"Kollef","sequence":"additional","affiliation":[{"name":"Division of Pulmonary and Critical Care Medicine, Department of Medicine, Washington University School of Medicine, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Philip","family":"Payne","sequence":"additional","affiliation":[{"name":"Department of Medicine, Washington University School of Medicine, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"David K.","family":"Warren","sequence":"additional","affiliation":[{"name":"Division of Infectious Diseases, Department of Medicine, Washington University School of Medicine, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Victoria J.","family":"Fraser","sequence":"additional","affiliation":[{"name":"Department of Medicine, Washington University School of Medicine, St Louis, Missouri"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"10","published-online":{"date-parts":[[2025,7,2]]},"reference":[{"issue":"8","key":"zoi250584r1","doi-asserted-by":"publisher","first-page":"487","DOI":"10.1136\/bmjqs-2023-016831","article-title":"Evaluation of hospital-onset bacteraemia and fungaemia in the USA as a potential healthcare quality measure: a cross-sectional study.","volume":"33","author":"Leekha","year":"2024","journal-title":"BMJ Qual Saf"},{"issue":"3","key":"zoi250584r2","doi-asserted-by":"publisher","first-page":"358","DOI":"10.1017\/ice.2018.339","article-title":"Preventability of hospital onset bacteremia and fungemia: a pilot study of a potential healthcare-associated infection outcome measure.","volume":"40","author":"Dantes","year":"2019","journal-title":"Infect Control Hosp Epidemiol"},{"key":"zoi250584r3","doi-asserted-by":"publisher","DOI":"10.1017\/ice.2024.38","article-title":"Comparative epidemiology of hospital-onset bloodstream infections (HOBSIs) and central line-associated bloodstream infections (CLABSIs) across a three-hospital health system.","author":"Krishnan","journal-title":"Infect Control Hosp Epidemiol"},{"issue":"10","key":"zoi250584r4","doi-asserted-by":"publisher","first-page":"1317","DOI":"10.1017\/ice.2022.211","article-title":"Hospital-onset bacteremia and fungemia: an evaluation of predictors and feasibility of benchmarking comparing two risk-adjusted models among 267 hospitals.","volume":"43","author":"Yu","year":"2022","journal-title":"Infect Control Hosp Epidemiol"},{"issue":"12","key":"zoi250584r5","doi-asserted-by":"publisher","first-page":"1920","DOI":"10.1017\/ice.2023.132","article-title":"Characteristics, costs, and outcomes associated with central-line-associated bloodstream infection and hospital-onset bacteremia and fungemia in US hospitals.","volume":"44","author":"Yu","year":"2023","journal-title":"Infect Control Hosp Epidemiol"},{"issue":"1","key":"zoi250584r6","doi-asserted-by":"publisher","first-page":"118","DOI":"10.1186\/s13613-020-00713-4","article-title":"Expert consensus-based clinical practice guidelines management of intravascular catheters in the intensive care unit.","volume":"10","author":"Timsit","year":"2020","journal-title":"Ann Intensive Care"},{"issue":"10","key":"zoi250584r7","doi-asserted-by":"publisher","first-page":"1540","DOI":"10.1017\/ice.2023.138","article-title":"Executive summary: a compendium of strategies to prevent healthcare-associated infections in acute-care hospitals: 2022 updates.","volume":"44","author":"Yokoe","year":"2023","journal-title":"Infect Control Hosp Epidemiol"},{"issue":"5","key":"zoi250584r8","doi-asserted-by":"publisher","first-page":"e39","DOI":"10.1016\/j.ejim.2011.02.004","article-title":"Risk factors and mortality for nosocomial bloodstream infections in elderly patients.","volume":"22","author":"Reunes","year":"2011","journal-title":"Eur J Intern Med"},{"issue":"1","key":"zoi250584r9","doi-asserted-by":"publisher","first-page":"26","DOI":"10.1016\/j.jhin.2011.01.018","article-title":"Catheter-associated bloodstream infection incidence and risk factors in adults with cancer: a prospective cohort study.","volume":"78","author":"Mollee","year":"2011","journal-title":"J Hosp Infect"},{"issue":"4","key":"zoi250584r10","doi-asserted-by":"publisher","first-page":"479","DOI":"10.1017\/ice.2018.12","article-title":"Hospital-onset MRSA bacteremia rates are significantly correlated with sociodemographic factors: a step toward risk adjustment.","volume":"39","author":"Freeman","year":"2018","journal-title":"Infect Control Hosp Epidemiol"},{"issue":"4","key":"zoi250584r11","doi-asserted-by":"publisher","first-page":"290","DOI":"10.1016\/j.idh.2023.06.001","article-title":"Risk of organism acquisition from prior room occupants: an updated systematic review.","volume":"28","author":"Mitchell","year":"2023","journal-title":"Infect Dis Health"},{"key":"zoi250584r12","doi-asserted-by":"publisher","first-page":"297","DOI":"10.2147\/CLEP.S124382","article-title":"Transmission of health care-associated infections from roommates and prior room occupants: a systematic review.","volume":"9","author":"Cohen","year":"2017","journal-title":"Clin Epidemiol"},{"issue":"5","key":"zoi250584r13","doi-asserted-by":"publisher","first-page":"541","DOI":"10.1017\/ice.2018.22","article-title":"Association between healthcare-associated infection and exposure to hospital roommates and previous bed occupants with the same organism.","volume":"39","author":"Cohen","year":"2018","journal-title":"Infect Control Hosp Epidemiol"},{"issue":"12","key":"zoi250584r14","doi-asserted-by":"publisher","first-page":"1801","DOI":"10.1001\/jamainternmed.2016.6193","article-title":"Receipt of antibiotics in hospitalized patients and risk for clostridium difficile infection in subsequent patients who occupy the same bed.","volume":"176","author":"Freedberg","year":"2016","journal-title":"JAMA Intern Med"},{"issue":"11","key":"zoi250584r15","doi-asserted-by":"publisher","DOI":"10.1001\/jamanetworkopen.2024.43059","article-title":"Nurse burnout and patient safety, satisfaction, and quality of care: a systematic review and meta-analysis.","volume":"7","author":"Li","year":"2024","journal-title":"JAMA Netw Open"},{"issue":"3","key":"zoi250584r19","doi-asserted-by":"publisher","first-page":"647","DOI":"10.1007\/s10115-013-0679-x","article-title":"Explaining prediction models and individual predictions with feature contributions.","volume":"41","author":"\u0160trumbelj","year":"2014","journal-title":"Knowl Inf Syst"},{"issue":"9","key":"zoi250584r20","doi-asserted-by":"publisher","first-page":"889","DOI":"10.1007\/s10654-021-00794-w","article-title":"Prediction or causality? A scoping review of their conflation within current observational research.","volume":"36","author":"Ramspek","year":"2021","journal-title":"Eur J Epidemiol"},{"issue":"10","key":"zoi250584r21","doi-asserted-by":"publisher","DOI":"10.1161\/CIRCOUTCOMES.120.006556","article-title":"Recommendations for reporting machine learning analyses in clinical research.","volume":"13","author":"Stevens","year":"2020","journal-title":"Circ Cardiovasc Qual Outcomes"},{"issue":"8","key":"zoi250584r23","doi-asserted-by":"publisher","first-page":"573","DOI":"10.7326\/0003-4819-147-8-200710160-00010","article-title":"The Strengthening the Reporting of Observational Studies in Epidemiology (STROBE) statement: guidelines for reporting observational studies.","volume":"147","author":"von Elm","year":"2007","journal-title":"Ann Intern Med"},{"issue":"5","key":"zoi250584r25","doi-asserted-by":"publisher","first-page":"836","DOI":"10.1007\/s00134-007-0559-5","article-title":"Single rooms may help to prevent nosocomial bloodstream infection and cross-transmission of methicillin-resistant Staphylococcus aureus in intensive care units.","volume":"33","author":"Bracco","year":"2007","journal-title":"Intensive Care Med"},{"issue":"18","key":"zoi250584r26","doi-asserted-by":"publisher","first-page":"1945","DOI":"10.1001\/archinte.166.18.1945","article-title":"Risk of acquiring antibiotic-resistant bacteria from prior room occupants.","volume":"166","author":"Huang","year":"2006","journal-title":"Arch Intern Med"},{"issue":"3","key":"zoi250584r27","doi-asserted-by":"publisher","first-page":"201","DOI":"10.1086\/658669","article-title":"Evaluation of hospital room assignment and acquisition of Clostridium difficile infection.","volume":"32","author":"Shaughnessy","year":"2011","journal-title":"Infect Control Hosp Epidemiol"},{"issue":"1","key":"zoi250584r28","doi-asserted-by":"publisher","first-page":"32","DOI":"10.1093\/cid\/cit668","article-title":"Relationships between the importation, transmission, and nosocomial infections of methicillin-resistant Staphylococcus aureus: an observational study of 112 Veterans Affairs Medical Centers.","volume":"58","author":"Jones","year":"2014","journal-title":"Clin Infect Dis"},{"issue":"1","key":"zoi250584r29","doi-asserted-by":"publisher","first-page":"3052","DOI":"10.1038\/s41467-022-30637-5","article-title":"Whole genome sequencing reveals hidden transmission of carbapenemase-producing Enterobacterales.","volume":"13","author":"Marimuthu","year":"2022","journal-title":"Nat Commun"},{"issue":"1","key":"zoi250584r30","doi-asserted-by":"publisher","first-page":"4139","DOI":"10.1038\/s41598-020-60659-2","article-title":"A prolonged multispecies outbreak of IMP-6 carbapenemase-producing Enterobacterales due to horizontal transmission of the IncN plasmid.","volume":"10","author":"Yamagishi","year":"2020","journal-title":"Sci Rep"},{"issue":"7","key":"zoi250584r31","doi-asserted-by":"publisher","first-page":"801","DOI":"10.1016\/j.ajic.2024.02.013","article-title":"The outbreak of multispecies carbapenemase-producing Enterobacterales associated with pediatric ward sinks: IncM1 plasmids act as vehicles for cross-species transmission.","volume":"52","author":"Tsukada","year":"2024","journal-title":"Am J Infect Control"},{"issue":"2","key":"zoi250584r32","doi-asserted-by":"publisher","DOI":"10.1128\/spectrum.04478-22","article-title":"Global increase of antibiotic resistance genes in conjugative plasmids.","volume":"11","author":"Wang","year":"2023","journal-title":"Microbiol Spectr"},{"issue":"4","key":"zoi250584r33","doi-asserted-by":"publisher","first-page":"626","DOI":"10.1001\/jamainternmed.2014.8273","article-title":"Hospital ward antibiotic prescribing and the risks of Clostridium difficile infection.","volume":"175","author":"Brown","year":"2015","journal-title":"JAMA Intern Med"},{"issue":"4","key":"zoi250584r34","doi-asserted-by":"publisher","DOI":"10.1002\/14651858.CD007019.pub3","article-title":"Hospital nurse-staffing models and patient- and staff-related outcomes.","volume":"4","author":"Butler","year":"2019","journal-title":"Cochrane Database Syst Rev"},{"issue":"5","key":"zoi250584r35","doi-asserted-by":"publisher","first-page":"279","DOI":"10.1097\/MLR.0000000000001843","article-title":"Nurse staffing level, length of work experience, and risk of health care-associated infections among hospital patients: a prospective record linkage study.","volume":"61","author":"Peutere","year":"2023","journal-title":"Med Care"},{"issue":"5","key":"zoi250584r36","doi-asserted-by":"publisher","first-page":"260","DOI":"10.1097\/NNA.0000000000000748","article-title":"Nurse staffing and healthcare-associated infection, unit-level analysis.","volume":"49","author":"Shang","year":"2019","journal-title":"J Nurs Adm"},{"issue":"12","key":"zoi250584r38","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0052342","article-title":"Nursing workload as a risk factor for healthcare associated infections in ICU: a prospective study.","volume":"7","author":"Daud-Gallotti","year":"2012","journal-title":"PLoS One"},{"key":"zoi250584r39","doi-asserted-by":"publisher","first-page":"397","DOI":"10.1146\/annurev.psych.52.1.397","article-title":"Job burnout.","volume":"52","author":"Maslach","year":"2001","journal-title":"Annu Rev Psychol"},{"key":"zoi250584r17","author":"Chen","year":"2016"},{"key":"zoi250584r18","doi-asserted-by":"crossref","first-page":"58","DOI":"10.1007\/978-3-031-63219-8_5","volume-title":"Artificial Intelligence Applications and Innovations","author":"Kiriakidou","year":"2024"},{"key":"zoi250584r16","unstructured":"CDC NHSN Bloodstream Infection Event (Central Line-Associated Bloodstream Infection and Non-central Line Associated Bloodstream Infection). January 2024. Accessed May 12, 2025. https:\/\/www.cdc.gov\/nhsn\/pdfs\/pscmanual\/4psc_clabscurrent.pdf"},{"key":"zoi250584r22","unstructured":"Pineau? J, Vincent-Lamarre? P, Sinha? K, . Improving reproducibility in machine learning research (a report from the NeurIPS 2019 Reproducibility Program). arXiv. Preprint posted online December 30, 2020. doi:10.48550\/arXiv.2003.12206"},{"key":"zoi250584r24","unstructured":"Centers for Disease Control and Prevention. Intravascular catheter-related infection (BSI) prevention guidelines. References. Accessed May 23, 2025. https:\/\/www.cdc.gov\/infection-control\/hcp\/intravascular-catheter-related-infection\/references.html"},{"key":"zoi250584r37","unstructured":"Sen. Brown S [D O. Text - S.1567 - 117th Congress (2021-2022): Nurse Staffing Standards for Hospital Patient Safety and Quality Care Act of 2021. May 11, 2021. Accessed November 25, 2024. https:\/\/www.congress.gov\/bill\/117th-congress\/senate-bill\/1567\/text"}],"container-title":["JAMA Network Open"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/jamanetwork.com\/journals\/jamanetworkopen\/articlepdf\/2835883\/vazquez_guillamet_2025_oi_250584_1754402045.34333.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,8,6]],"date-time":"2025-08-06T15:00:47Z","timestamp":1754492447000},"score":1,"resource":{"primary":{"URL":"https:\/\/jamanetwork.com\/journals\/jamanetworkopen\/fullarticle\/2835883"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,7,2]]},"references-count":39,"journal-issue":{"issue":"7","published-print":{"date-parts":[[2025,7,1]]}},"URL":"https:\/\/doi.org\/10.1001\/jamanetworkopen.2025.18815","relation":{},"ISSN":["2574-3805"],"issn-type":[{"value":"2574-3805","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,7,2]]}}}