{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,2,26]],"date-time":"2025-02-26T05:34:46Z","timestamp":1740548086903,"version":"3.38.0"},"publisher-location":"Berlin, Heidelberg","reference-count":16,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540269724"},{"type":"electronic","value":"9783540316930"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2005]]},"DOI":"10.1007\/11508069_51","type":"book-chapter","created":{"date-parts":[[2010,9,26]],"date-time":"2010-09-26T18:30:58Z","timestamp":1285525858000},"page":"390-397","source":"Crossref","is-referenced-by-count":0,"title":["Matching Peptide Sequences with Mass Spectra"],"prefix":"10.1007","author":[{"given":"K. W.","family":"Lau","sequence":"first","affiliation":[]},{"given":"B.","family":"Stapley","sequence":"additional","affiliation":[]},{"given":"S.","family":"Hubbard","sequence":"additional","affiliation":[]},{"given":"H.","family":"Yin","sequence":"additional","affiliation":[]}],"member":"297","reference":[{"key":"51_CR1","doi-asserted-by":"publisher","first-page":"3551","DOI":"10.1002\/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2","volume":"20","author":"D.N. Perkins","year":"1999","unstructured":"Perkins, D.N., Pappin, D.J.C., Creasy, D.M., Cottrell, J.S.: Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis\u00a020, 3551\u20133567 (1999)","journal-title":"Electrophoresis"},{"key":"51_CR2","doi-asserted-by":"publisher","first-page":"1426","DOI":"10.1002\/1615-9861(200210)2:10<1426::AID-PROT1426>3.0.CO;2-5","volume":"2","author":"D.M. Creasy","year":"2002","unstructured":"Creasy, D.M., Cottrell, J.S.: Error tolerant searching of uninterpreted tandem mass spectrometry data. Proteomics\u00a02, 1426\u20131434 (2002)","journal-title":"Proteomics"},{"key":"51_CR3","doi-asserted-by":"publisher","first-page":"976","DOI":"10.1016\/1044-0305(94)80016-2","volume":"5","author":"J.K. Eng","year":"1994","unstructured":"Eng, J.K., McCormack, A.L., Yates, J.R.: III: An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J. Am. Soc. Mass Spectrom.\u00a05, 976\u2013989 (1994)","journal-title":"J. Am. Soc. Mass Spectrom."},{"key":"51_CR4","doi-asserted-by":"publisher","first-page":"1089","DOI":"10.1016\/S1044-0305(96)00079-7","volume":"7","author":"J.R. Yates III","year":"1996","unstructured":"Yates III, J.R., Eng, J.K., Clauser, K.R., Burlingame, A.L.: Search of Sequence Databases with Uninterpreted High-Energy Collision-Induced Dissociation Spectra of Peptides. J. Am. Soc. Mass Spectrom.\u00a07, 1089\u20131098 (1996)","journal-title":"J. Am. Soc. Mass Spectrom."},{"key":"51_CR5","doi-asserted-by":"publisher","first-page":"327","DOI":"10.1089\/106652799318300","volume":"6","author":"V. Dancik","year":"1999","unstructured":"Dancik, V., Addona, T.A., Clauser, K.R., Vath, J.E., Pevzner, P.A.: De novo peptide sequencing via tandem mass spectrometry. J. Comp. Biol.\u00a06, 327\u2013342 (1999)","journal-title":"J. Comp. Biol."},{"key":"51_CR6","doi-asserted-by":"publisher","first-page":"325","DOI":"10.1089\/10665270152530872","volume":"8","author":"T. Chen","year":"2001","unstructured":"Chen, T., Kao, M.Y., Tepel, M., Rush, J., Church, G.M.: A dynamic programming approach to de novo peptide sequencing via tandem mass spectrometry. J. Comp. Biol.\u00a08, 325\u2013337 (2001)","journal-title":"J. Comp. Biol."},{"key":"51_CR7","doi-asserted-by":"crossref","unstructured":"Bafna, V., Edwards, N.: On de novo interpretation of tandem mass spectra for peptide identification. In: Annual Conference on Research in Computational Molecular Biology, Proceedings of the seventh annual international conference on Computational molecular biology, pp. 9\u201318 (2003)","DOI":"10.1145\/640075.640077"},{"key":"51_CR8","doi-asserted-by":"publisher","first-page":"2621","DOI":"10.1021\/ac00148a019","volume":"59","author":"R.S. Johnson","year":"1987","unstructured":"Johnson, R.S., Martin, S.A., Biemann, K., Stults, J.T., Throck, W.J.: Novel fragmentation process of peptides by collision-induced decomposition in a tandem mass spectrometer: differentiation of leucine and isoleucine. Anal. Chem.\u00a059, 2621\u20132625 (1987)","journal-title":"Anal. Chem."},{"key":"51_CR9","doi-asserted-by":"publisher","first-page":"99","DOI":"10.1002\/bms.1200160119","volume":"16","author":"K. Biemann","year":"1988","unstructured":"Biemann, K.: Contributions of mass spectrometry of peptide and protein structure. Biomed. Env. Mass Spectrom.\u00a016, 99\u2013111 (1988)","journal-title":"Biomed. Env. Mass Spectrom."},{"key":"51_CR10","doi-asserted-by":"publisher","first-page":"337","DOI":"10.1016\/1044-0305(92)87061-3","volume":"3","author":"O. Burlet","year":"1992","unstructured":"Burlet, O., Yang, C.Y., Gaskell, S.J.: Influence of cysteine to cysteic acid oxidation on the collision-activated decomposition of protonated peptides: evidence for intraionic interactions. J. Am. Soc. Mass Spectrom.\u00a03, 337\u2013344 (1992)","journal-title":"J. Am. Soc. Mass Spectrom."},{"key":"51_CR11","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1016\/S1044-0305(96)00155-9","volume":"8","author":"S.G. Summerfield","year":"1997","unstructured":"Summerfield, S.G., Cox, K.A., Gaskell, S.J.: The Promotion of d-type Ions During the Low Energy Collision-Induced Dissociation of Some Cysteic Acid-Containing Peptides. J. Am. Soc. Mass Spectrom.\u00a08, 25\u201331 (1997)","journal-title":"J. Am. Soc. Mass Spectrom."},{"key":"51_CR12","doi-asserted-by":"publisher","first-page":"6251","DOI":"10.1021\/ac034616t","volume":"75","author":"E.A. Kapp","year":"2003","unstructured":"Kapp, E.A., Sch\u00fctz, F., Reid, G.E., Simpson, R.J.: Mining a tandem mass spectrometry database to determine the trends and global factors influencing peptide fragmentation. Anal. Chem.\u00a075, 6251\u20136264 (2003)","journal-title":"Anal. Chem."},{"key":"51_CR13","doi-asserted-by":"publisher","first-page":"363","DOI":"10.1002\/bms.1200190607","volume":"19","author":"C. Bartels","year":"1990","unstructured":"Bartels, C.: Fast algorithm for peptide sequencing by mass spectroscopy. Biomed. Env. Mass Spectrom.\u00a019, 363\u2013368 (1990)","journal-title":"Biomed. Env. Mass Spectrom."},{"key":"51_CR14","doi-asserted-by":"crossref","unstructured":"Leslie, C., Eskin, E., Noble, W.S.: The spectrum kernel: a string kernel for SVM protein classification. In: Proceedings of the Pacific Symposium on Biocomputing, pp. 564\u20135752 (2002)","DOI":"10.1142\/9789812799623_0053"},{"key":"51_CR15","doi-asserted-by":"crossref","unstructured":"Lee, L.: Measures of Distributional Similarity. In: 37th Annual Meeting of the ACL, pp. 25\u201332 (1999)","DOI":"10.3115\/1034678.1034693"},{"key":"51_CR16","doi-asserted-by":"publisher","first-page":"471","DOI":"10.1038\/nbt0404-471","volume":"22","author":"J.T. Prince","year":"2004","unstructured":"Prince, J.T., Carlson, M.W., Wang, R., Lu, P., Marcotte, E.M.: The need for a public proteomics repository. Nature Biotech.\u00a022, 471\u2013472 (2004)","journal-title":"Nature Biotech."}],"container-title":["Lecture Notes in Computer Science","Intelligent Data Engineering and Automated Learning - IDEAL 2005"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/11508069_51.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,2,26]],"date-time":"2025-02-26T02:25:13Z","timestamp":1740536713000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/11508069_51"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2005]]},"ISBN":["9783540269724","9783540316930"],"references-count":16,"URL":"https:\/\/doi.org\/10.1007\/11508069_51","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2005]]}}}