{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,9]],"date-time":"2025-11-09T17:56:56Z","timestamp":1762711016361,"version":"build-2065373602"},"edition-number":"1","reference-count":8,"publisher":"Wiley","isbn-type":[{"type":"electronic","value":"9781118960608"}],"license":[{"start":{"date-parts":[[2021,2,14]],"date-time":"2021-02-14T00:00:00Z","timestamp":1613260800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/doi.wiley.com\/10.1002\/tdm_license_1.1"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:sec>\n                    <jats:label\/>\n                    <jats:p>\n                      Can.di.di.mo'nas. L. masc. adj.\n                      <jats:italic>candidus<\/jats:italic>\n                      white; L. fem. n.\n                      <jats:italic>monas<\/jats:italic>\n                      a unit, monad; N.L. fem. n.\n                      <jats:italic>Candidimonas<\/jats:italic>\n                      a unit (rod) that produces white colonies.\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:bold>Rods<\/jats:bold>\n                      , non\u2010spore\u2010forming, Gram\u2010stain\u2010negative. Nonmotile or motile by polar flagella.\n                      <jats:bold>Aerobic<\/jats:bold>\n                      or facultatively aerobic chemoorganotrophic respiratory metabolism.\n                      <jats:bold>Mesophilic<\/jats:bold>\n                      with optimal growth at around 30\u00b0C. Growth can occur in the psychrophilic range of 1\u20135\u00b0C. Reacts positively for the catalase and cytochrome\n                      <jats:italic>c<\/jats:italic>\n                      oxidase tests. Sole carbon sources include amino acids and organic acids. Glucose can be oxidized or assimilated but not fermented. Anaerobic growth can be observed in the presence of nitrate. Depending on the species, nitrate is reduced to nitrite or nitrogen. The major respiratory quinone is\n                      <jats:bold>ubiquinone 8<\/jats:bold>\n                      , and the DNA G + C content ranges 62\u201365 mol%. Fatty acid composition is variable among species, with C\n                      <jats:sub>16:0<\/jats:sub>\n                      predominating in all species, and C\n                      <jats:sub>17:0<\/jats:sub>\n                      cyclo, summed feature 3 (C\n                      <jats:sub>16:1<\/jats:sub>\n                      \u03c97\n                      <jats:italic>c<\/jats:italic>\n                      and\/or iso\u2010C\n                      <jats:sub>15:0<\/jats:sub>\n                      2\u2010OH), C\n                      <jats:sub>18:1<\/jats:sub>\n                      \u03c97\n                      <jats:italic>c<\/jats:italic>\n                      , and summed feature 2 (C\n                      <jats:sub>14:0<\/jats:sub>\n                      3\u2010OH and\/or iso\u2010C\n                      <jats:sub>16:1<\/jats:sub>\n                      I) represented among the major components in the validly named species. The polar lipids comprise phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, and some minor unidentified aminophospholipids and aminolipids. Phylogenetically, the genus\n                      <jats:italic>Candidimonas<\/jats:italic>\n                      belongs to the family\n                      <jats:italic>Alcaligenaceae<\/jats:italic>\n                      . The type species is\n                      <jats:italic>Candidimonas nitroreducens<\/jats:italic>\n                      , and the genus includes also\n                      <jats:italic>Candidimonas humi<\/jats:italic>\n                      and\n                      <jats:italic>Candidimonas bauzanensis<\/jats:italic>\n                      .\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:italic>DNA G + C content (mol%)<\/jats:italic>\n                      : 61.6\u201365.2.\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:italic>Type species<\/jats:italic>\n                      :\n                      <jats:bold>Candidimonas nitroreducens<\/jats:bold>\n                      Vaz\u2010Moreira et al. 2011\n                      <jats:sup>VP<\/jats:sup>\n                      .\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Taxonomic and Nomenclature Notes<\/jats:title>\n                    <jats:p>\n                      According to the List of Prokaryotic names with Standing in Nomenclature (LPSN), the taxonomic status of the genus\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/genus\/candidimonas\">\n                        <jats:italic>Candidimonas<\/jats:italic>\n                      <\/jats:ext-link>\n                      is: correct name (last update, February 2025)\n                      <jats:sup>*<\/jats:sup>\n                      .\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:bold>LPSN classification:<\/jats:bold>\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/domain\/bacteria\">\n                        <jats:italic>Bacteria<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/kingdom\/pseudomonadati\">\n                        <jats:italic>Pseudomonadati<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/phylum\/pseudomonadota\">\n                        <jats:italic>Pseudomonadota<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/class\/betaproteobacteria\">\n                        <jats:italic>Betaproteobacteria<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/order\/burkholderiales\">\n                        <jats:italic>Burkholderiales<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/family\/alcaligenaceae\">\n                        <jats:italic>Alcaligenaceae<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/genus\/candidimonas\">\n                        <jats:italic>Candidimonas<\/jats:italic>\n                      <\/jats:ext-link>\n                    <\/jats:p>\n                    <jats:p>\n                      The genus\n                      <jats:italic>Candidimonas<\/jats:italic>\n                      can also be recovered in the Genome Taxonomy Database (GTDB) as\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=g__Candidimonas\">\n                        <jats:italic>g__Candidimonas<\/jats:italic>\n                      <\/jats:ext-link>\n                      (version v220)\n                      <jats:sup>**<\/jats:sup>\n                      .\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:bold>GTDB classification:<\/jats:bold>\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=d__Bacteria\">\n                        <jats:italic>d__Bacteria<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=p__Pseudomonadota\">\n                        <jats:italic>p__Pseudomonadota<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=c__Gammaproteobacteria\">\n                        <jats:italic>c__Gammaproteobacteria<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=o__Burkholderiales\">\n                        <jats:italic>o__Burkholderiales<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=f__Burkholderiaceae\">\n                        <jats:italic>f__Burkholderiaceae<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=g__Candidimonas\">\n                        <jats:italic>g__Candidimonas<\/jats:italic>\n                      <\/jats:ext-link>\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:sup>*<\/jats:sup>\n                      <jats:mixed-citation publication-type=\"journal\">\n                        <jats:string-name>\n                          <jats:surname>Meier\u2010Kolthoff<\/jats:surname>\n                        <\/jats:string-name>\n                        et al. (\n                        <jats:year>2022<\/jats:year>\n                        ).\n                        <jats:source>Nucleic Acids Res<\/jats:source>\n                        ,\n                        <jats:volume>50<\/jats:volume>\n                        ,\n                        <jats:fpage>D801<\/jats:fpage>\n                        \u2013\n                        <jats:lpage>D807<\/jats:lpage>\n                        ; DOI:\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"doi\" xlink:href=\"10.1093\/nar\/gkab902\">10.1093\/nar\/gkab902<\/jats:ext-link>\n                      <\/jats:mixed-citation>\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:sup>**<\/jats:sup>\n                      <jats:mixed-citation publication-type=\"journal\">\n                        <jats:string-name>\n                          <jats:surname>Parks<\/jats:surname>\n                        <\/jats:string-name>\n                        et al. (\n                        <jats:year>2022<\/jats:year>\n                        ).\n                        <jats:source>Nucleic Acids Res<\/jats:source>\n                        ,\n                        <jats:volume>50<\/jats:volume>\n                        ,\n                        <jats:fpage>D785<\/jats:fpage>\n                        \u2013\n                        <jats:lpage>D794<\/jats:lpage>\n                        ; DOI:\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"doi\" xlink:href=\"10.1093\/nar\/gkab776\">10.1093\/nar\/gkab776<\/jats:ext-link>\n                      <\/jats:mixed-citation>\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.1002\/9781118960608.gbm01821","type":"other","created":{"date-parts":[[2021,2,14]],"date-time":"2021-02-14T15:25:01Z","timestamp":1613316301000},"page":"1-6","source":"Crossref","is-referenced-by-count":1,"title":["<i>Candidimonas<\/i>"],"prefix":"10.1002","author":[{"given":"C\u00e9lia M.","family":"Manaia","sequence":"first","affiliation":[]},{"given":"Ivone","family":"Vaz\u2010Moreira","sequence":"additional","affiliation":[]},{"given":"Olga C.","family":"Nunes","sequence":"additional","affiliation":[]}],"member":"311","published-online":{"date-parts":[[2021,2,14]]},"reference":[{"key":"e_1_2_8_2_1","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2017.113"},{"key":"e_1_2_8_3_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv681"},{"key":"e_1_2_8_4_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00248-007-9314-2"},{"key":"e_1_2_8_5_1","doi-asserted-by":"publisher","DOI":"10.1099\/ijs.0.021188-0"},{"key":"e_1_2_8_6_1","doi-asserted-by":"publisher","DOI":"10.1099\/00207713-37-4-463"},{"key":"e_1_2_8_7_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-30197-1_238"},{"key":"e_1_2_8_8_1","doi-asserted-by":"publisher","DOI":"10.1099\/ijs.0.018903-0"},{"key":"e_1_2_8_9_1","doi-asserted-by":"publisher","DOI":"10.1099\/ijs.0.036400-0"}],"container-title":["Bergey's Manual of Systematics of Archaea and Bacteria"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1002\/9781118960608.gbm01821","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/full-xml\/10.1002\/9781118960608.gbm01821","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1002\/9781118960608.gbm01821","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,11,9]],"date-time":"2025-11-09T16:27:37Z","timestamp":1762705657000},"score":1,"resource":{"primary":{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/9781118960608.gbm01821"}},"subtitle":[],"editor":[{"given":"Peter","family":"Vandamme","sequence":"additional","affiliation":[]}],"short-title":[],"issued":{"date-parts":[[2021,2,14]]},"ISBN":["9781118960608"],"references-count":8,"alternative-id":["10.1002\/9781118960608.gbm01821","10.1002\/9781118960608"],"URL":"https:\/\/doi.org\/10.1002\/9781118960608.gbm01821","archive":["Portico"],"relation":{},"subject":[],"published":{"date-parts":[[2021,2,14]]}}}