{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,7,2]],"date-time":"2025-07-02T23:01:35Z","timestamp":1751497295242},"publisher-location":"Cham","reference-count":16,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783030244088"},{"type":"electronic","value":"9783030244095"}],"license":[{"start":{"date-parts":[[2019,8,2]],"date-time":"2019-08-02T00:00:00Z","timestamp":1564704000000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2020]]},"DOI":"10.1007\/978-3-030-24409-5_13","type":"book-chapter","created":{"date-parts":[[2019,8,1]],"date-time":"2019-08-01T05:03:14Z","timestamp":1564635794000},"page":"139-148","update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":7,"title":["End-to-End Joint Entity Extraction and Negation Detection for Clinical Text"],"prefix":"10.1007","author":[{"given":"Parminder","family":"Bhatia","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"E.","family":"Busra Celikkaya","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mohammed","family":"Khalilia","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2019,8,2]]},"reference":[{"key":"13_CR1","unstructured":"Chalapathy, R., Borzeshi, E.Z., Piccardi, M.: Bidirectional LSTM-CRF for clinical concept extraction. \n                  arXiv:1611.08373\n                  \n                 (2016)"},{"issue":"5","key":"13_CR2","doi-asserted-by":"publisher","first-page":"301","DOI":"10.1006\/jbin.2001.1029","volume":"34","author":"WW Chapman","year":"2001","unstructured":"Chapman, W.W., Bridewell, W., Hanbury, P., Cooper, G.F., Buchanan, B.G.: A simple algorithm for identifying negated findings and diseases in discharge summaries. J. Biomed. Inf. 34(5), 301\u2013310 (2001)","journal-title":"J. Biomed. Inf."},{"key":"13_CR3","unstructured":"Cheng, K., Baldwin, T., Verspoor, K.: Automatic negation and speculation detection in veterinary clinical text. In: Proceedings of the Australasian Language Technology Association Workshop 2017, pp. 70\u201378 (2017)"},{"issue":"5","key":"13_CR4","doi-asserted-by":"publisher","first-page":"557","DOI":"10.1136\/amiajnl-2011-000150","volume":"18","author":"B Bruijn de","year":"2011","unstructured":"de Bruijn, B., Cherry, C., Kiritchenko, S., Martin, J., Zhu, X.: Machine-learned solutions for three stages of clinical information extraction: the state of the art at i2b2 2010. J. Am. Med. Inf. Assoc. 18(5), 557\u2013562 (2011)","journal-title":"J. Am. Med. Inf. Assoc."},{"key":"13_CR5","doi-asserted-by":"crossref","unstructured":"Fancellu, F., Lopez, A., Webber, B.: Neural networks for negation scope detection. In: Proceedings of the 54th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), vol. 1, pp. 495\u2013504 (2016)","DOI":"10.18653\/v1\/P16-1047"},{"key":"13_CR6","doi-asserted-by":"crossref","unstructured":"Gkotsis, G., Velupillai, S., Oellrich, A., Dean, H., Liakata, M., Dutta, R.: Don\u2019t let notes be misunderstood: a negation detection method for assessing risk of suicide in mental health records. In: Proceedings of the Third Workshop on Computational Lingusitics and Clinical Psychology, pp. 95\u2013105 (2016)","DOI":"10.18653\/v1\/W16-0310"},{"issue":"5","key":"13_CR7","doi-asserted-by":"publisher","first-page":"839","DOI":"10.1016\/j.jbi.2009.05.002","volume":"42","author":"H Harkema","year":"2009","unstructured":"Harkema, H., Dowling, J.N., Thornblade, T., Chapman, W.W.: Context: an algorithm for determining negation, experiencer, and temporal status from clinical reports. J. Biomed. Inf. 42(5), 839\u2013851 (2009)","journal-title":"J. Biomed. Inf."},{"key":"13_CR8","doi-asserted-by":"crossref","unstructured":"Lample, G., Ballesteros, M., Subramanian, S., Kawakami, K., Dyer, C.: Neural architectures for named entity recognition. In: Proceedings of NAACL-HLT, pp. 260\u2013270 (2016)","DOI":"10.18653\/v1\/N16-1030"},{"key":"13_CR9","doi-asserted-by":"crossref","unstructured":"Peng, N., Dredze, M.: Multi-task domain adaptation for sequence tagging. In: Proceedings of the 2nd Workshop on Representation Learning for NLP, pp. 91\u2013100 (2017)","DOI":"10.18653\/v1\/W17-2612"},{"key":"13_CR10","unstructured":"Peng, Y., Wang, X., Lu, L., Bagheri, M., Summers, R., Lu, Z.: NegBio: a high-performance tool for negation and uncertainty detection in radiology reports. AMIA Jt. Summits Transl. Sci. Proc. 2017, 188 (2018)"},{"key":"13_CR11","unstructured":"Rumeng, L., Jagannatha\u00a0Abhyuday, N., Hong, Y.: A hybrid neural network model for joint prediction of presence and period assertions of medical events in clinical notes. In: AMIA Annual Symposium Proceedings, vol. 2017, p. 1149. American Medical Informatics Association (2017)"},{"key":"13_CR12","doi-asserted-by":"crossref","unstructured":"Shivade, C., de\u00a0Marneffe, M.-C., Fosler-Lussier, E., Lai, A.M.: Extending NegEx with kernel methods for negation detection in clinical text. In: Proceedings of the Second Workshop on Extra-Propositional Aspects of Meaning in Computational Semantics (ExProM 2015), pp. 41\u201346 (2015)","DOI":"10.3115\/v1\/W15-1305"},{"key":"13_CR13","unstructured":"Snoek, J., Larochelle, H., Adams, R.P.: Practical Bayesian optimization of machine learning algorithms. Advances in Neural Information Processing Systems, pp. 2951\u20132959 (2012)"},{"issue":"2","key":"13_CR14","doi-asserted-by":"publisher","first-page":"270","DOI":"10.1162\/neco.1989.1.2.270","volume":"1","author":"RJ Williams","year":"1989","unstructured":"Williams, R.J., Zipser, D.: A learning algorithm for continually running fully recurrent neural networks. Neural Comput. 1(2), 270\u2013280 (1989)","journal-title":"Neural Comput."},{"issue":"11","key":"13_CR15","doi-asserted-by":"publisher","first-page":"e112774","DOI":"10.1371\/journal.pone.0112774","volume":"9","author":"S Wu","year":"2014","unstructured":"Wu, S., Miller, T., Masanz, J., Coarr, M., Halgrim, S., Carrell, D., Clark, C.: Negation\u2019s not solved: generalizability versus optimizability in clinical natural language processing. PloS One 9(11), e112774 (2014)","journal-title":"PloS One"},{"key":"13_CR16","unstructured":"Yang, Z., Salakhutdinov, R., Cohen, W.: Multi-task cross-lingual sequence tagging from scratch. \n                  arXiv:1603.06270\n                  \n                 (2016)"}],"container-title":["Studies in Computational Intelligence","Precision Health and Medicine"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-030-24409-5_13","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,8,1]],"date-time":"2019-08-01T05:24:04Z","timestamp":1564637044000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-030-24409-5_13"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,8,2]]},"ISBN":["9783030244088","9783030244095"],"references-count":16,"URL":"https:\/\/doi.org\/10.1007\/978-3-030-24409-5_13","relation":{},"ISSN":["1860-949X","1860-9503"],"issn-type":[{"type":"print","value":"1860-949X"},{"type":"electronic","value":"1860-9503"}],"subject":[],"published":{"date-parts":[[2019,8,2]]},"assertion":[{"value":"2 August 2019","order":1,"name":"first_online","label":"First Online","group":{"name":"ChapterHistory","label":"Chapter History"}},{"value":"W3PHAI","order":1,"name":"conference_acronym","label":"Conference Acronym","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"International Workshop on Health Intelligence","order":2,"name":"conference_name","label":"Conference Name","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Honolulu, HI","order":3,"name":"conference_city","label":"Conference City","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"USA","order":4,"name":"conference_country","label":"Conference Country","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"2019","order":5,"name":"conference_year","label":"Conference Year","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"27 January 2019","order":7,"name":"conference_start_date","label":"Conference Start Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"1 February 2019","order":8,"name":"conference_end_date","label":"Conference End Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"wphai2019","order":10,"name":"conference_id","label":"Conference ID","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"http:\/\/w3phiai2019.w3phi.com\/","order":11,"name":"conference_url","label":"Conference URL","group":{"name":"ConferenceInfo","label":"Conference Information"}}]}}