{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,8,12]],"date-time":"2025-08-12T21:38:52Z","timestamp":1755034732908},"publisher-location":"New York, NY","reference-count":29,"publisher":"Springer New York","isbn-type":[{"type":"print","value":"9781493987085"},{"type":"electronic","value":"9781493987092"}],"license":[{"start":{"date-parts":[[2018,1,1]],"date-time":"2018-01-01T00:00:00Z","timestamp":1514764800000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018]]},"DOI":"10.1007\/978-1-4939-8709-2_8","type":"book-chapter","created":{"date-parts":[[2018,8,23]],"date-time":"2018-08-23T11:22:08Z","timestamp":1535023328000},"page":"119-137","update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":2,"title":["Development of Methods for Selective Gene Expression Profiling in Tertiary Lymphoid Structure Using Laser Capture Microdissection"],"prefix":"10.1007","author":[{"given":"Claudia","family":"Gutierrez-Chavez","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Samantha","family":"Knockaert","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Marie-Caroline","family":"Dieu-Nosjean","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"J\u00e9r\u00e9my","family":"Goc","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2018,8,24]]},"reference":[{"key":"8_CR1","doi-asserted-by":"publisher","first-page":"571","DOI":"10.1016\/j.it.2014.09.006","volume":"35","author":"M-C Dieu-Nosjean","year":"2014","unstructured":"Dieu-Nosjean M-C, Goc J, Giraldo NA et al (2014) Tertiary lymphoid structures in cancer and beyond. Trends Immunol 35:571\u2013580","journal-title":"Trends Immunol"},{"key":"8_CR2","doi-asserted-by":"publisher","first-page":"e26836","DOI":"10.4161\/onci.26836","volume":"2","author":"J Goc","year":"2013","unstructured":"Goc J, Fridman WH, Saut\u00e8s-Fridman C et al (2013) Characteristics of tertiary lymphoid structures in primary cancers. OncoImmunology 2:e26836","journal-title":"OncoImmunology"},{"key":"8_CR3","doi-asserted-by":"publisher","first-page":"447","DOI":"10.1038\/nri3700","volume":"14","author":"C Pitzalis","year":"2014","unstructured":"Pitzalis C, Jones GW, Bombardieri M et al (2014) Ectopic lymphoid-like structures in infection, cancer and autoimmunity. Nat Rev Immunol 14:447\u2013462","journal-title":"Nat Rev Immunol"},{"key":"8_CR4","doi-asserted-by":"publisher","first-page":"646","DOI":"10.3389\/fimmu.2016.00646","volume":"7","author":"A Koenig","year":"2016","unstructured":"Koenig A, Thaunat O (2016) Lymphoid neogenesis and tertiary lymphoid organs in transplanted organs. Front Immunol 7:646","journal-title":"Front Immunol"},{"key":"8_CR5","first-page":"432","volume":"200","author":"VH Engelhard","year":"2018","unstructured":"Engelhard VH, Rodriguez AB, Mauldin IS et al (2018) Immune cell infiltration and tertiary lymphoid structures as determinants of antitumor immunity. J Immunol Baltim Md 1950 200:432\u2013442","journal-title":"J Immunol Baltim Md 1950"},{"key":"8_CR6","doi-asserted-by":"publisher","first-page":"4410","DOI":"10.1200\/JCO.2007.15.0284","volume":"26","author":"M-C Dieu-Nosjean","year":"2008","unstructured":"Dieu-Nosjean M-C, Antoine M, Danel C et al (2008) Long-term survival for patients with non-small-cell lung cancer with intratumoral lymphoid structures. J Clin Oncol Off J Am Soc Clin Oncol 26:4410\u20134417","journal-title":"J Clin Oncol Off J Am Soc Clin Oncol"},{"key":"8_CR7","doi-asserted-by":"publisher","first-page":"705","DOI":"10.1158\/0008-5472.CAN-13-1342","volume":"74","author":"J Goc","year":"2014","unstructured":"Goc J, Germain C, Vo-Bourgais TKD et al (2014) Dendritic cells in tumor-associated tertiary lymphoid structures signal a Th1 cytotoxic immune contexture and license the positive prognostic value of infiltrating CD8+ T cells. Cancer Res 74:705\u2013715","journal-title":"Cancer Res"},{"key":"8_CR8","doi-asserted-by":"publisher","first-page":"4079","DOI":"10.1158\/1078-0432.CCR-12-3847","volume":"19","author":"R Remark","year":"2013","unstructured":"Remark R, Alifano M, Cremer I et al (2013) Characteristics and clinical impacts of the immune environments in colorectal and renal cell carcinoma lung metastases: influence of tumor origin. Clin Cancer Res Off J Am Assoc Cancer Res 19:4079\u20134091","journal-title":"Clin Cancer Res Off J Am Assoc Cancer Res"},{"key":"8_CR9","doi-asserted-by":"publisher","first-page":"832","DOI":"10.1164\/rccm.201309-1611OC","volume":"189","author":"C Germain","year":"2014","unstructured":"Germain C, Gnjatic S, Tamzalit F et al (2014) Presence of B cells in tertiary lymphoid structures is associated with a protective immunity in patients with lung cancer. Am J Respir Crit Care Med 189:832\u2013844","journal-title":"Am J Respir Crit Care Med"},{"key":"8_CR10","doi-asserted-by":"publisher","first-page":"2873","DOI":"10.1172\/JCI67428","volume":"123","author":"C Gu-Trantien","year":"2013","unstructured":"Gu-Trantien C, Loi S, Garaud S et al (2013) CD4+ follicular helper T cell infiltration predicts breast cancer survival. J Clin Invest 123:2873\u20132892","journal-title":"J Clin Invest"},{"key":"8_CR11","doi-asserted-by":"publisher","first-page":"6391","DOI":"10.1158\/1538-7445.AM2011-4496","volume":"71","author":"CL de","year":"2011","unstructured":"de CL, Goc J, Damotte D et al (2011) Characterization of chemokines and adhesion molecules associated with T cell presence in tertiary lymphoid structures in human lung cancer. Cancer Res 71:6391\u20136399","journal-title":"Cancer Res"},{"key":"8_CR12","doi-asserted-by":"publisher","first-page":"3997","DOI":"10.1158\/0008-5472.CAN-12-1377","volume":"72","author":"A Cipponi","year":"2012","unstructured":"Cipponi A, Mercier M, Seremet T et al (2012) Neogenesis of lymphoid structures and antibody responses occur in human melanoma metastases. Cancer Res 72:3997\u20134007","journal-title":"Cancer Res"},{"key":"8_CR13","doi-asserted-by":"publisher","first-page":"491","DOI":"10.3389\/fimmu.2016.00491","volume":"7","author":"NH Ruddle","year":"2016","unstructured":"Ruddle NH (2016) High endothelial venules and lymphatic vessels in tertiary lymphoid organs: characteristics, functions, and regulation. Front Immunol 7:491","journal-title":"Front Immunol"},{"key":"8_CR14","doi-asserted-by":"publisher","first-page":"927","DOI":"10.1038\/nm1091","volume":"10","author":"JE Moyron-Quiroz","year":"2004","unstructured":"Moyron-Quiroz JE, Rangel-Moreno J, Kusser K et al (2004) Role of inducible bronchus associated lymphoid tissue (iBALT) in respiratory immunity. Nat Med 10:927\u2013934","journal-title":"Nat Med"},{"key":"8_CR15","doi-asserted-by":"publisher","first-page":"2147","DOI":"10.1158\/1078-0432.CCR-13-2590","volume":"20","author":"G Caro Di","year":"2014","unstructured":"Di Caro G, Bergomas F, Grizzi F et al (2014) Occurrence of tertiary lymphoid tissue is associated to T cell infiltration and predicts better prognosis in early stage colorectal cancers. Clin Cancer Res Off J Am Assoc Cancer Res 20:2147\u20132158","journal-title":"Clin Cancer Res Off J Am Assoc Cancer Res"},{"key":"8_CR16","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1007\/978-1-61779-163-5_1","volume":"755","author":"K Decarlo","year":"2011","unstructured":"Decarlo K, Emley A, Dadzie OE et al (2011) Laser capture microdissection: methods and applications. Methods Mol Biol Clifton NJ 755:1\u201315","journal-title":"Methods Mol Biol Clifton NJ"},{"key":"8_CR17","doi-asserted-by":"publisher","first-page":"586","DOI":"10.1038\/nprot.2006.85","volume":"1","author":"V Espina","year":"2006","unstructured":"Espina V, Wulfkuhle JD, Calvert VS et al (2006) Laser-capture microdissection. Nat Protoc 1:586\u2013603","journal-title":"Nat Protoc"},{"key":"8_CR18","doi-asserted-by":"publisher","first-page":"25A.1.1","DOI":"10.1002\/0471142727.mb25a01s112","volume":"112","author":"AR Frost","year":"2015","unstructured":"Frost AR, Eltoum I-E, Siegal GP et al (2015) Laser microdissection. Curr Protoc Mol Biol 112:25A.1.1\u201325A.130","journal-title":"Curr Protoc Mol Biol"},{"key":"8_CR19","doi-asserted-by":"publisher","first-page":"1207","DOI":"10.1038\/ni.3836","volume":"18","author":"A Johansson-Percival","year":"2017","unstructured":"Johansson-Percival A, He B, Li Z-J et al (2017) De novo induction of intratumoral lymphoid structures and vessel normalization enhances immunotherapy in resistant tumors. Nat Immunol 18:1207\u20131217","journal-title":"Nat Immunol"},{"key":"8_CR20","doi-asserted-by":"publisher","first-page":"125","DOI":"10.1084\/jem.20100052","volume":"208","author":"M Lochner","year":"2011","unstructured":"Lochner M, Ohnmacht C, Presley L et al (2011) Microbiota-induced tertiary lymphoid tissues aggravate inflammatory disease in the absence of ROR\u03b3t and LTi cells. J Exp Med 208:125\u2013134","journal-title":"J Exp Med"},{"key":"8_CR21","doi-asserted-by":"publisher","first-page":"1126","DOI":"10.1164\/rccm.201302-0403OC","volume":"188","author":"KL Colvin","year":"2013","unstructured":"Colvin KL, Cripe PJ, Ivy DD et al (2013) Bronchus-associated lymphoid tissue in pulmonary hypertension produces pathologic autoantibodies. Am J Respir Crit Care Med 188:1126\u20131136","journal-title":"Am J Respir Crit Care Med"},{"key":"8_CR22","doi-asserted-by":"publisher","first-page":"e87234","DOI":"10.1172\/jci.insight.87234","volume":"1","author":"K Lehmann-Horn","year":"2016","unstructured":"Lehmann-Horn K, Wang S-Z, Sagan SA et al (2016) B cell repertoire expansion occurs in meningeal ectopic lymphoid tissue. JCI Insight 1:e87234","journal-title":"JCI Insight"},{"key":"8_CR23","doi-asserted-by":"publisher","first-page":"11276","DOI":"10.3390\/ijms160511276","volume":"16","author":"R Spear","year":"2015","unstructured":"Spear R, Boytard L, Blervaque R et al (2015) Adventitial tertiary lymphoid organs as potential source of microRNA biomarkers for abdominal aortic aneurysm. Int J Mol Sci 16:11276\u201311293","journal-title":"Int J Mol Sci"},{"key":"8_CR24","doi-asserted-by":"publisher","first-page":"1174","DOI":"10.1161\/ATVBAHA.115.306983","volume":"36","author":"P Srikakulapu","year":"2016","unstructured":"Srikakulapu P, Hu D, Yin C et al (2016) Artery tertiary lymphoid organs control multilayered territorialized atherosclerosis B-cell responses in aged ApoE\u2212\/\u2212 mice. Arterioscler Thromb Vasc Biol 36:1174\u20131185","journal-title":"Arterioscler Thromb Vasc Biol"},{"key":"8_CR25","doi-asserted-by":"publisher","first-page":"1100","DOI":"10.1016\/j.immuni.2015.05.015","volume":"42","author":"D Hu","year":"2015","unstructured":"Hu D, Mohanta SK, Yin C et al (2015) Artery tertiary lymphoid organs control aorta immunity and protect against atherosclerosis via vascular smooth muscle cell lymphotoxin \u03b2 receptors. Immunity 42:1100\u20131115","journal-title":"Immunity"},{"key":"8_CR26","doi-asserted-by":"publisher","first-page":"1013","DOI":"10.4049\/jimmunol.1501570","volume":"196","author":"JL Kielczewski","year":"2016","unstructured":"Kielczewski JL, Horai R, Jittayasothorn Y et al (2016) Tertiary lymphoid tissue forms in retinas of mice with spontaneous autoimmune uveitis and has consequences on visual function. J Immunol 196:1013\u20131025","journal-title":"J Immunol"},{"key":"8_CR27","doi-asserted-by":"publisher","first-page":"333","DOI":"10.1038\/nrg.2016.49","volume":"17","author":"S Goodwin","year":"2016","unstructured":"Goodwin S, McPherson JD, McCombie WR (2016) Coming of age: ten years of next-generation sequencing technologies. Nat Rev Genet 17:333\u2013351","journal-title":"Nat Rev Genet"},{"key":"8_CR28","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1186\/1471-2199-8-25","volume":"8","author":"DM Kube","year":"2007","unstructured":"Kube DM, Savci-Heijink CD, Lamblin A-F et al (2007) Optimization of laser capture microdissection and RNA amplification for gene expression profiling of prostate cancer. BMC Mol Biol 8:25","journal-title":"BMC Mol Biol"},{"key":"8_CR29","doi-asserted-by":"publisher","first-page":"1101","DOI":"10.1038\/nprot.2008.73","volume":"3","author":"TD Schmittgen","year":"2008","unstructured":"Schmittgen TD, Livak KJ (2008) Analyzing real-time PCR data by the comparative C(T) method. Nat Protoc 3:1101\u20131108","journal-title":"Nat Protoc"}],"container-title":["Methods in Molecular Biology","Tertiary Lymphoid Structures"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-1-4939-8709-2_8","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2018,8,23]],"date-time":"2018-08-23T11:25:26Z","timestamp":1535023526000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-1-4939-8709-2_8"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018]]},"ISBN":["9781493987085","9781493987092"],"references-count":29,"URL":"https:\/\/doi.org\/10.1007\/978-1-4939-8709-2_8","relation":{},"ISSN":["1064-3745","1940-6029"],"issn-type":[{"type":"print","value":"1064-3745"},{"type":"electronic","value":"1940-6029"}],"subject":[],"published":{"date-parts":[[2018]]}}}