{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,9]],"date-time":"2025-11-09T16:29:35Z","timestamp":1762705775219,"version":"build-2065373602"},"edition-number":"1","reference-count":12,"publisher":"Wiley","isbn-type":[{"type":"electronic","value":"9781118960608"}],"license":[{"start":{"date-parts":[[2019,12,16]],"date-time":"2019-12-16T00:00:00Z","timestamp":1576454400000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/doi.wiley.com\/10.1002\/tdm_license_1.1"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:sec>\n                    <jats:label\/>\n                    <jats:p>\n                      O.ry.zi.so.li.bac'ter. L. fem. n.\n                      <jats:italic>oryza<\/jats:italic>\n                      rice; L. neut. n.\n                      <jats:italic>solum<\/jats:italic>\n                      soil; N.L. masc. n.\n                      <jats:italic>bacter<\/jats:italic>\n                      rod; N.L. masc. n.\n                      <jats:italic>Oryzisolibacter<\/jats:italic>\n                      rod from rice crop bulk soil.\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:bold>Rods<\/jats:bold>\n                      1.9 \u00b1 0.35\u2010\u03bcm long and 0.6 \u00b1 0.04\u2010\u03bcm wide.\n                      <jats:bold>Motile<\/jats:bold>\n                      .\n                      <jats:bold>Gram\u2010negative<\/jats:bold>\n                      . Nonsporulating.\n                      <jats:bold>Facultative aerobe<\/jats:bold>\n                      . Nitrate is reduced to N\n                      <jats:sub>2<\/jats:sub>\n                      . Mesophilic, with the ability to grow between 15 and 37\u00b0C, pH 6\u20139, and at a NaCl concentration up to 4%.\n                      <jats:bold>Chemoorganotroph<\/jats:bold>\n                      , being able to assimilate glycerol, potassium gluconate, adipic acid, malic acid, and (trisodium) citrate. Catalase\u2010 and cytochrome\n                      <jats:italic>c<\/jats:italic>\n                      oxidase\u2010positive. The respiratory quinone is\n                      <jats:bold>ubiquinone 8<\/jats:bold>\n                      , and the major fatty acids are C\n                      <jats:sub>18:1<\/jats:sub>\n                      \u03c97\n                      <jats:italic>c<\/jats:italic>\n                      , C\n                      <jats:sub>16:0<\/jats:sub>\n                      , and the summed feature 3 (C\n                      <jats:sub>16:1<\/jats:sub>\n                      \u03c97\n                      <jats:italic>c<\/jats:italic>\n                      \/iso\u2010C\n                      <jats:sub>15:0<\/jats:sub>\n                      2\u2010OH). The major polar lipids are phosphatidylethanolamine, phosphatidylglycerol, and diphosphatidylglycerol. Isolated from rice paddy soil through an enrichment culture in the presence of propanil and 3,4\u2010dichloroaniline; the type strain of the type species\n                      <jats:italic>Oryzisolibacter propanilivorax<\/jats:italic>\n                      is able to degrade both compounds.\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:italic>DNA G+C content (mol%)<\/jats:italic>\n                      : 69.4 (HPLC) or 69.2 (genome analysis).\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:italic>Type species<\/jats:italic>\n                      :\n                      <jats:bold>Oryzisolibacter propanilivorax<\/jats:bold>\n                      Vaz\u2010Moreira et al. 2017\n                      <jats:sup>VP<\/jats:sup>\n                      .\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Taxonomic and Nomenclature Notes<\/jats:title>\n                    <jats:p>\n                      According to the List of Prokaryotic names with Standing in Nomenclature (LPSN), the taxonomic status of the genus\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/genus\/oryzisolibacter\">\n                        <jats:italic>Oryzisolibacter<\/jats:italic>\n                      <\/jats:ext-link>\n                      is: correct name (last update, February 2025)\n                      <jats:sup>*<\/jats:sup>\n                      .\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:bold>LPSN classification:<\/jats:bold>\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/domain\/bacteria\">\n                        <jats:italic>Bacteria<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/kingdom\/pseudomonadati\">\n                        <jats:italic>Pseudomonadati<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/phylum\/pseudomonadota\">\n                        <jats:italic>Pseudomonadota<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/class\/betaproteobacteria\">\n                        <jats:italic>Betaproteobacteria<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/order\/burkholderiales\">\n                        <jats:italic>Burkholderiales<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/family\/comamonadaceae\">\n                        <jats:italic>Comamonadaceae<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/lpsn.dsmz.de\/genus\/oryzisolibacter\">\n                        <jats:italic>Oryzisolibacter<\/jats:italic>\n                      <\/jats:ext-link>\n                    <\/jats:p>\n                    <jats:p>\n                      The genus\n                      <jats:italic>Oryzisolibacter<\/jats:italic>\n                      can also be recovered in the Genome Taxonomy Database (GTDB) as\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=g__Oryzisolibacter\">\n                        <jats:italic>g__Oryzisolibacter<\/jats:italic>\n                      <\/jats:ext-link>\n                      (version v220)\n                      <jats:sup>**<\/jats:sup>\n                      .\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:bold>GTDB classification:<\/jats:bold>\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=d__Bacteria\">\n                        <jats:italic>d__Bacteria<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=p__Pseudomonadota\">\n                        <jats:italic>p__Pseudomonadota<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=c__Gammaproteobacteria\">\n                        <jats:italic>c__Gammaproteobacteria<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=o__Burkholderiales\">\n                        <jats:italic>o__Burkholderiales<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=f__Burkholderiaceae\">\n                        <jats:italic>f__Burkholderiaceae<\/jats:italic>\n                      <\/jats:ext-link>\n                      \/\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"https:\/\/gtdb.ecogenomic.org\/tree?r=g__Oryzisolibacter\">\n                        <jats:italic>g__Oryzisolibacter<\/jats:italic>\n                      <\/jats:ext-link>\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:sup>*<\/jats:sup>\n                      <jats:mixed-citation publication-type=\"journal\">\n                        <jats:string-name>\n                          <jats:surname>Meier\u2010Kolthoff<\/jats:surname>\n                        <\/jats:string-name>\n                        et al. (\n                        <jats:year>2022<\/jats:year>\n                        ).\n                        <jats:source>Nucleic Acids Res<\/jats:source>\n                        ,\n                        <jats:volume>50<\/jats:volume>\n                        ,\n                        <jats:fpage>D801<\/jats:fpage>\n                        \u2013\n                        <jats:lpage>D807<\/jats:lpage>\n                        ; DOI:\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"doi\" xlink:href=\"10.1093\/nar\/gkab902\">10.1093\/nar\/gkab902<\/jats:ext-link>\n                      <\/jats:mixed-citation>\n                    <\/jats:p>\n                    <jats:p>\n                      <jats:sup>**<\/jats:sup>\n                      <jats:mixed-citation publication-type=\"journal\">\n                        <jats:string-name>\n                          <jats:surname>Parks<\/jats:surname>\n                        <\/jats:string-name>\n                        et al. (\n                        <jats:year>2022<\/jats:year>\n                        ).\n                        <jats:source>Nucleic Acids Res<\/jats:source>\n                        ,\n                        <jats:volume>50<\/jats:volume>\n                        ,\n                        <jats:fpage>D785<\/jats:fpage>\n                        \u2013\n                        <jats:lpage>D794<\/jats:lpage>\n                        ; DOI:\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"doi\" xlink:href=\"10.1093\/nar\/gkab776\">10.1093\/nar\/gkab776<\/jats:ext-link>\n                      <\/jats:mixed-citation>\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.1002\/9781118960608.gbm01828","type":"other","created":{"date-parts":[[2019,12,16]],"date-time":"2019-12-16T06:35:34Z","timestamp":1576478134000},"page":"1-5","source":"Crossref","is-referenced-by-count":0,"title":["<i>\n                      <scp>O<\/scp>\n                      ryzisolibacter\n                    <\/i>"],"prefix":"10.1002","author":[{"given":"Olga C.","family":"Nunes","sequence":"first","affiliation":[]},{"given":"C\u00e9lia M.","family":"Manaia","sequence":"additional","affiliation":[]},{"given":"Ivone","family":"Vaz\u2010Moreira","sequence":"additional","affiliation":[]}],"member":"311","published-online":{"date-parts":[[2019,12,16]]},"reference":[{"key":"e_1_2_9_2_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2164-9-75"},{"key":"e_1_2_9_3_1","doi-asserted-by":"publisher","DOI":"10.1038\/srep08365"},{"key":"e_1_2_9_4_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.watres.2010.08.006"},{"key":"e_1_2_9_5_1","doi-asserted-by":"publisher","DOI":"10.1099\/ijs.0.64483-0"},{"key":"e_1_2_9_6_1","doi-asserted-by":"publisher","DOI":"10.1099\/ijsem.0.002294"},{"key":"e_1_2_9_7_1","doi-asserted-by":"publisher","DOI":"10.1099\/ijs.0.02276-0"},{"key":"e_1_2_9_8_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt1226"},{"key":"e_1_2_9_9_1","doi-asserted-by":"publisher","DOI":"10.1128\/JB.01688-14"},{"key":"e_1_2_9_10_1","first-page":"111","article-title":"Bypassing cultivation to identify bacterial species","volume":"9","author":"Rodriguez\u2010R LM","year":"2014","journal-title":"Microbe"},{"key":"e_1_2_9_11_1","doi-asserted-by":"publisher","DOI":"10.1099\/ijsem.0.002184"},{"key":"e_1_2_9_12_1","doi-asserted-by":"publisher","DOI":"10.1099\/ijs.0.055103-0"},{"key":"e_1_2_9_13_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-30197-1_238"}],"container-title":["Bergey's Manual of Systematics of Archaea and Bacteria"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1002%2F9781118960608.gbm01828","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1002\/9781118960608.gbm01828","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/full-xml\/10.1002\/9781118960608.gbm01828","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1002\/9781118960608.gbm01828","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,11,9]],"date-time":"2025-11-09T16:27:39Z","timestamp":1762705659000},"score":1,"resource":{"primary":{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/9781118960608.gbm01828"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,12,16]]},"ISBN":["9781118960608"],"references-count":12,"alternative-id":["10.1002\/9781118960608.gbm01828","10.1002\/9781118960608"],"URL":"https:\/\/doi.org\/10.1002\/9781118960608.gbm01828","archive":["Portico"],"relation":{},"subject":[],"published":{"date-parts":[[2019,12,16]]}}}