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Geographic isolation and niche differentiation are key drivers of species divergence.\n                      <jats:italic>Cycas chenii<\/jats:italic>\n                      and\n                      <jats:italic>C. guizhouensis<\/jats:italic>\n                      are morphologically similar sister species from different river basins in Southwest China. Their distinct habitats in nearby river systems make them a potentially good model system for studying species divergence.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Methods<\/jats:title>\n                    <jats:p>\n                      We used double\u2010digest restriction\u2010site\u2010associated DNA sequencing data and analyzed the data with a range of analyses to investigate the genetic divergence of\n                      <jats:italic>C. guizhouensis<\/jats:italic>\n                      and\n                      <jats:italic>C. chenii<\/jats:italic>\n                      and to assess the significance of geographic factors and ecological differentiation in their divergence.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>\n                      The two species had significant genetic differentiation (genetic differentiation index = 0.34). On the basis of phylogenetic and admixture analyses, the two species are genetically distinct lineages that diverged in the early Miocene. They experienced similar demographic histories over the past several million years. The genetic distance between the two species correlated positively with geographic distance but not with environmental distance. In a niche identity test, the ecological niches of the two species were statistically indistinguishable (Schoener's\n                      <jats:italic>D<\/jats:italic>\n                      \u2009=\u20090.68,\n                      <jats:italic>I<\/jats:italic>\n                      \u2009=\u20090.91, both within the null distribution).\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Conclusions<\/jats:title>\n                    <jats:p>\n                      Environmental variation is unlikely to have been the primary factor driving divergence of\n                      <jats:italic>C. chenii<\/jats:italic>\n                      and\n                      <jats:italic>C. guizhouensis<\/jats:italic>\n                      . Geographic separation instead may have been triggered by shifts in river channels during the early Miocene epoch, playing a pivotal role in interspecific differentiation.\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.1002\/ajb2.70270","type":"journal-article","created":{"date-parts":[[2026,9,30]],"date-time":"2026-09-30T06:17:02Z","timestamp":1790749022000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Geographic isolation promoted species divergence of two closely related\n                    <i>Cycas<\/i>\n                    species in distinct river basins"],"prefix":"10.1002","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-3761-5597","authenticated-orcid":false,"given":"Yi\u2010Qing","family":"Wang","sequence":"first","affiliation":[{"name":"Department of Economic Plants and Biotechnology Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese 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