{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,22]],"date-time":"2026-10-22T18:38:39Z","timestamp":1792694319839,"version":"4.5.0"},"publisher-location":"New York, NY","reference-count":18,"publisher":"Springer US","isbn-type":[{"value":"9781071656624","type":"print"},{"value":"9781071656631","type":"electronic"}],"license":[{"start":{"date-parts":[[2026,10,23]],"date-time":"2026-10-23T00:00:00Z","timestamp":1792713600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2026,10,23]],"date-time":"2026-10-23T00:00:00Z","timestamp":1792713600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2027]]},"DOI":"10.1007\/978-1-0716-5663-1_25","type":"book-chapter","created":{"date-parts":[[2026,10,22]],"date-time":"2026-10-22T17:48:49Z","timestamp":1792691329000},"page":"361-390","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Development and Applications of Single Nucleotide Polymorphisms (SNPs) for the Improvement of Fiber Traits in Cotton Crops"],"prefix":"10.1007","author":[{"given":"Tanu Priya","family":"Natarajan","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gokul","family":"Murugesan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Janani Sree","family":"Sivakumar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dhandapani","family":"Gurusamy","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kanakachari","family":"Mogilicherla","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vasanth","family":"Krishnan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,10,23]]},"reference":[{"issue":"1","key":"25_CR1","doi-asserted-by":"publisher","first-page":"5","DOI":"10.1186\/s42397-019-0022-5","volume":"2","author":"S Majeed","year":"2019","unstructured":"Majeed S, Rana IA, Atif RM, Ali Z, Hinze L, Azhar MT (2019) Role of SNPs in determining QTLs for major traits in cotton. J Cotton Res 2(1):5","journal-title":"J Cotton Res"},{"key":"25_CR2","doi-asserted-by":"publisher","first-page":"146042","DOI":"10.1016\/j.gene.2021.146042","volume":"809","author":"J Wang","year":"2022","unstructured":"Wang J, Zhang Z, Gong Z, Liang Y, Ai X, Sang Z, Zheng J (2022) Analysis of the genetic structure and diversity of upland cotton groups in different planting areas based on SNP markers. Gene 809:146042","journal-title":"Gene"},{"issue":"2","key":"25_CR3","first-page":"343558","volume":"2","author":"Y Dwiningsih","year":"2020","unstructured":"Dwiningsih Y, Rahmaningsih M, Alkahtani J (2020) Development of single nucleotide polymorphism (SNP) markers in tropical crops. Adv Sustain Sci Eng Technol 2(2):343558","journal-title":"Adv Sustain Sci Eng Technol"},{"issue":"1","key":"25_CR4","doi-asserted-by":"publisher","DOI":"10.1186\/s12863-016-0448-4","volume":"17","author":"FN Kushanov","year":"2016","unstructured":"Kushanov FN, Pepper AE, Yu JZ, Buriev ZT, Shermatov SE, Saha S, Abdurakhmonov IY (2016) Development, genetic mapping and QTL association of cotton PHYA, PHYB, and HY5-specific CAPS and dCAPS markers. BMC Genet 17(1):141","journal-title":"BMC Genet"},{"issue":"9","key":"25_CR5","doi-asserted-by":"publisher","first-page":"214","DOI":"10.1007\/s00122-024-04717-7","volume":"137","author":"SA Gowda","year":"2024","unstructured":"Gowda SA, Fang H, Tyagi P, Bourland F, Dever J, Campbell BT, Kuraparthy V (2024) Genome-wide association study of fiber quality traits in US upland cotton (Gossypium hirsutum L.). Theor Appl Genet 137(9):214","journal-title":"Theor Appl Genet"},{"key":"25_CR6","doi-asserted-by":"publisher","first-page":"1252746","DOI":"10.3389\/fpls.2023.1252746","volume":"14","author":"B Joshi","year":"2023","unstructured":"Joshi B, Singh S, Tiwari GJ, Kumar H, Boopathi NM, Jaiswal S, Jena SN (2023) Genome-wide association study of fiber yield-related traits uncovers the novel genomic regions and candidate genes in Indian upland cotton (Gossypium hirsutum L.). Front Plant Sci 14:1252746","journal-title":"Front Plant Sci"},{"issue":"1","key":"25_CR7","doi-asserted-by":"publisher","DOI":"10.1186\/s12870-020-02611-0","volume":"20","author":"W Liu","year":"2020","unstructured":"Liu W, Song C, Ren Z, Zhang Z, Pei X, Liu Y, Li W (2020) Genome-wide association study reveals the genetic basis of fiber quality traits in upland cotton (Gossypium hirsutum L.). BMC Plant Biol 20(1):395","journal-title":"BMC Plant Biol"},{"issue":"8","key":"25_CR8","doi-asserted-by":"publisher","first-page":"982","DOI":"10.1111\/pbi.12693","volume":"15","author":"Z Sun","year":"2017","unstructured":"Sun Z, Wang X, Liu Z, Gu Q, Zhang Y, Li Z, Ma Z (2017) Genome-wide association study discovered genetic variation and candidate genes of fibre quality traits in Gossypium hirsutum L. Plant Biotechnol J 15(8):982\u2013996","journal-title":"Plant Biotechnol J"},{"key":"25_CR9","doi-asserted-by":"publisher","first-page":"86","DOI":"10.3389\/fpls.2017.00086","volume":"8","author":"MA Iqbal","year":"2017","unstructured":"Iqbal MA, Rahman MU (2017) Identification of marker-trait associations for lint traits in cotton. Front Plant Sci 8:86","journal-title":"Front Plant Sci"},{"key":"25_CR10","doi-asserted-by":"publisher","first-page":"183","DOI":"10.1007\/978-94-011-0511-8_12","volume-title":"Plant molecular biology manual","author":"SO Rogers","year":"1994","unstructured":"Rogers SO, Bendich AJ (1994) Extraction of total cellular DNA from plants, algae and fungi. In: Gelvin SB, Schilperoort RA (eds.) Plant molecular biology manual. 2nd edn. Kluwer Academic Publishers\/Springer, Dordrecht, Vol. D1, pp 183\u2013190","edition":"2nd edn"},{"issue":"1","key":"25_CR11","doi-asserted-by":"publisher","first-page":"8","DOI":"10.1007\/BF02772108","volume":"15","author":"S Porebski","year":"1997","unstructured":"Porebski S, Bailey LG, Baum BR (1997) Modification of a CTAB DNA extraction protocol for plants containing high polysaccharide and polyphenol components. Plant Mol Biol 15(1):8\u201315","journal-title":"Plant Mol Biol"},{"key":"25_CR12","unstructured":"Gurusamy D (2014) Transcriptome analysis of cotton (Gossypium hirsutum L.) during boll development under drought condition and functional characterization of drought tolerance genes. PhD. thesis, https:\/\/hdl.handle.net\/10603\/215568"},{"key":"25_CR13","doi-asserted-by":"crossref","unstructured":"Sivakumar JS, Gurusamy D, Chellamuthu S, Rathnasamy SA, Krishnan V (2015) Characterization of transgenic cotton plants by Southern blotting. In: Transgenic plants. Springer US, New York, NY, pp 171\u2013181","DOI":"10.1007\/978-1-0716-4803-2_15"},{"key":"25_CR14","doi-asserted-by":"crossref","unstructured":"Sivakumar JS, Gurusamy D, Chellamuthu S, Rathnasamy SA, Krishnan V (2025) Characterization of transgenic cotton plants by PCR. In: Transgenic plants. Springer US, New York, NY, pp 157\u2013170","DOI":"10.1007\/978-1-0716-4803-2_14"},{"issue":"5","key":"25_CR15","doi-asserted-by":"publisher","first-page":"524","DOI":"10.1038\/nbt.3208","volume":"33","author":"F Li","year":"2015","unstructured":"Li F, Fan G, Lu C, Xiao G, Zou C, Kohel RJ, Yu S (2015) Genome sequence of cultivated Upland cotton (Gossypium hirsutum L., TM-1) provides insights into genome evolution. Nat Biotechnol 33(5):524\u2013530","journal-title":"Nat Biotechnol"},{"issue":"3","key":"25_CR16","doi-asserted-by":"publisher","first-page":"1400077","DOI":"10.3732\/apps.1400077","volume":"3","author":"CJ Logan-Young","year":"2015","unstructured":"Logan-Young CJ, Yu JZ, Verma SK, Percy RG, Pepper AE (2015) SNP discovery in complex allotetraploid genomes (Gossypium spp., Malvaceae) using genotyping by sequencing. Appl Plant Sci 3(3):1400077","journal-title":"Appl Plant Sci"},{"issue":"1","key":"25_CR17","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1007\/s11105-007-0003-6","volume":"25","author":"M Gaudet","year":"2007","unstructured":"Gaudet M, Fara AG, Sabatti M, Kuzminsky E, Mugnozza GS (2007) Single-reaction for SNP genotyping on agarose gel by allele-specific PCR in black poplar (Populus nigra L.). Plant Mol Biol Rep 25(1):1\u20139","journal-title":"Plant Mol Biol Rep"},{"issue":"2","key":"25_CR18","doi-asserted-by":"publisher","first-page":"147","DOI":"10.1093\/dnares\/dsu047","volume":"22","author":"H Wang","year":"2015","unstructured":"Wang H, Jin X, Zhang B, Shen C, Lin Z (2015) Enrichment of an intraspecific genetic map of upland cotton by developing markers using parental RAD sequencing. DNA Res 22(2):147\u2013160","journal-title":"DNA Res"}],"container-title":["Methods in Molecular Biology","Molecular Markers in Plants"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/978-1-0716-5663-1_25","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,10,22]],"date-time":"2026-10-22T17:48:50Z","timestamp":1792691330000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/chapter\/10.1007\/978-1-0716-5663-1_25"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,10,23]]},"ISBN":["9781071656624","9781071656631"],"references-count":18,"URL":"https:\/\/doi.org\/10.1007\/978-1-0716-5663-1_25","relation":{},"ISSN":["1064-3745","1940-6029"],"issn-type":[{"value":"1064-3745","type":"print"},{"value":"1940-6029","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,10,23]]},"assertion":[{"value":"23 October 2026","order":1,"name":"first_online","label":"First Online","group":{"name":"ChapterHistory","label":"Chapter History"}}]}}