{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,29]],"date-time":"2026-09-29T01:55:43Z","timestamp":1790646943681,"version":"4.1.0"},"reference-count":59,"publisher":"Wiley","issue":"10","license":[{"start":{"date-parts":[[2026,9,28]],"date-time":"2026-09-28T00:00:00Z","timestamp":1790553600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2026,9,28]],"date-time":"2026-09-28T00:00:00Z","timestamp":1790553600000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/doi.wiley.com\/10.1002\/tdm_license_1.1"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["NSFC 32270477"],"award-info":[{"award-number":["NSFC 32270477"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Ecology and Evolution"],"published-print":{"date-parts":[[2026,10]]},"abstract":"<jats:title>ABSTRACT<\/jats:title>\n                  <jats:p>\n                    Snakes are valuable for studying adaptive evolution due to their morphological specialization, wide distribution, and strong adaptability. However, genomic studies on\n                    <jats:styled-content style=\"fixed-case\">\n                      <jats:italic>Rhabdophis nuchalis<\/jats:italic>\n                    <\/jats:styled-content>\n                    are limited. We resequenced 19 individuals from four regions to assess genetic diversity and adaptation. We obtained 39,226,324 high\u2010quality SNPs and 15,838,348 high\u2010quality INDELs. Genetic structure analysis showed Sichuan and Yunnan populations forming one cluster, and Hubei with Shaanxi another. Yunnan exhibited high nucleotide diversity and observed heterozygosity among the four sampled populations (Sichuan, Shaanxi, Hubei, and Yunnan), indicating substantial genetic diversity. Shaanxi showed low linkage disequilibrium, suggesting a larger effective population size, consistent with historical estimates. GO enrichment revealed differentiated genes related to reproduction and calcium\u2010dependent cell adhesion. KEGG identified only the cell adhesion molecules pathway. BLAST aligned these sequences with protocadherin \u03b2 and \u03b3 subclusters. Overall, clear genetic clustering and differentiation exist among the four populations, with differentiation\u2010related genes involved in reproduction and cell adhesion, providing insights for genetic diversity conservation.\n                  <\/jats:p>","DOI":"10.1002\/ece3.74438","type":"journal-article","created":{"date-parts":[[2026,9,29]],"date-time":"2026-09-29T01:01:02Z","timestamp":1790643662000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Whole\u2010Genome Resequencing Reveals the Genetic Diversity and Adaptive Evolution of\n                    <scp>\n                      <i>Rhabdophis nuchalis<\/i>\n                    <\/scp>"],"prefix":"10.1002","volume":"16","author":[{"given":"Fei","family":"Wu","sequence":"first","affiliation":[{"name":"College of Life Science Sichuan Agricultural University  Ya'an China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jiu\u2010Yan","family":"Jiang","sequence":"additional","affiliation":[{"name":"College of Life Science Sichuan Agricultural University  Ya'an China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ping\u2010Wei","family":"Liang","sequence":"additional","affiliation":[{"name":"College of Life Science Sichuan Agricultural University  Ya'an China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ji","family":"Chen","sequence":"additional","affiliation":[{"name":"College of Life Science Sichuan Agricultural University  Ya'an China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lin\u2010Ping","family":"Fan","sequence":"additional","affiliation":[{"name":"College of Life Science Sichuan Agricultural University  Ya'an China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xia","family":"Zhou","sequence":"additional","affiliation":[{"name":"College of Life Science Sichuan Agricultural University  Ya'an China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ji","family":"Wang","sequence":"additional","affiliation":[{"name":"College of Life Science Sichuan Agricultural University  Ya'an China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ming\u2010Wen","family":"Duan","sequence":"additional","affiliation":[{"name":"School of Ecology and Environment Xizang University  Lhasa China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yu\u2010Qi","family":"Cheng","sequence":"additional","affiliation":[{"name":"Chengdu Zoo  Chengdu China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8900-3659","authenticated-orcid":false,"given":"Guang\u2010Xiang","family":"Zhu","sequence":"additional","affiliation":[{"name":"College of Life Science Sichuan Agricultural University  Ya'an China"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2026,9,28]]},"reference":[{"issue":"9","key":"e_1_2_15_2_1","doi-asserted-by":"crossref","first-page":"1655","DOI":"10.1101\/gr.094052.109","article-title":"Fast Model\u2010Based Estimation of Ancestry in Unrelated Individuals","volume":"19","author":"Alexander D. 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B.","year":"2015","journal-title":"Nature Cell Biology"},{"key":"e_1_2_15_6_1","doi-asserted-by":"crossref","first-page":"1733","DOI":"10.1016\/j.molp.2023.09.010","article-title":"TBtools\u2010II: A \u201cOne for All, All for One\u201d Bioinformatics Platform for Biological Big\u2010Data Mining","volume":"16","author":"Chen C.","year":"2023","journal-title":"Molecular Plant"},{"key":"e_1_2_15_7_1","doi-asserted-by":"crossref","first-page":"i884","DOI":"10.1093\/bioinformatics\/bty560","article-title":"Fastp: An Ultra\u2010Fast All\u2010In\u2010One FASTQ Preprocessor","volume":"34","author":"Chen S.","year":"2018","journal-title":"Bioinformatics"},{"key":"e_1_2_15_8_1","doi-asserted-by":"crossref","first-page":"6786","DOI":"10.7150\/thno.59703","article-title":"N\u2010Cadherin Mediates the Migration of Bone Marrow\u2010Derived Mesenchymal Stem Cells Toward Breast Tumor Cells","volume":"11","author":"Choi S.","year":"2021","journal-title":"Theranostics"},{"key":"e_1_2_15_9_1","doi-asserted-by":"crossref","first-page":"2156","DOI":"10.1093\/bioinformatics\/btr330","article-title":"The Variant Call Format and VCFtools","volume":"27","author":"Danecek P.","year":"2011","journal-title":"Bioinformatics"},{"key":"e_1_2_15_10_1","doi-asserted-by":"crossref","first-page":"491","DOI":"10.1038\/ng.806","article-title":"A Framework for Variation Discovery and Genotyping Using Next\u2010Generation DNA Sequencing Data","volume":"43","author":"DePristo M. 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