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Various host traits, including taxonomy, diet, social behaviour, and external factors such as prey availability and the local environment, all play an important role in shaping composition and diversity of the gut microbiogta. In this study, we explored the impact of intestinal microorganisms on the host in adapting to their respective ecological niches in two species of snakes. We collected feces from <jats:italic>Lycodon rufozonatus<\/jats:italic> and <jats:italic>Lycodon rosozonatus<\/jats:italic> from different geographical locations and used 16S rRNA gene sequencing technology to sequence the v3\u2010v4 region. The results revealed that there was no significant difference in the alpha diversity of intestinal microorganisms between <jats:italic>L. rufozonatus<\/jats:italic> and <jats:italic>L. rosozonatus<\/jats:italic>. The gut microbiota of all individuals comprised four main phyla: Pseudomonadota, Bacteroidota, Bacillota, and Actinomycetota. At the genus level, the genus <jats:italic>Salmonella<\/jats:italic> dominated the enterobacterial microbiota in the samples from Hainan, while there was no obvious dominant genus in the enterobacterial microbiota of the samples from the other four localities. Comparative analysis of enzyme families annotated to the gut microbiota between <jats:italic>L. rufozonatus<\/jats:italic> and <jats:italic>L. rosozonatus<\/jats:italic> from the four sampling regions by CAZy carbohydrate annotation revealed that nine enzyme families differed significantly in terms of glycoside hydrolases (GHs). In addition, we compared the composition of gut microbial communities between <jats:italic>L. rufozonatus<\/jats:italic> and <jats:italic>L. rosozonatus<\/jats:italic> and investigated the impact of the differences on their functions. Our results will provide insights into the coevolution of host and gut microbes.<\/jats:p>","DOI":"10.1002\/ece3.70480","type":"journal-article","created":{"date-parts":[[2024,10,23]],"date-time":"2024-10-23T00:38:57Z","timestamp":1729643937000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":5,"title":["Comparative Analyses of <i>Lycodon rufozonatus<\/i> and <i>Lycodon rosozonatus<\/i> Gut Microbiota in Different Regions"],"prefix":"10.1002","volume":"14","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-1570-2967","authenticated-orcid":false,"given":"Fei","family":"Zhu","sequence":"first","affiliation":[{"name":"School of Life Sciences Guizhou Normal University  Guiyang Guizhou China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0003-9859-5486","authenticated-orcid":false,"given":"Ke","family":"Sun","sequence":"additional","affiliation":[{"name":"School of Life Sciences Guizhou 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