{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,4]],"date-time":"2024-09-04T17:52:28Z","timestamp":1725472348806},"publisher-location":"Berlin, Heidelberg","reference-count":12,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540472421"},{"type":"electronic","value":"9783540472438"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2006]]},"DOI":"10.1007\/11902140_17","type":"book-chapter","created":{"date-parts":[[2006,10,26]],"date-time":"2006-10-26T13:35:29Z","timestamp":1161869729000},"page":"144-153","source":"Crossref","is-referenced-by-count":2,"title":["Extracting Gene Regulation Information from Microarray Time-Series Data Using Hidden Markov Models"],"prefix":"10.1007","author":[{"given":"Osman N.","family":"Yo\u011furt\u00e7u","sequence":"first","affiliation":[]},{"given":"Engin","family":"Erzin","sequence":"additional","affiliation":[]},{"given":"Attila","family":"G\u00fcrsoy","sequence":"additional","affiliation":[]}],"member":"297","reference":[{"key":"17_CR1","doi-asserted-by":"publisher","first-page":"14863","DOI":"10.1073\/pnas.95.25.14863","volume":"95","author":"M. Eisen","year":"1998","unstructured":"Eisen, M., Spellman, P., Brown, P., Bolstein, D.: Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. USA\u00a095, 14863\u201314868 (1998)","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"17_CR2","doi-asserted-by":"publisher","first-page":"317","DOI":"10.1089\/10665270252935485","volume":"9","author":"V. Filkov","year":"2002","unstructured":"Filkov, V., Skiena, S., Zhi, J.: Analysis techniques for microarray time-series data. J. Comput. Biol.\u00a09, 317\u2013330 (2002)","journal-title":"J. Comput. Biol."},{"key":"17_CR3","doi-asserted-by":"publisher","first-page":"905","DOI":"10.1093\/bioinformatics\/btg106","volume":"19","author":"A. Kwon","year":"2003","unstructured":"Kwon, A., Hoos, H., Ng, R.: Inference of transcriptional regulation relationships from gene expression data. Bioinformatics\u00a019, 905\u2013912 (2003)","journal-title":"Bioinformatics"},{"key":"17_CR4","doi-asserted-by":"publisher","first-page":"601","DOI":"10.1089\/106652700750050961","volume":"7","author":"N. Friedman","year":"2000","unstructured":"Friedman, N., Linial, M., Nachman, I., Pr, D.: Using bayesian networks to analyze expression data. J. Comput. Biol.\u00a07, 601\u2013620 (2000)","journal-title":"J. Comput. Biol."},{"key":"17_CR5","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"267","DOI":"10.1007\/3-540-36182-0_24","volume-title":"Discovery Science","author":"M. Hoon De","year":"2002","unstructured":"De Hoon, M., Imoto, S., Miyano, S.: Inferring gene regulatory networks from time-ordered gene expression data using differential equations. In: Lange, S., Satoh, K., Smith, C.H. (eds.) DS 2002. LNCS, vol.\u00a02534, pp. 267\u2013274. Springer, Heidelberg (2002)"},{"issue":"5","key":"17_CR6","doi-asserted-by":"publisher","first-page":"742","DOI":"10.1093\/bioinformatics\/btg479","volume":"20","author":"L.K.e. Yeung","year":"2004","unstructured":"Yeung, L.K.e.: Measuring correlation between microarray time-series data using dominant spectral component. Bioinformatics\u00a020(5), 742\u2013749 (2004)","journal-title":"Bioinformatics"},{"key":"17_CR7","doi-asserted-by":"crossref","first-page":"79","DOI":"10.1007\/BF02458837","volume":"51","author":"G. Churchill","year":"1989","unstructured":"Churchill, G.: Stochastic models for heterogeneous DNA sequences. B. Math. Biol.\u00a051, 79\u201394 (1989)","journal-title":"B. Math. Biol."},{"key":"17_CR8","doi-asserted-by":"publisher","first-page":"159","DOI":"10.1016\/0022-2836(92)90723-W","volume":"223","author":"L. Cardon","year":"1992","unstructured":"Cardon, L., Stormo, G.: Expectation maximization algorithm for identifying protein-binding sites with variable lengths from unaligned dna fragments. Journal of Molecular Biology\u00a0223, 159\u2013170 (1992)","journal-title":"Journal of Molecular Biology"},{"key":"17_CR9","doi-asserted-by":"publisher","first-page":"1501","DOI":"10.1006\/jmbi.1994.1104","volume":"235","author":"A. Krogh","year":"1994","unstructured":"Krogh, A., Brown, M., Mian, S., Sjolander, K., Haussler, D.: Hidden markov models in computational biology: Applications to protein modeling. Journal of Molecular Biology\u00a0235, 1501\u20131531 (1994)","journal-title":"Journal of Molecular Biology"},{"key":"17_CR10","doi-asserted-by":"crossref","first-page":"3273","DOI":"10.1091\/mbc.9.12.3273","volume":"9","author":"P. Spellman","year":"1998","unstructured":"Spellman, P., Sherlock, G., Zhang, M., Iyer, V., Anders, K., Eisen, M., Brown, P., Botstein, D., Futcher, B.: Comprehensive identification of cell cycle-regulated genes of the yeast saccharomyces cerevisiae by microarray hybridization. Mol. Biol. Cell\u00a09, 3273\u20133297 (1998)","journal-title":"Mol. Biol. Cell"},{"key":"17_CR11","first-page":"1","volume":"3","author":"L. Baum","year":"1972","unstructured":"Baum, L.: An inequality and associated maximization technique in statistical estimation of probabilistic functions of a Markov process. Inequalities\u00a03, 1\u20138 (1972)","journal-title":"Inequalities"},{"key":"17_CR12","volume-title":"The HTK Book (for HTK version 3.2.1)","author":"S. Young","year":"2002","unstructured":"Young, S., Evermann, G., Hain, T., Kershaw, D., Moore, G., Odell, J., Ollason, D., Povey, D., Valtchev, V., Woodland, P.: The HTK Book (for HTK version 3.2.1). Cambridge University Engineering Department, Cambridge (2002)"}],"container-title":["Lecture Notes in Computer Science","Computer and Information Sciences \u2013 ISCIS 2006"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/11902140_17.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,4,27]],"date-time":"2021-04-27T07:37:18Z","timestamp":1619509038000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/11902140_17"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2006]]},"ISBN":["9783540472421","9783540472438"],"references-count":12,"URL":"https:\/\/doi.org\/10.1007\/11902140_17","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2006]]}}}