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Yet, the population genomics of the species remains relatively poorly characterized, despite the critical importance of this knowledge in many areas of research including genome\u2010wide association studies, models of polygenic risk scores, and scans for the targets of selection. This neglect owes, at least in part, to two biological peculiarities related to the reproductive mode of the species\u2014frequent twinning and sibling chimerism\u2014which are likely to affect standard population genetic approaches relying on assumptions underlying the Wright\u2013Fisher model. Using high\u2010quality population genomic data, we here infer the rates and landscapes of mutation and recombination\u2014two fundamental processes dictating the levels and patterns of genetic variability\u2014in the presence of these biological features, and discuss our findings in light of recent work in primates. Our results suggest that, while the species exhibits relatively low neutral mutation rates, rates of recombination are in the range of those observed in other anthropoids. Moreover, the recombination landscape of common marmosets, like that of many vertebrates, appears dominated by PRDM9\u2010mediated hotspots, with artificial intelligence\u2010based models predicting an intricate 3D\u2010structure of the species\u2010specific PRDM9\u2010DNA binding complex in silico. Apart from providing novel insights into the population genetics of common marmosets, given the importance of the availability of fine\u2010scale maps of mutation and recombination for evolutionary inference, this work will also serve as a valuable resource to aid future genomic research in this widely studied system.\n                  <\/jats:p>","DOI":"10.1002\/ajp.70208","type":"journal-article","created":{"date-parts":[[2026,10,5]],"date-time":"2026-10-05T11:17:39Z","timestamp":1791199059000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Inferring the Landscapes of Mutation and Recombination in the Common Marmoset (\n                    <i>Callithrix jacchus<\/i>\n                    ) in the Presence of Twinning and Hematopoietic Chimerism"],"prefix":"10.1002","volume":"88","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-9496-9562","authenticated-orcid":false,"given":"Vivak","family":"Soni","sequence":"first","affiliation":[{"name":"School of Life Sciences, Center for Evolution and Medicine Arizona State University Tempe Arizona USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cyril J.","family":"Versoza","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Center for Evolution and Medicine Arizona State University Tempe Arizona USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4786-8064","authenticated-orcid":false,"given":"Jeffrey D.","family":"Jensen","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Center for Evolution and Medicine Arizona State University Tempe Arizona USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1378-2913","authenticated-orcid":false,"given":"Susanne P.","family":"Pfeifer","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Center for Evolution and Medicine Arizona State University Tempe Arizona USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2026,10,5]]},"reference":[{"key":"e_1_2_10_2_1","doi-asserted-by":"publisher","DOI":"10.1038\/nature09534"},{"key":"e_1_2_10_3_1","doi-asserted-by":"publisher","DOI":"10.1038\/nature15393"},{"key":"e_1_2_10_4_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-024-07487-w"},{"key":"e_1_2_10_5_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0022-2836(05)80360-2"},{"key":"e_1_2_10_6_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-019-45839-z"},{"key":"e_1_2_10_7_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-020-2871-y"},{"key":"e_1_2_10_8_1","doi-asserted-by":"publisher","DOI":"10.1126\/science.1216872"},{"key":"e_1_2_10_9_1","doi-asserted-by":"publisher","DOI":"10.1101\/gr.6386707"},{"key":"e_1_2_10_10_1","unstructured":"Auton A. 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