{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,28]],"date-time":"2026-09-28T04:55:17Z","timestamp":1790571317262,"version":"4.1.0"},"reference-count":60,"publisher":"Wiley","issue":"3","license":[{"start":{"date-parts":[[2026,8,20]],"date-time":"2026-08-20T00:00:00Z","timestamp":1787184000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0\/"},{"start":{"date-parts":[[2026,8,20]],"date-time":"2026-08-20T00:00:00Z","timestamp":1787184000000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/doi.wiley.com\/10.1002\/tdm_license_1.1"}],"content-domain":{"domain":["acsess.onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["The Plant Genome"],"published-print":{"date-parts":[[2026,9]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:p>\n                    Genomic selection (GS) is a powerful tool for accelerating genetic gain in potato (\n                    <jats:italic>Solanum tuberosum<\/jats:italic>\n                    L.) breeding, particularly for complex traits. In this study, three practical aspects of GS implementation in a potato breeding program were examined. First, the predictive ability of GS models was evaluated for three key traits (total yield, marketable yield, and specific gravity) using two elite potato populations with shared ancestry, tested across seven location\u2010year environments. Two cross\u2010validation strategies were used to reflect practical breeding scenarios: predicting unphenotyped lines in known environments and predicting clonal performance in unknown environments. Four models were evaluated, two of which included genotype\u2010by\u2010environment interactions. Tuber specific gravity showed higher and more consistent prediction accuracy across environments, supporting the evidence that it is a more stable trait. Second, the impact of genotyping platforms and marker density on GS performance were examined, as the two populations were genotyped using two different targeted sequencing platforms: Flex\u2010seq (22K loci) and DArTag (4K loci), sharing \u223c4K common loci, that allowed direct comparison. Prediction accuracies were comparable across platforms, indicating that both are suitable for GS implementation, with the choice depending on breeding goals, cost, and throughput considerations. Finally, the long\u2010term impact of GS on genetic gain was assessed through stochastic simulation of a 30\u2010year breeding pipeline, comparing conventional phenotypic selection with GS\u2010assisted selection scenarios. GS scenarios achieved higher long\u2010term genetic gains, though practical deployment should consider both cost and breeding objectives. Our findings for the three aspects of this study support the integration of GS into potato breeding programs, while highlighting key considerations for its effective implementation.\n                  <\/jats:p>","DOI":"10.1002\/tpg2.70293","type":"journal-article","created":{"date-parts":[[2026,8,21]],"date-time":"2026-08-21T03:35:37Z","timestamp":1787283337000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Integrating genomic selection into potato breeding: A comparison of genotyping platforms and cross\u2010environmental predictions"],"prefix":"10.1002","volume":"19","author":[{"given":"Rakshya","family":"Dhakal","sequence":"first","affiliation":[{"name":"Plant Breeding Graduate Program University of Florida  Gainesville Florida USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marco Antonio","family":"Peixoto","sequence":"additional","affiliation":[{"name":"Horticultural Sciences Department University of Florida  Gainesville Florida USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"suffix":"Jr","given":"Leo","family":"Hoffmann","sequence":"additional","affiliation":[{"name":"Horticultural Sciences Department University of Florida  Gainesville Florida USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2192-1266","authenticated-orcid":false,"given":"Bonny Michael","family":"Oloka","sequence":"additional","affiliation":[{"name":"Department of Horticultural Science North Carolina State University  Raleigh North Carolina USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mark","family":"Clough","sequence":"additional","affiliation":[{"name":"Department of Horticultural Science North Carolina State University  Raleigh North Carolina USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gabriel de Siqueira","family":"Gesteira","sequence":"additional","affiliation":[{"name":"Department of Horticultural Science North Carolina State University  Raleigh North Carolina USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lincoln","family":"Zotarelli","sequence":"additional","affiliation":[{"name":"Horticultural Sciences Department University of Florida  Gainesville Florida USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0957-4337","authenticated-orcid":false,"given":"Jeffrey B.","family":"Endelman","sequence":"additional","affiliation":[{"name":"Department of Plant &amp; Agroecosystem Sciences University of Wisconsin\u2010Madison  Madison Wisconsin USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"G. 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