{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,2,21]],"date-time":"2025-02-21T00:52:59Z","timestamp":1740099179271,"version":"3.37.3"},"publisher-location":"Cham","reference-count":20,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783030000622"},{"type":"electronic","value":"9783030000639"}],"license":[{"start":{"date-parts":[[2018,1,1]],"date-time":"2018-01-01T00:00:00Z","timestamp":1514764800000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018]]},"DOI":"10.1007\/978-3-030-00063-9_10","type":"book-chapter","created":{"date-parts":[[2018,8,30]],"date-time":"2018-08-30T05:39:46Z","timestamp":1535607586000},"page":"80-87","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["Streaming FDR Calculation for Protein Identification"],"prefix":"10.1007","author":[{"given":"Roman","family":"Zoun","sequence":"first","affiliation":[]},{"given":"Kay","family":"Schallert","sequence":"additional","affiliation":[]},{"given":"Atin","family":"Janki","sequence":"additional","affiliation":[]},{"given":"Rohith","family":"Ravindran","sequence":"additional","affiliation":[]},{"given":"Gabriel","family":"Campero Durand","sequence":"additional","affiliation":[]},{"given":"Wolfram","family":"Fenske","sequence":"additional","affiliation":[]},{"given":"David","family":"Broneske","sequence":"additional","affiliation":[]},{"given":"Robert","family":"Heyer","sequence":"additional","affiliation":[]},{"given":"Dirk","family":"Benndorf","sequence":"additional","affiliation":[]},{"given":"Gunter","family":"Saake","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2018,8,31]]},"reference":[{"issue":"6928","key":"10_CR1","doi-asserted-by":"publisher","first-page":"198","DOI":"10.1038\/nature01511","volume":"422","author":"R Aebersold","year":"2003","unstructured":"Aebersold, R., Mann, M.: Mass spectrometry-based proteomics. Nature 422(6928), 198 (2003)","journal-title":"Nature"},{"issue":"18","key":"10_CR2","doi-asserted-by":"publisher","first-page":"3551","DOI":"10.1002\/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2","volume":"20","author":"JS Cottrell","year":"1999","unstructured":"Cottrell, J.S., London, U.: Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20(18), 3551\u20133567 (1999)","journal-title":"Electrophoresis"},{"issue":"12","key":"10_CR3","doi-asserted-by":"publisher","first-page":"1612","DOI":"10.1074\/mcp.R112.019695","volume":"11","author":"EW Deutsch","year":"2012","unstructured":"Deutsch, E.W.: File formats commonly used in mass spectrometry proteomics. Mol. Cell. Proteomics 11(12), 1612\u20131621 (2012)","journal-title":"Mol. Cell. Proteomics"},{"key":"10_CR4","doi-asserted-by":"publisher","unstructured":"Eisenacher, M., Kohl, M., Turewicz, M., Koch, M., Uszkoreit, J., Stephan, C.: Search and decoy: the automatic identification of mass spectra. Methods Mol. Biol. (2012). \nhttps:\/\/doi.org\/10.1007\/978-1-61779-885-6_28","DOI":"10.1007\/978-1-61779-885-6_28"},{"key":"10_CR5","doi-asserted-by":"publisher","first-page":"55","DOI":"10.1007\/978-1-60761-444-9_5","volume":"604","author":"J Elias","year":"2010","unstructured":"Elias, J., Gygi, S.: Target-decoy search strategy for mass spectrometry-based proteomics. Methods Mol. Biol. 604, 55\u201371 (2010). \nhttps:\/\/doi.org\/10.1007\/978-1-60761-444-9_5","journal-title":"Methods Mol. Biol."},{"issue":"11","key":"10_CR6","doi-asserted-by":"publisher","first-page":"976","DOI":"10.1016\/1044-0305(94)80016-2","volume":"5","author":"JK Eng","year":"1994","unstructured":"Eng, J.K., McCormack, A.L., Yates, J.R.: An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J. Am. Soc. Mass Spectrom. 5(11), 976\u2013989 (1994)","journal-title":"J. Am. Soc. Mass Spectrom."},{"key":"10_CR7","volume-title":"Fast Data Processing Systems with SMACK Stack","author":"R Estrada","year":"2016","unstructured":"Estrada, R.: Fast Data Processing Systems with SMACK Stack. Packt Publishing, Birmingham (2016)"},{"issue":"4","key":"10_CR8","doi-asserted-by":"publisher","first-page":"1792","DOI":"10.1021\/pr501164r","volume":"14","author":"G Gonnelli","year":"2015","unstructured":"Gonnelli, G.: A decoy-free approach to the identification of peptides. J. Proteome Res. 14(4), 1792\u20131798 (2015)","journal-title":"J. Proteome Res."},{"key":"10_CR9","doi-asserted-by":"publisher","unstructured":"Heyer, R., Kohrs, F., Reichl, U., Benndorf, D.: Metaproteomics of complex microbial communities in biogas plants. Microb. Technol. 8 (2015). \nhttps:\/\/doi.org\/10.1111\/1751-7915.12276","DOI":"10.1111\/1751-7915.12276"},{"key":"10_CR10","doi-asserted-by":"publisher","unstructured":"Heyer, R., Schallert, K., Zoun, R., Becher, B., Saake, G., Benndorf, D.: Challenges and perspectives of metaproteomic data analysis. J. Biotechnol. 261(Supplement C), 24\u201336 (2017). \nhttps:\/\/doi.org\/10.1016\/j.jbiotec.2017.06.1201\n\n. Bioinformatics Solutions for Big Data Analysis in Life Sciences presented by the German Network for Bioinformatics Infrastructure","DOI":"10.1016\/j.jbiotec.2017.06.1201"},{"key":"10_CR11","unstructured":"Kipf, A., Pandey, V., Boettcher, J., Braun, L., Neumann, T., Kemper, A.: Analytics on fast data: main-memory database systems versus modern streaming systems (2017)"},{"key":"10_CR12","doi-asserted-by":"publisher","first-page":"486","DOI":"10.1007\/s00248-006-9196-8","volume":"53","author":"PA Maron","year":"2007","unstructured":"Maron, P.A., Ranjard, L., Mougel, C., Lemanceau, P.: Metaproteomics: a new approach for studying functional microbial ecology. Microb. Ecol. 53, 486\u2013493 (2007)","journal-title":"Microb. Ecol."},{"key":"10_CR13","unstructured":"Matrix Science: Data File Format (2016). \nhttp:\/\/www.matrixscience.com\/help\/data_file_help.html"},{"key":"10_CR14","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.chroma.2013.03.073","volume":"1293","author":"R Millioni","year":"2013","unstructured":"Millioni, R., Franchin, C., Tessari, P., Polati, R., Cecconi, D., Arrigoni, G.: Pros and cons of peptide isolectric focusing in shotgun proteomics. J. Chromatogr. A 1293, 1\u20139 (2013). \nhttps:\/\/doi.org\/10.1016\/j.chroma.2013.03.073","journal-title":"J. Chromatogr. A"},{"key":"10_CR15","unstructured":"National Center for Biotechnology Information: Fasta Format, November 2002. \nhttps:\/\/blast.ncbi.nlm.nih.gov"},{"key":"10_CR16","doi-asserted-by":"publisher","unstructured":"Petriz, B.A., Franco, O.L.: Metaproteomics as a complementary approach to gut microbiota in health and disease. Front. Chem. (2017). \nhttps:\/\/doi.org\/10.3389\/fchem.2017.00004","DOI":"10.3389\/fchem.2017.00004"},{"issue":"20","key":"10_CR17","doi-asserted-by":"publisher","first-page":"2310","DOI":"10.1002\/rcm.1198","volume":"17","author":"C Robertson","year":"2003","unstructured":"Robertson, C., Ronald, C.B.: A method for reducing the time required to match protein sequences with tandem mass spectra. Rapid Commun. Mass Spectrom. 17(20), 2310\u20132316 (2003)","journal-title":"Rapid Commun. Mass Spectrom."},{"key":"10_CR18","unstructured":"Wampler, D.: Fast data: big data evolved. White Paper (2015)"},{"key":"10_CR19","volume-title":"Fast Data Architectures for Streaming Applications","author":"D Wampler","year":"2016","unstructured":"Wampler, D.: Fast Data Architectures for Streaming Applications, 1st edn. OReilly Media, Sebastopol (2016)","edition":"1"},{"key":"10_CR20","doi-asserted-by":"publisher","first-page":"91","DOI":"10.1016\/j.coal.2015.05.006","volume":"146","author":"J Zhang","year":"2015","unstructured":"Zhang, J., Liang, Y., Yau, P., Pandey, R., Harpalani, S.: A metaproteomic approach for identifying proteins in anaerobic bioreactors converting coal to methane. Int. J. Coal Geol. 146, 91\u2013103 (2015)","journal-title":"Int. J. Coal Geol."}],"container-title":["Communications in Computer and Information Science","New Trends in Databases and Information Systems"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-030-00063-9_10","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2018,8,30]],"date-time":"2018-08-30T05:45:05Z","timestamp":1535607905000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-030-00063-9_10"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018]]},"ISBN":["9783030000622","9783030000639"],"references-count":20,"URL":"https:\/\/doi.org\/10.1007\/978-3-030-00063-9_10","relation":{},"ISSN":["1865-0929","1865-0937"],"issn-type":[{"type":"print","value":"1865-0929"},{"type":"electronic","value":"1865-0937"}],"subject":[],"published":{"date-parts":[[2018]]}}}