{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,28]],"date-time":"2026-05-28T02:15:16Z","timestamp":1779934516553,"version":"3.53.1"},"reference-count":78,"publisher":"Wiley","issue":"1","license":[{"start":{"date-parts":[[2016,12,27]],"date-time":"2016-12-27T00:00:00Z","timestamp":1482796800000},"content-version":"vor","delay-in-days":361,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"}],"content-domain":{"domain":["asistdl.onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Proc. Assoc. Info. Sci. Tech."],"published-print":{"date-parts":[[2016,1]]},"abstract":"<jats:title>ABSTRACT<\/jats:title>\n                  <jats:p>Scientific software is as important to scientific studies as raw data. Yet, attention to this genre of research data is limited in studies on data reuse, citation, and metadata standards. This paper presents results from an exploratory study that examined how scientific software's reuse information is presented in the current citation practice and natural language descriptions in research papers. We selected LAMMPS, popular simulation software used in material science, for this study. Both descriptive metadata elements and the types of reuse are examined from a sample of 400 research papers. The results indicate that both descriptive metadata elements and reuse types about LAMMPS are presented in incomplete and inconsistent ways, and this interferes with the values of scientific software, as a type of research data. Our findings necessitate future studies on the metadata standards to facilitate the identification of information related with scientific software reuse.<\/jats:p>","DOI":"10.1002\/pra2.2016.14505301072","type":"journal-article","created":{"date-parts":[[2016,12,27]],"date-time":"2016-12-27T06:08:13Z","timestamp":1482818893000},"page":"1-10","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":17,"title":["Software citation, reuse and metadata considerations: An exploratory study examining LAMMPS"],"prefix":"10.1002","volume":"53","author":[{"given":"Kai","family":"Li","sequence":"first","affiliation":[{"name":"College of Computing and Informatics Drexel University 3141 Chestnut Street Philadelphia PA 19104"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xia","family":"Lin","sequence":"additional","affiliation":[{"name":"College of Computing and Informatics Drexel University 3141 Chestnut Street Philadelphia PA 19104"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jane","family":"Greenberg","sequence":"additional","affiliation":[{"name":"College of Computing and Informatics Drexel University 3141 Chestnut Street Philadelphia PA 19104"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2016,12,27]]},"reference":[{"key":"e_1_2_8_2_1","doi-asserted-by":"publisher","DOI":"10.1021\/nl9023885"},{"key":"e_1_2_8_3_1","unstructured":"Ahalt S. Couch A. Ibanez L. &Ray Idaszak R.(2015).NSF Workshop on Supporting Scientific Discovery through Norms and Practices for Software and Data Citation and Attribution."},{"key":"e_1_2_8_4_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jcp.2008.01.047"},{"key":"e_1_2_8_5_1","unstructured":"Ball A.(2009).Scientific Data Application Profile Scoping Study Report. Retrieved fromhttp:\/\/www.ukoln.ac.uk\/projects\/sdapss\/papers\/ball2009sda-v11.pdf"},{"key":"e_1_2_8_6_1","doi-asserted-by":"publisher","DOI":"10.1039\/a809733j"},{"key":"e_1_2_8_7_1","doi-asserted-by":"publisher","DOI":"10.1002\/asi.22634"},{"key":"e_1_2_8_8_1","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevB.42.9458"},{"key":"e_1_2_8_9_1","doi-asserted-by":"publisher","DOI":"10.1063\/1.2794884"},{"key":"e_1_2_8_10_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.actamat.2008.05.044"},{"key":"e_1_2_8_11_1","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevB.74.214108"},{"key":"e_1_2_8_12_1","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevB.76.024113"},{"key":"e_1_2_8_13_1","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevB.77.195429"},{"key":"e_1_2_8_14_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1083-6101.2007.00342.x"},{"key":"e_1_2_8_15_1","unstructured":"Citing LAMMPS in your papers. (n.d.). Retrieved March 17 2016 fromhttp:\/\/lammps.sandia.gov\/cite.html"},{"key":"e_1_2_8_16_1","doi-asserted-by":"publisher","DOI":"10.1109\/MCSE.2013.133"},{"key":"e_1_2_8_17_1","unstructured":"Curty R.(2015).Beyond \u201cData Thrifting\u201d: An Investigation of Factors Influencing Research Data Reuse In the Social Sciences. Dissertations \u2010 ALL. Retrieved fromhttp:\/\/surface.syr.edu\/etd\/266"},{"key":"e_1_2_8_18_1","unstructured":"DataCite International Data Citation Metadata Working Group & others. (2015).DataCite metadata schema for the publication and citation of research data version 3.1. Retrieved fromhttps:\/\/schema.datacite.org\/meta\/kernel-3\/doc\/DataCite-MetadataKernel_v3.1.pdf"},{"key":"e_1_2_8_19_1","doi-asserted-by":"publisher","DOI":"10.1039\/b927061m"},{"key":"e_1_2_8_20_1","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevLett.50.1285"},{"key":"e_1_2_8_21_1","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevB.29.6443"},{"key":"e_1_2_8_22_1","doi-asserted-by":"crossref","unstructured":"Diamantopoulos N. Sgouropoulou C. Kastrantas K. &Manouselis N.(2011).Developing a metadata application profile for sharing agricultural scientific and scholarly research resources. InResearch Conference on","DOI":"10.1007\/978-3-642-24731-6_45"},{"key":"e_1_2_8_23_1","unstructured":"Metadata and Semantic Research(pp.453\u2013466). Springer. Retrieved fromhttp:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-24731-6_45"},{"key":"e_1_2_8_24_1","doi-asserted-by":"publisher","DOI":"10.1145\/2467696.2467712"},{"key":"e_1_2_8_25_1","doi-asserted-by":"publisher","DOI":"10.1007\/s10606-010-9117-8"},{"key":"e_1_2_8_26_1","doi-asserted-by":"crossref","unstructured":"Faniel I. M. Kriesberg A. &Yakel E.(2015).Social scientists' satisfaction with data reuse.Journal of the Association for Information Science and Technology. Retrieved fromhttp:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/asi.23480\/full","DOI":"10.1002\/asi.23480"},{"key":"e_1_2_8_27_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.infsof.2005.07.001"},{"key":"e_1_2_8_28_1","doi-asserted-by":"publisher","DOI":"10.1109\/MIC.2014.88"},{"key":"e_1_2_8_29_1","doi-asserted-by":"publisher","DOI":"10.1045\/january2016-herterich"},{"key":"e_1_2_8_30_1","volume-title":"The fourth paradigm: data\u2010intensive scientific discovery","author":"Hey A. J.","year":"2009"},{"key":"e_1_2_8_31_1","unstructured":"Hong N. C.(2014).Minimal information for reusable scientific software. In Proceedings of the 2nd Workshop on Working towards Sustainable Scientific Software: Practice and Experience. Retrieved fromhttp:\/\/www.research.ed.ac.uk\/portal\/files\/16773670\/MinimalInfoScientificSoftware.pdf"},{"key":"e_1_2_8_32_1","doi-asserted-by":"publisher","DOI":"10.1145\/2441776.2441825"},{"key":"e_1_2_8_33_1","doi-asserted-by":"publisher","DOI":"10.1038\/nature10836"},{"key":"e_1_2_8_34_1","doi-asserted-by":"publisher","DOI":"10.1021\/jp036842c"},{"key":"e_1_2_8_35_1","doi-asserted-by":"publisher","DOI":"10.1063\/1.2372748"},{"key":"e_1_2_8_36_1","doi-asserted-by":"publisher","DOI":"10.1126\/science.1231535"},{"key":"e_1_2_8_37_1","doi-asserted-by":"publisher","DOI":"10.1006\/jcph.1999.6201"},{"key":"e_1_2_8_38_1","doi-asserted-by":"publisher","DOI":"10.1021\/ma050989f"},{"key":"e_1_2_8_39_1","doi-asserted-by":"crossref","unstructured":"Kratz J. &Strasser C.(2014).Data publication consensus and controversies. F1000Research.http:\/\/doi.org\/10.12688\/f1000research.3979.3","DOI":"10.12688\/f1000research.3979.2"},{"key":"e_1_2_8_40_1","volume-title":"Accommodating Simplicity and Complexity in Metadata: Lessons from theDublin Core Experience","author":"Lagoze C.","year":"2000"},{"key":"e_1_2_8_41_1","unstructured":"LAMMPS History. (n.d.). Retrieved March 17 2016 fromhttp:\/\/lammps.sandia.gov\/history.html"},{"key":"e_1_2_8_42_1","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevB.73.115409"},{"key":"e_1_2_8_43_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.cpc.2008.05.008"},{"key":"e_1_2_8_44_1","unstructured":"Martone M.(2014).Data citation synthesis group: Joint declaration of data citation principles. FORCE11. Retrieved fromhttps:\/\/www.force11.org\/group\/joint-declaration-data-citation-principles-final"},{"key":"e_1_2_8_45_1","doi-asserted-by":"publisher","DOI":"10.1021\/jz201325g"},{"key":"e_1_2_8_46_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.actamat.2009.10.049"},{"key":"e_1_2_8_47_1","doi-asserted-by":"publisher","DOI":"10.1087\/20110204"},{"key":"e_1_2_8_48_1","doi-asserted-by":"publisher","DOI":"10.7710\/2162-3309.1035"},{"key":"e_1_2_8_49_1","doi-asserted-by":"publisher","DOI":"10.1126\/science.1218263"},{"key":"e_1_2_8_50_1","doi-asserted-by":"publisher","DOI":"10.1021\/nl060024p"},{"key":"e_1_2_8_51_1","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevLett.95.255504"},{"key":"e_1_2_8_52_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jmps.2006.03.006"},{"key":"e_1_2_8_53_1","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevB.72.054106"},{"key":"e_1_2_8_54_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.scriptamat.2005.11.064"},{"key":"e_1_2_8_55_1","doi-asserted-by":"publisher","DOI":"10.2481\/dsj.WDS-042"},{"key":"e_1_2_8_56_1","doi-asserted-by":"publisher","DOI":"10.2481\/dsj.4.12"},{"key":"e_1_2_8_57_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.joi.2009.11.010"},{"key":"e_1_2_8_58_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0000308"},{"key":"e_1_2_8_59_1","doi-asserted-by":"publisher","DOI":"10.1006\/jcph.1995.1039"},{"key":"e_1_2_8_60_1","doi-asserted-by":"publisher","DOI":"10.1038\/nrg3394"},{"key":"e_1_2_8_61_1","doi-asserted-by":"publisher","DOI":"10.1063\/1.1826056"},{"key":"e_1_2_8_62_1","doi-asserted-by":"publisher","DOI":"10.7717\/peerj-cs.1"},{"issue":"1","key":"e_1_2_8_63_1","first-page":"9","article-title":"isCitedBy: A metadata scheme for DataCite","volume":"17","author":"Starr J.","year":"2011","journal-title":"D\u2010Lib Magazine"},{"key":"e_1_2_8_64_1","first-page":"5","volume-title":"Cyberinfrastructure Software Sustainability and Reusability: Report from an NSF\u2010funded workshop","author":"Stewart C. A.","year":"2010"},{"key":"e_1_2_8_65_1","doi-asserted-by":"publisher","DOI":"10.1063\/1.481208"},{"key":"e_1_2_8_66_1","unstructured":"Thaney K.(2013).Code as a research object: a new project. Retrieved April 17 2016 fromhttps:\/\/mozillascience.org\/code-as-a-research-object-a-new-project"},{"key":"e_1_2_8_67_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijplas.2007.02.010"},{"key":"e_1_2_8_68_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jmps.2007.11.012"},{"key":"e_1_2_8_69_1","doi-asserted-by":"publisher","DOI":"10.1088\/0965-0393\/15\/7\/001"},{"key":"e_1_2_8_70_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.actamat.2007.03.012"},{"key":"e_1_2_8_71_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.commatsci.2008.03.041"},{"key":"e_1_2_8_72_1","doi-asserted-by":"publisher","DOI":"10.1063\/1.2194019"},{"key":"e_1_2_8_73_1","first-page":"157","volume-title":"The Dryad data repository: A Singapore framework metadata architecture in a DSpace environment","author":"White H. C.","year":"2008"},{"key":"e_1_2_8_74_1","doi-asserted-by":"publisher","DOI":"10.1002\/asi.22683"},{"key":"e_1_2_8_75_1","unstructured":"Wilson G. Aruliah D. A. Brown C. T. Chue Hong N. P. Davis M. Guy R. T. \u2026 others. (2012).Best practices for scientific computing. arXiv Preprint arXiv:1210.0530. Retrieved fromhttp:\/\/journals.plos.org\/plosbiology\/article?id=10.1371\/journal.pbio.1001745"},{"key":"e_1_2_8_76_1","doi-asserted-by":"publisher","DOI":"10.1145\/2232817.2232822"},{"key":"e_1_2_8_77_1","doi-asserted-by":"publisher","DOI":"10.1021\/ef060449z"},{"key":"e_1_2_8_78_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00799-007-0015-8"},{"key":"e_1_2_8_79_1","doi-asserted-by":"publisher","DOI":"10.1177\/0162243907306704"}],"container-title":["Proceedings of the Association for Information Science and Technology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1002%2Fpra2.2016.14505301072","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1002%2Fpra2.2016.14505301072","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/asistdl.onlinelibrary.wiley.com\/doi\/pdf\/10.1002\/pra2.2016.14505301072","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,21]],"date-time":"2025-10-21T17:10:41Z","timestamp":1761066641000},"score":1,"resource":{"primary":{"URL":"https:\/\/asistdl.onlinelibrary.wiley.com\/doi\/10.1002\/pra2.2016.14505301072"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016,1]]},"references-count":78,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2016,1]]}},"alternative-id":["10.1002\/pra2.2016.14505301072"],"URL":"https:\/\/doi.org\/10.1002\/pra2.2016.14505301072","archive":["Portico"],"relation":{},"ISSN":["2373-9231","2373-9231"],"issn-type":[{"value":"2373-9231","type":"print"},{"value":"2373-9231","type":"electronic"}],"subject":[],"published":{"date-parts":[[2016,1]]},"assertion":[{"value":"2016-12-27","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}