{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,4]],"date-time":"2024-09-04T21:11:45Z","timestamp":1725484305129},"publisher-location":"Berlin, Heidelberg","reference-count":19,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540438625"},{"type":"electronic","value":"9783540454526"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2002]]},"DOI":"10.1007\/3-540-45452-7_1","type":"book-chapter","created":{"date-parts":[[2007,5,16]],"date-time":"2007-05-16T01:55:29Z","timestamp":1179280529000},"page":"1-16","source":"Crossref","is-referenced-by-count":0,"title":["Practical Software for Aligning ESTs to Human Genome"],"prefix":"10.1007","author":[{"given":"Jun","family":"Ogasawara","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shinichi","family":"Morishita","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2002,6,21]]},"reference":[{"key":"1_CR1","doi-asserted-by":"publisher","first-page":"1304","DOI":"10.1126\/science.1058040","volume":"291","author":"J. C. Venter","year":"2001","unstructured":"J. Craig Venter et al. The sequence of the Human Genome Science, 291:1304\u20131351 (2001)","journal-title":"Science"},{"key":"1_CR2","doi-asserted-by":"publisher","first-page":"860","DOI":"10.1038\/35057062","volume":"409","author":"International Human Genome Sequencing Consortium","year":"2001","unstructured":"International Human Genome Sequencing Consortium. Initial sequencing and analysis of the human genome Nature, 409:860\u2013921 (2001)","journal-title":"Nature"},{"key":"1_CR3","doi-asserted-by":"publisher","first-page":"443","DOI":"10.1016\/0022-2836(70)90057-4","volume":"48","author":"S. B. Needleman","year":"1970","unstructured":"S. B. Needleman and C. D. Wunsch. A general method applicable to the search for similarities in the amino acid sequence of two proteins. Journal of Molecular Biology, 48:443\u2013453 (1970)","journal-title":"Journal of Molecular Biology"},{"key":"1_CR4","doi-asserted-by":"publisher","first-page":"195","DOI":"10.1016\/0022-2836(81)90087-5","volume":"147","author":"T. F. Smith","year":"1981","unstructured":"T. F. Smith and M. S. Waterman. Identification of common molecular subsequences. Journal of Molecular Biology, 147:195\u2013197 (1981)","journal-title":"Journal of Molecular Biology"},{"key":"1_CR5","doi-asserted-by":"publisher","first-page":"2444","DOI":"10.1073\/pnas.85.8.2444","volume":"85","author":"W. R. Pearson","year":"1988","unstructured":"W. R. Pearson and D. J. Lipman. Improved tools for biological sequence comparison. Proceeding of the National Academy of Sciences, 85:2444\u20132448 (1988)","journal-title":"Proceeding of the National Academy of Sciences"},{"key":"1_CR6","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","volume":"215","author":"S. F. Altschul","year":"1990","unstructured":"S. F. Altschul, W. Gis, E. W. Myers, and D. J. Lipman. Basic local alignment search tool. Journal of Molecular Biology, 215:403\u2013410 (1990)","journal-title":"Journal of Molecular Biology"},{"key":"1_CR7","doi-asserted-by":"publisher","first-page":"705","DOI":"10.1016\/0022-2836(82)90398-9","volume":"162","author":"O. Gotoh","year":"1982","unstructured":"O. Gotoh. An improved algorithm for matching biological sequences. Journal of Molecular Biology, 162:705\u2013708 (1982)","journal-title":"Journal of Molecular Biology"},{"issue":"6","key":"1_CR8","doi-asserted-by":"crossref","first-page":"341","DOI":"10.1145\/360825.360861","volume":"18","author":"D. S. Hirschberg","year":"1975","unstructured":"Daniel S. Hirschberg. A Linear Space Algorithm for Computing Maximal Common Subsequences. CACM 18(6): 341\u2013343 (1975)","journal-title":"CACM"},{"key":"1_CR9","doi-asserted-by":"publisher","first-page":"9061","DOI":"10.1073\/pnas.93.17.9061","volume":"93","author":"M. S. Gelfand","year":"1996","unstructured":"M. S. Gelfand, A. A. Mironov, and P. A. Pevzner. Spliced alignment: A new approach to gene recognition. Proc. Natl. Acad. Sci. 93:9061\u20139066 (1996)","journal-title":"Proc. Natl. Acad. Sci."},{"key":"1_CR10","first-page":"55","volume":"5","author":"E. Birney","year":"1997","unstructured":"E. Birney and R. Durbin. Dynamite: a flexible code generating language for dynamic programming methods used in sequence comparison. Proc. Fifth Int. Conf. Intelligent Systems Mol. Biol. 5:55\u201364 (1997)","journal-title":"Proc. Fifth Int. Conf. Intelligent Systems Mol. Biol."},{"key":"1_CR11","first-page":"477","volume":"13","author":"R. Mott","year":"1997","unstructured":"R. Mott. EST_GENOME: A program to align spliced DNA sequences to unspliced genomic DNA. Comput. Appl. Biosci. 13:477\u2013478 (1997)","journal-title":"Comput. Appl. Biosci."},{"issue":"9","key":"1_CR12","doi-asserted-by":"crossref","first-page":"967","DOI":"10.1101\/gr.8.9.967","volume":"8","author":"L. Florea","year":"1998","unstructured":"L. Florea, G. Hartzell, Z. Zhang, G. M. Rubin, and W. Miller. A computer program for aligning a cDNA sequence with a genomic sequence. Genome Research, 8(9):967\u2013974 (1998)","journal-title":"Genome Research"},{"key":"1_CR13","unstructured":"W. James Kent. UCSC Human Genome Browser, \n                  http:\/\/genome.ucsc.edu\/"},{"key":"1_CR14","doi-asserted-by":"publisher","first-page":"353","DOI":"10.1006\/geno.1996.0298","volume":"34","author":"M. Burset","year":"1996","unstructured":"M. Burset and R. Guigo. Evaluation of gene structure prediction programs. Genomics, 34:353\u2013357 (1996).","journal-title":"Genomics"},{"key":"1_CR15","doi-asserted-by":"publisher","first-page":"2627","DOI":"10.1093\/nar\/27.13.2627","volume":"27","author":"T. A. Thanaraj","year":"1999","unstructured":"T. A. Thanaraj. A clean data set of EST-confirmed splice sites from Homo sapiens and standards for clean-up procedures. Nucl. Acids. Res. 27: 2627\u20132637 (1999).","journal-title":"Nucl. Acids. Res."},{"key":"1_CR16","doi-asserted-by":"publisher","first-page":"451","DOI":"10.1093\/hmg\/11.4.451","volume":"11","author":"F. Clark","year":"2002","unstructured":"F. Clark and T. A. Thanaraj. Categorization and characterization of transcript-confirmed constitutively and alternatively spliced introns and exons from human. Hum. Mol. Genet. 11: 451\u2013464 (2002)","journal-title":"Hum. Mol. Genet."},{"key":"1_CR17","doi-asserted-by":"publisher","first-page":"255","DOI":"10.1093\/nar\/29.1.255","volume":"29","author":"M. Burset","year":"2001","unstructured":"M. Burset, I. A. Seledtsov, and V. V. Solovyev. SpliceDB: database of canonical and non-canonical mammalian splice sites. Nucl. Acids. Res. 29: 255\u2013259 (2001).","journal-title":"Nucl. Acids. Res."},{"key":"1_CR18","doi-asserted-by":"publisher","first-page":"817","DOI":"10.1101\/gr.147901","volume":"11","author":"S. Rogic","year":"2001","unstructured":"S. Rogic, A. Mackworth and F. Ouellette. Evaluation of gene finding programs. Genome Research, 11: 817\u2013832 (2001).","journal-title":"Genome Research"},{"issue":"1","key":"1_CR19","doi-asserted-by":"publisher","first-page":"221","DOI":"10.1093\/nar\/30.1.221","volume":"30","author":"T. Honkura","year":"2002","unstructured":"T. Honkura, J. Ogasawara, T. Yamada, and S. Morishita. The Gene Resource Locator: gene locus maps for transcriptome analysis. Nucl. Acids. Res., 30(1):221\u2013225 (2002)","journal-title":"Nucl. Acids. Res."}],"container-title":["Lecture Notes in Computer Science","Combinatorial Pattern Matching"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/3-540-45452-7_1","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,2,16]],"date-time":"2019-02-16T17:54:37Z","timestamp":1550339677000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/3-540-45452-7_1"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2002]]},"ISBN":["9783540438625","9783540454526"],"references-count":19,"URL":"https:\/\/doi.org\/10.1007\/3-540-45452-7_1","relation":{},"ISSN":["0302-9743"],"issn-type":[{"type":"print","value":"0302-9743"}],"subject":[],"published":{"date-parts":[[2002]]}}}