{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,1,4]],"date-time":"2025-01-04T16:10:11Z","timestamp":1736007011453,"version":"3.32.0"},"publisher-location":"Berlin, Heidelberg","reference-count":25,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540291725"},{"type":"electronic","value":"9783540317241"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2005]]},"DOI":"10.1007\/11562214_6","type":"book-chapter","created":{"date-parts":[[2005,9,27]],"date-time":"2005-09-27T13:11:28Z","timestamp":1127826688000},"page":"58-69","source":"Crossref","is-referenced-by-count":27,"title":["Parsing Biomedical Literature"],"prefix":"10.1007","author":[{"given":"Matthew","family":"Lease","sequence":"first","affiliation":[]},{"given":"Eugene","family":"Charniak","sequence":"additional","affiliation":[]}],"member":"297","reference":[{"doi-asserted-by":"crossref","unstructured":"Kim, J.d., Ohta, T., Tateisi, Y., Tsujii, J.: Genia corpus - a semantically annotated corpus for bio-textmining. Bioinformatics (Supplement: Eleventh International Conference on Intelligent Systems for Molecular Biology)\u00a019, i180\u2013i182 (2003)","key":"6_CR1","DOI":"10.1093\/bioinformatics\/btg1023"},{"unstructured":"Tateisi, Y., Ohta, T., dong Kim, J., Hong, H., Jian, S., Tsujii, J.: The genia corpus: Medline abstracts annotated with linguistic information. In: Third meeting of SIG on Text Mining, Intelligent Systems for Molecular Biology, ISMB (2003)","key":"6_CR2"},{"unstructured":"Charniak, E.: A maximum-entropy-inspired parser. In: Proc. NAACL, pp. 132\u2013139 (2000)","key":"6_CR3"},{"key":"6_CR4","first-page":"313","volume":"19","author":"M. Marcus","year":"1993","unstructured":"Marcus, M., Santorini, B., Marcinkiewicz, M.A.: Building a large annotated corpus of English: The Penn Treebank. Computational Linguistics\u00a019, 313\u2013330 (1993)","journal-title":"Computational Linguistics"},{"unstructured":"Collins, M.: Discriminative reranking for natural language parsing. In: Proc. ICML, pp. 175\u2013182 (2000)","key":"6_CR5"},{"key":"6_CR6","doi-asserted-by":"publisher","first-page":"151","DOI":"10.1023\/A:1007502103375","volume":"34","author":"A. Ratnaparkhi","year":"1999","unstructured":"Ratnaparkhi, A.: Learning to parse natural language with maximum entropy models. Machine Learning\u00a034, 151\u2013175 (1999)","journal-title":"Machine Learning"},{"unstructured":"Gildea, D.: Corpus variation and parser performance. In: Proceedings of the 2001 Conference on Empirical Methods in Natural Language Processing, pp. 167\u2013202 (2001)","key":"6_CR7"},{"doi-asserted-by":"crossref","unstructured":"Roark, B., Bacchiani, M.: Supervised and unsupervised pcfg adaptation to novel domains. In: Proceedings of HLT-NAACL, pp. 205\u2013212 (2003)","key":"6_CR8","DOI":"10.3115\/1073445.1073472"},{"doi-asserted-by":"crossref","unstructured":"Steedman, M., Hwa, R., Clark, S., Osborne, M., Sarkar, A., Hockenmaier, J., Ruhlen, P., Baker, S., Crim, J.: Example selection for bootstrapping statistical parsers. In: Proceedings of HLT-NAACL, pp. 331\u2013338 (2003)","key":"6_CR9","DOI":"10.3115\/1073445.1073476"},{"unstructured":"de Bruijn, B., Martin, J.: Literature mining in molecular biology. In: Proceedings of the European Federation for Medical Informatics (EFMI) Workshop on Natural Language Processing in Biomedical Applications (2002)","key":"6_CR10"},{"key":"6_CR11","doi-asserted-by":"publisher","first-page":"1553","DOI":"10.1093\/bioinformatics\/18.12.1553","volume":"18","author":"L. Hirschman","year":"2002","unstructured":"Hirschman, L., Park, J., Tsujii, J., Wong, L., Wu, C.: Accomplishments and challenges in literature data mining for biology. Bioinformatics\u00a018, 1553\u20131561 (2002)","journal-title":"Bioinformatics"},{"doi-asserted-by":"crossref","unstructured":"Yakushiji, A., Tateisi, Y., Miyao, Y., Tsujii, J.: Event extraction from biomedical papers using a full parser. In: Pacific Symposium on Biocomputing, pp. 408\u2013419 (2001)","key":"6_CR12","DOI":"10.1142\/9789814447362_0040"},{"key":"6_CR13","doi-asserted-by":"publisher","first-page":"604","DOI":"10.1093\/bioinformatics\/btg452","volume":"20","author":"N. Daraselia","year":"2004","unstructured":"Daraselia, N., Yuryev, A., Egorov, S., Novichkova, S., Nikitin, A., Mazo, I.: Extracting human protein interactions from medline using a full-sentence parser. Bioinformatics\u00a020, 604\u2013611 (2004)","journal-title":"Bioinformatics"},{"key":"6_CR14","doi-asserted-by":"publisher","first-page":"821","DOI":"10.1089\/106652703322756104","volume":"10","author":"H. Shatkay","year":"2003","unstructured":"Shatkay, H., Feldman, R.: Mining the biomedical literature in the genomic era: An overview. Journal of Computational Biology\u00a010, 821\u2013855 (2003)","journal-title":"Journal of Computational Biology"},{"unstructured":"Hwa, R.: Learning Probabilistic Lexicalized Grammars for Natural Language Processing. PhD thesis, Harvard University (2001)","key":"6_CR15"},{"unstructured":"Bies, A., Ferguson, M., Katz, K., MacIntyre, R.: Bracketting Guideliness for Treebank\u00a0II style Penn Treebank Project. Linguistic Data Consortium (1995)","key":"6_CR16"},{"unstructured":"Buckley, C.: Implementation of the smart information retrieval system. Technical Report 85-686, Cornell University (1985)","key":"6_CR17"},{"unstructured":"Goodman, J.: Parsing inside-out. PhD thesis, Harvard University (1998)","key":"6_CR18"},{"unstructured":"McCray, A.T., Srinivasan, S., Browne, A.C.: Lexical methods for managing variation in biomedical terminologies. In: Proceedings of the 18th Annual Symposium on Computer Applications in Medical Care (SCAMC), pp. 235\u2013239 (1994)","key":"6_CR19"},{"unstructured":"Grover, C., Lapata, M., Lascarides, A.: A comparison of parsing technologies for the biomedical domain. Journal of Natural Language Engineering (2002)","key":"6_CR20"},{"doi-asserted-by":"crossref","unstructured":"Surdeanu, M., Harabagiu, S., Williams, J., Aarseth, P.: Using predicate-argument structures for information extraction. In: Proceedings of the 41st Annual Meeting of the Association for Computational Linguistics (ACL-2003), pp. 8\u201315 (2003)","key":"6_CR21","DOI":"10.3115\/1075096.1075098"},{"doi-asserted-by":"crossref","unstructured":"Miyao, Y., Ninomiya, T., Tsujii, J.: Corpus-oriented grammar development for acquiring a head-driven phrase structure grammar from the penn treebank. In: Proc. of IJCNLP-2004, pp. 684\u2013693 (2004)","key":"6_CR22","DOI":"10.1007\/978-3-540-30211-7_72"},{"unstructured":"Zhou, G., Su, J.: Exploring deep knowledge resources in biomedical name recognition. In: Proceedings of the Joint Workshop on Natural Language Processing in Biomedicine and its Applications, JNLPBA-2004 (2004)","key":"6_CR23"},{"unstructured":"Charniak, E.: Statistical parsing with a context-free grammar and word statistics. In: Proceedings of the Fourteenth National Conference on Artificial Intelligence. AAAI Press\/MIT Press, Menlo Park (1997)","key":"6_CR24"},{"key":"6_CR25","doi-asserted-by":"publisher","first-page":"62","DOI":"10.1109\/5254.972092","volume":"16","author":"J.C. Park","year":"2001","unstructured":"Park, J.C.: Using combinatory categorical grammar to extract biomedical information. IEEE Intelligent Systems\u00a016, 62\u201367 (2001)","journal-title":"IEEE Intelligent Systems"}],"container-title":["Lecture Notes in Computer Science","Natural Language Processing \u2013 IJCNLP 2005"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/11562214_6.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,1,4]],"date-time":"2025-01-04T15:36:14Z","timestamp":1736004974000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/11562214_6"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2005]]},"ISBN":["9783540291725","9783540317241"],"references-count":25,"URL":"https:\/\/doi.org\/10.1007\/11562214_6","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2005]]}}}