{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,18]],"date-time":"2026-08-18T14:24:01Z","timestamp":1787063041060,"version":"build-2736575974"},"reference-count":60,"publisher":"Wiley","issue":"2","license":[{"start":{"date-parts":[[2017,12,29]],"date-time":"2017-12-29T00:00:00Z","timestamp":1514505600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"}],"funder":[{"DOI":"10.13039\/501100000925","name":"National Health and Medical Research Council","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100000925","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100000341","name":"Arthritis Research UK","doi-asserted-by":"publisher","award":["20522"],"award-info":[{"award-number":["20522"]}],"id":[{"id":"10.13039\/501100000341","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Arthritis &amp; Rheumatology"],"published-print":{"date-parts":[[2018,2]]},"abstract":"<jats:sec>\n                    <jats:title>Objective<\/jats:title>\n                    <jats:p>\n                      Endoplasmic reticulum aminopeptidase 1 (\n                      <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                      \u20101) and\n                      <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                      \u20102\n                      <jats:italic>,<\/jats:italic>\n                      encoded on chromosome 5q15, trim endogenous peptides for\n                      <jats:styled-content style=\"fixed-case\">HLA<\/jats:styled-content>\n                      \u2010mediated presentation to the immune system. Polymorphisms in\n                      <jats:italic>\n                        <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                        1\n                      <\/jats:italic>\n                      and\/or\n                      <jats:italic>\n                        <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                        2\n                      <\/jats:italic>\n                      are strongly associated with several immune\u2010mediated diseases with specific\n                      <jats:styled-content style=\"fixed-case\">HLA<\/jats:styled-content>\n                      backgrounds, implicating altered peptide handling and presentation as prerequisites for autoreactivity against an arthritogenic peptide. Given the thorough characterization of disease risk\u2013associated polymorphisms that alter\n                      <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                      activity, this study aimed instead to interrogate the expression effect of chromosome 5q15 polymorphisms to determine their effect on\n                      <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                      isoform and protein expression.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Methods<\/jats:title>\n                    <jats:p>\n                      <jats:styled-content style=\"fixed-case\">RNA<\/jats:styled-content>\n                      sequencing and genotyping across chromosome 5q15 were performed to detect genetic variants in\n                      <jats:italic>\n                        <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                        1\n                      <\/jats:italic>\n                      and\n                      <jats:italic>\n                        <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                        2\n                      <\/jats:italic>\n                      associated with altered total gene and isoform\u2010specific expression. The functional implication of a putative messenger\n                      <jats:styled-content style=\"fixed-case\">RNA<\/jats:styled-content>\n                      splice\u2010altering variant on\n                      <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                      \u20101 protein levels was validated using mass spectrometry.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>\n                      Polymorphisms associated with ankylosing spondylitis (\n                      <jats:styled-content style=\"fixed-case\">AS<\/jats:styled-content>\n                      ) significantly influenced the transcript and protein expression of ERAP\u20101 and ERAP\u20102. Disease risk\u2013associated polymorphisms in and around both genes were also associated with increased gene expression. Furthermore, key risk\u2010associated\n                      <jats:italic>\n                        <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                        1\n                      <\/jats:italic>\n                      variants were associated with altered transcript splicing, leading to allele\u2010dependent alternate expression of 2 distinct isoforms and significant differences in the type of\n                      <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                      \u20101 protein produced.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Conclusion<\/jats:title>\n                    <jats:p>\n                      In accordance with studies demonstrating that polymorphisms that increase aminopeptidase activity predispose to immune disease, the increased risk also attributed to increased expression of\n                      <jats:italic>\n                        <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                        1\n                      <\/jats:italic>\n                      and\n                      <jats:italic>\n                        <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                        2\n                      <\/jats:italic>\n                      supports the notion of using aminopeptidase inhibition to treat\n                      <jats:styled-content style=\"fixed-case\">AS<\/jats:styled-content>\n                      and other\n                      <jats:styled-content style=\"fixed-case\">ERAP<\/jats:styled-content>\n                      \u2010associated conditions.\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.1002\/art.40369","type":"journal-article","created":{"date-parts":[[2017,11,6]],"date-time":"2017-11-06T12:46:42Z","timestamp":1509972402000},"page":"255-265","source":"Crossref","is-referenced-by-count":62,"title":["Genetic Variants in\n                    <i>\n                      <scp>ERAP<\/scp>\n                      1\n                    <\/i>\n                    and\n                    <i>\n                      <scp>ERAP<\/scp>\n                      2\n                    <\/i>\n                    Associated With Immune\u2010Mediated Diseases Influence Protein Expression and the Isoform Profile"],"prefix":"10.1002","volume":"70","author":[{"given":"Aimee L.","family":"Hanson","sequence":"first","affiliation":[{"name":"University of Queensland Princess Alexandra Hospital Brisbane Queensland Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Thomas","family":"Cuddihy","sequence":"additional","affiliation":[{"name":"University of Queensland Princess Alexandra Hospital Brisbane Queensland Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Katelin","family":"Haynes","sequence":"additional","affiliation":[{"name":"University of Queensland Princess Alexandra Hospital Brisbane Queensland Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dorothy","family":"Loo","sequence":"additional","affiliation":[{"name":"University of Queensland Princess Alexandra Hospital Brisbane Queensland Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Craig J.","family":"Morton","sequence":"additional","affiliation":[{"name":"St. Vincent's Institute of Medical Research Fitzroy Victoria Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Udo","family":"Oppermann","sequence":"additional","affiliation":[{"name":"University of Oxford Oxford UK"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Paul","family":"Leo","sequence":"additional","affiliation":[{"name":"Queensland University of Technology and Princess Alexandra Hospital Brisbane Queensland Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gethin P.","family":"Thomas","sequence":"additional","affiliation":[{"name":"University of Queensland Princess Alexandra Hospital Brisbane Queensland Australia"},{"name":"Charles Sturt University Wagga Wagga New South Wales Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kim\u2010Anh","family":"L\u00ea Cao","sequence":"additional","affiliation":[{"name":"University of Queensland Princess Alexandra Hospital Brisbane Queensland Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tony J.","family":"Kenna","sequence":"additional","affiliation":[{"name":"Queensland University of Technology and Princess Alexandra Hospital Brisbane Queensland Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Matthew A.","family":"Brown","sequence":"additional","affiliation":[{"name":"Queensland University of Technology and Princess Alexandra Hospital Brisbane Queensland Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2017,12,29]]},"reference":[{"key":"e_1_2_7_2_1","doi-asserted-by":"publisher","DOI":"10.1038\/ng.873"},{"key":"e_1_2_7_3_1","doi-asserted-by":"publisher","DOI":"10.1038\/ng.2007.17"},{"key":"e_1_2_7_4_1","doi-asserted-by":"publisher","DOI":"10.1038\/ng.694"},{"key":"e_1_2_7_5_1","doi-asserted-by":"publisher","DOI":"10.1038\/ng.717"},{"key":"e_1_2_7_6_1","doi-asserted-by":"publisher","DOI":"10.1038\/ng.2520"},{"key":"e_1_2_7_7_1","doi-asserted-by":"publisher","DOI":"10.1038\/ncomms8146"},{"key":"e_1_2_7_8_1","doi-asserted-by":"publisher","DOI":"10.1038\/ng.2667"},{"key":"e_1_2_7_9_1","doi-asserted-by":"publisher","DOI":"10.1038\/ng.513"},{"key":"e_1_2_7_10_1","doi-asserted-by":"publisher","DOI":"10.1038\/ng.3528"},{"key":"e_1_2_7_11_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1001195"},{"key":"e_1_2_7_12_1","doi-asserted-by":"publisher","DOI":"10.3109\/08916934.2013.819855"},{"key":"e_1_2_7_13_1","doi-asserted-by":"publisher","DOI":"10.1093\/hmg\/ddp371"},{"key":"e_1_2_7_14_1","doi-asserted-by":"publisher","DOI":"10.1007\/BF00223548"},{"key":"e_1_2_7_15_1","doi-asserted-by":"publisher","DOI":"10.4049\/jimmunol.1200918"},{"key":"e_1_2_7_16_1","doi-asserted-by":"publisher","DOI":"10.1002\/art.38980"},{"key":"e_1_2_7_17_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jaut.2016.12.008"},{"key":"e_1_2_7_18_1","doi-asserted-by":"publisher","DOI":"10.1074\/mcp.M112.019588"},{"key":"e_1_2_7_19_1","doi-asserted-by":"publisher","DOI":"10.1136\/annrheumdis-2014-206996"},{"key":"e_1_2_7_20_1","doi-asserted-by":"publisher","DOI":"10.1136\/annrheumdis-2011-200347"},{"key":"e_1_2_7_21_1","doi-asserted-by":"publisher","DOI":"10.4049\/jimmunol.1002653"},{"key":"e_1_2_7_22_1","doi-asserted-by":"publisher","DOI":"10.1074\/mcp.M116.066241"},{"key":"e_1_2_7_23_1","doi-asserted-by":"publisher","DOI":"10.1002\/art.39072"},{"key":"e_1_2_7_24_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1001157"},{"key":"e_1_2_7_25_1","doi-asserted-by":"publisher","DOI":"10.1002\/art.39734"},{"key":"e_1_2_7_26_1","doi-asserted-by":"publisher","DOI":"10.1074\/mcp.M114.039214"},{"key":"e_1_2_7_27_1","doi-asserted-by":"publisher","DOI":"10.1002\/art.1780270401"},{"key":"e_1_2_7_28_1","doi-asserted-by":"publisher","DOI":"10.1086\/519795"},{"key":"e_1_2_7_29_1","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.1785"},{"key":"e_1_2_7_30_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1000529"},{"key":"e_1_2_7_31_1","doi-asserted-by":"publisher","DOI":"10.1186\/gb-2013-14-4-r36"},{"key":"e_1_2_7_32_1","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.1923"},{"key":"e_1_2_7_33_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu638"},{"key":"e_1_2_7_34_1","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.1621"},{"key":"e_1_2_7_35_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-12-323"},{"key":"e_1_2_7_36_1","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-014-0550-8"},{"key":"e_1_2_7_37_1","volume-title":"R: a language and environment for statistical computing","author":"Team RC","year":"2015"},{"key":"e_1_2_7_38_1","unstructured":"BatesD MaechlerM BolkerB WalkerS.lme4: linear mixed\u2010effects models using Eigen and S4. R package version 1.1.\u20108.2015."},{"key":"e_1_2_7_39_1","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1111\/j.2517-6161.1995.tb02031.x","article-title":"Controlling the false discovery rate: a practical and powerful approach to multiple testing","volume":"57","author":"Beniamini Y","year":"1995","journal-title":"J Royal Sat Soc"},{"key":"e_1_2_7_40_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btq054"},{"key":"e_1_2_7_41_1","doi-asserted-by":"publisher","DOI":"10.1038\/nprot.2015.053"},{"key":"e_1_2_7_42_1","doi-asserted-by":"publisher","DOI":"10.1002\/art.38249"},{"key":"e_1_2_7_43_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1408882111"},{"key":"e_1_2_7_44_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1621184114"},{"key":"e_1_2_7_45_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1618856114"},{"key":"e_1_2_7_46_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1501475112"},{"key":"e_1_2_7_47_1","doi-asserted-by":"publisher","DOI":"10.1038\/nrg3502"},{"key":"e_1_2_7_48_1","doi-asserted-by":"publisher","DOI":"10.1038\/ng2109"},{"key":"e_1_2_7_49_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0889-857X(21)00705-5"},{"key":"e_1_2_7_50_1","doi-asserted-by":"publisher","DOI":"10.2217\/ijr.12.84"},{"key":"e_1_2_7_51_1","doi-asserted-by":"publisher","DOI":"10.1093\/oxfordjournals.jbchem.a022371"},{"key":"e_1_2_7_52_1","doi-asserted-by":"publisher","DOI":"10.1093\/oxfordjournals.jbchem.a002977"},{"key":"e_1_2_7_53_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkv1157"},{"key":"e_1_2_7_54_1","doi-asserted-by":"publisher","DOI":"10.1111\/cei.12575"},{"key":"e_1_2_7_55_1","doi-asserted-by":"publisher","DOI":"10.1101\/gad.1792809"},{"key":"e_1_2_7_56_1","unstructured":"National Center for Biotechnology Information.NCBI Human Genome Browser. US National Library of Medicine;2015."},{"key":"e_1_2_7_57_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1101262108"},{"key":"e_1_2_7_58_1","doi-asserted-by":"publisher","DOI":"10.1038\/nsmb.2021"},{"key":"e_1_2_7_59_1","unstructured":"University of California Santa Cruz (UCSC).UCSC Genome Browser: Vertebrate Multiz Alignment & Conservation (100 Species).2015."},{"key":"e_1_2_7_60_1","doi-asserted-by":"publisher","DOI":"10.1136\/ard.2009.111690"},{"key":"e_1_2_7_61_1","doi-asserted-by":"publisher","DOI":"10.3899\/jrheum.100469"}],"container-title":["Arthritis &amp; Rheumatology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1002%2Fart.40369","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1002\/art.40369","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/full-xml\/10.1002\/art.40369","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/acrjournals.onlinelibrary.wiley.com\/doi\/pdf\/10.1002\/art.40369","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,8]],"date-time":"2025-10-08T19:49:51Z","timestamp":1759952991000},"score":1,"resource":{"primary":{"URL":"https:\/\/acrjournals.onlinelibrary.wiley.com\/doi\/10.1002\/art.40369"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,12,29]]},"references-count":60,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2018,2]]}},"alternative-id":["10.1002\/art.40369"],"URL":"https:\/\/doi.org\/10.1002\/art.40369","archive":["Portico"],"relation":{},"ISSN":["2326-5191","2326-5205"],"issn-type":[{"value":"2326-5191","type":"print"},{"value":"2326-5205","type":"electronic"}],"subject":[],"published":{"date-parts":[[2017,12,29]]}}}