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Most studies on the codiversification of carpenter ants (genus\n                    <jats:italic>Camponotus<\/jats:italic>\n                    ) have focused on the co\u2010phylogeny of hosts and endosymbionts across multiple species; however, no studies have examined the intraspecific population\u2010level phylogeographic patterns of codiversification within\n                    <jats:italic>Camponotus<\/jats:italic>\n                    . California has been a geographic focus for phylogeographic studies due to its high endemism and complex geographic structure, and\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>Camponotus laevigatus<\/jats:italic>\n                    <\/jats:styled-content>\n                    is a carpenter ant primarily found there. Here, we used whole\u2010genome sequencing from\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>C. laevigatus<\/jats:italic>\n                    <\/jats:styled-content>\n                    and its endosymbiont,\n                    <jats:italic>Blochmanniella<\/jats:italic>\n                    , to investigate phylogeographic patterns of host\u2010endosymbiont codiversification and estimated kinship of ants sampled near one another. We identified three phylogeographic clusters, and isolation\u2010by\u2010distance analyzes indicated a positive relationship between genetic and geographic distance in\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>C. laevigatus<\/jats:italic>\n                    <\/jats:styled-content>\n                    and\n                    <jats:italic>Blochmanniella<\/jats:italic>\n                    . Using estimates of effective migration surfaces, we found that the Central Valley in California acts as a barrier to gene flow among populations. Our phylogenetic analyzes revealed the congruent phylogenies of\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>C. laevigatus<\/jats:italic>\n                    <\/jats:styled-content>\n                    and\n                    <jats:italic>Blochmanniella<\/jats:italic>\n                    , supporting codiversification. Our demographic analysis revealed a Pleistocene divergence, highlighting the role of Quaternary climatic cycles in shaping the population structure of\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>C. laevigatus<\/jats:italic>\n                    <\/jats:styled-content>\n                    . Lastly, we also estimated kinship among individuals from the same and nearby sampling sites; kinship results indicated full\u2010sister relationships among individuals from the same sampling site, except for three pairwise comparisons, and foragers from nearby sampling sites displayed some shared kinship.\n                  <\/jats:p>","DOI":"10.1002\/ece3.74045","type":"journal-article","created":{"date-parts":[[2026,7,20]],"date-time":"2026-07-20T23:21:06Z","timestamp":1784589666000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Quaternary Climatic Changes and Biogeographic Barriers Drove Codiversification in the Obligate Mutualism Between\n                    <scp>\n                      <i>Camponotus laevigatus<\/i>\n                    <\/scp>\n                    and Its Endosymbiont\n                    <i>Blochmanniella<\/i>"],"prefix":"10.1002","volume":"16","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-9475-8442","authenticated-orcid":false,"given":"Swapnil S.","family":"Boyane","sequence":"first","affiliation":[{"name":"Department of Biological Sciences Texas Tech University  Lubbock Texas USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Garrett J.","family":"Behrends","sequence":"additional","affiliation":[{"name":"Department of Biological Sciences Texas Tech University  Lubbock Texas USA"},{"name":"Department of Biology University of Missouri\u2013St. Louis  St. Louis Missouri USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2765-7611","authenticated-orcid":false,"given":"Joseph D.","family":"Manthey","sequence":"additional","affiliation":[{"name":"Department of Biological Sciences Texas Tech University  Lubbock Texas USA"},{"name":"Natural Science Research Laboratory Museum of Texas Tech University  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