{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,8]],"date-time":"2026-07-08T18:10:25Z","timestamp":1783534225832,"version":"3.55.0"},"reference-count":34,"publisher":"Wiley","issue":"4","license":[{"start":{"date-parts":[[2020,7,1]],"date-time":"2020-07-01T00:00:00Z","timestamp":1593561600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0\/"}],"funder":[{"name":"US Food and Drug Administration's Veterinary Laboratory Investigation and Response Network","award":["1U18FD006716-01"],"award-info":[{"award-number":["1U18FD006716-01"]}]},{"name":"US Food and Drug Administration's Veterinary Laboratory Investigation and Response Network","award":["1U18FD006448-01"],"award-info":[{"award-number":["1U18FD006448-01"]}]}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Veterinary Medicine &amp;amp; Sci"],"published-print":{"date-parts":[[2020,11]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Dogs are a potential source of zoonotic <jats:italic>Salmonella<\/jats:italic> transmission. We had previously estimated the prevalence of <jats:italic>Salmonella<\/jats:italic> shedding among shelter dogs throughout Texas using a repeated cross\u2010sectional study design. Our current objectives were to fully characterize the <jats:italic>Salmonella<\/jats:italic> isolates and to assess their relatedness, using whole\u2010genome sequencing. Antimicrobial resistance (AMR) genes were detected in 4\/27 (15%) of the isolates. The fosfomycin resistance gene <jats:italic>fosA7<\/jats:italic> was identified in two isolates; to our knowledge, there are no published reports of this gene in canine <jats:italic>Salmonella<\/jats:italic> isolates. The biocide resistance gene <jats:italic>qacEdelta1<\/jats:italic>, conferring resistance to quaternary ammonium compounds, was detected in an isolate that had four additional AMR genes. The most frequently identified serotypes were Newport (6\/27, 22%) and Javiana (4\/27, 15%), both of which were widespread among animal shelters. For these serotypes, there was evidence of both transmission of <jats:italic>Salmonella<\/jats:italic> within the shelter environment and separate introductions of <jats:italic>Salmonella<\/jats:italic> into a shelter. Several canine <jats:italic>Salmonella<\/jats:italic> isolates were closely related to human clinical isolates (four canine isolates within 10 SNPs and six more within 20 SNPs), suggesting a shared pathogen population. Educational outreach programmes targeting animal shelter workers would be useful for optimizing knowledge of <jats:italic>Salmonella<\/jats:italic> and other canine\u2010associated zoonotic pathogens.<\/jats:p>","DOI":"10.1002\/vms3.320","type":"journal-article","created":{"date-parts":[[2020,7,2]],"date-time":"2020-07-02T03:54:43Z","timestamp":1593662083000},"page":"975-979","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":9,"title":["Sequence analysis of <i>Salmonella enterica<\/i> isolates obtained from shelter dogs throughout Texas"],"prefix":"10.1002","volume":"6","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-3327-596X","authenticated-orcid":false,"given":"Kevin J.","family":"Cummings","sequence":"first","affiliation":[{"name":"Cornell University Ithaca NY USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6848-0846","authenticated-orcid":false,"given":"Patrick 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