{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,3,26]],"date-time":"2025-03-26T18:58:40Z","timestamp":1743015520126,"version":"3.40.3"},"publisher-location":"Cham","reference-count":20,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783030453848"},{"type":"electronic","value":"9783030453855"}],"license":[{"start":{"date-parts":[[2020,1,1]],"date-time":"2020-01-01T00:00:00Z","timestamp":1577836800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"},{"start":{"date-parts":[[2020,1,1]],"date-time":"2020-01-01T00:00:00Z","timestamp":1577836800000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2020]]},"DOI":"10.1007\/978-3-030-45385-5_71","type":"book-chapter","created":{"date-parts":[[2020,5,27]],"date-time":"2020-05-27T12:13:38Z","timestamp":1590581618000},"page":"800-810","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Automated Tracking of Red Blood Cells in Images"],"prefix":"10.1007","author":[{"given":"Franti\u0161ek","family":"Kaj\u00e1nek","sequence":"first","affiliation":[]},{"given":"Ivan","family":"Cimr\u00e1k","sequence":"additional","affiliation":[]},{"given":"Peter","family":"Tar\u00e1bek","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2020,4,30]]},"reference":[{"key":"71_CR1","doi-asserted-by":"publisher","unstructured":"Bensch, R., Ronneberger, O.: Cell segmentation and tracking in phase contrast images using graph cut with asymmetric boundary costs, vol. 2015, April 2015. \nhttps:\/\/doi.org\/10.1109\/ISBI.2015.7164093","DOI":"10.1109\/ISBI.2015.7164093"},{"issue":"3","key":"71_CR2","doi-asserted-by":"publisher","first-page":"900","DOI":"10.1016\/j.cpc.2013.12.013","volume":"185","author":"I Cimr\u00e1k","year":"2014","unstructured":"Cimr\u00e1k, I., Gusenbauer, M., Jan\u010digov\u00e1, I.: An ESPResSo implementation of elastic objects immersed in a fluid. Comput. Phys. Commun. 185(3), 900\u2013907 (2014)","journal-title":"Comput. Phys. Commun."},{"issue":"14","key":"71_CR3","doi-asserted-by":"publisher","first-page":"1525","DOI":"10.1080\/10255842.2016.1165806","volume":"19","author":"I Cimr\u00e1k","year":"2016","unstructured":"Cimr\u00e1k, I.: Collision rates for rare cell capture in periodic obstacle arrays strongly depend on density of cell suspension. Comput. Methods Biomech. Biomed. Eng. 19(14), 1525\u20131530 (2016)","journal-title":"Comput. Methods Biomech. Biomed. Eng."},{"key":"71_CR4","doi-asserted-by":"publisher","first-page":"1925","DOI":"10.1109\/TIP.2010.2099125","volume":"20","author":"A Dufour","year":"2011","unstructured":"Dufour, A., Thibeaux, R., Labruy\u00e8re, E., Guillen, N., Olivo-Marin, J.: 3-D active meshes: fast discrete deformable models for cell tracking in 3-D time-lapse microscopy. IEEE Trans. Image Process. 20, 1925\u20131937 (2011). \nhttps:\/\/doi.org\/10.1109\/TIP.2010.2099125","journal-title":"IEEE Trans. Image Process."},{"key":"71_CR5","doi-asserted-by":"publisher","first-page":"032136","DOI":"10.1103\/PhysRevE.88.032136","volume":"88","author":"JP Gleghorn","year":"2013","unstructured":"Gleghorn, J.P., Smith, J.P., Kirby, B.J.: Transport and collision dynamics in periodic asymmetric obstacle arrays: Rational design of microfluidic rare-cell immunocapture devices. Phys. Rev. E 88, 032136 (2013)","journal-title":"Phys. Rev. E"},{"key":"71_CR6","doi-asserted-by":"publisher","first-page":"165","DOI":"10.1016\/j.trc.2017.07.008","volume":"83","author":"J Janacek","year":"2017","unstructured":"Janacek, J., Kohani, M., Koniorczyk, M., Marton, P.: Optimization of periodic crew schedules with application of column generation method. Transp. Res. Part C 83, 165\u2013178 (2017). \nhttps:\/\/doi.org\/10.1016\/j.trc.2017.07.008","journal-title":"Transp. Res. Part C"},{"key":"71_CR7","doi-asserted-by":"publisher","first-page":"995","DOI":"10.1109\/TMI.2013.2243463","volume":"32","author":"M Ma\u0161ka","year":"2013","unstructured":"Ma\u0161ka, M., Dan\u011bK, O., Garasa, S., Rouzaut, A., Mu\u00f1oz-Barrutia, A., Ortiz-de Solorzano, C.: Segmentation and shape tracking of whole fluorescent cells based on the Chan-Vese model. IEEE Trans. Med. Imaging 32, 995\u20131006 (2013). \nhttps:\/\/doi.org\/10.1109\/TMI.2013.2243463","journal-title":"IEEE Trans. Med. Imaging"},{"key":"71_CR8","doi-asserted-by":"publisher","unstructured":"Kaj\u00e1nek, F., Cimr\u00e1k, I.: Evaluation of detection of red blood cells using convolutional neural networks. In: 2019 International Conference on Information and Digital Technologies (IDT), pp. 198\u2013202, June 2019. \nhttps:\/\/doi.org\/10.1109\/DT.2019.8813664","DOI":"10.1109\/DT.2019.8813664"},{"key":"71_CR9","doi-asserted-by":"publisher","first-page":"218301","DOI":"10.1103\/PhysRevLett.118.218301","volume":"118","author":"KK Kleineberg","year":"2017","unstructured":"Kleineberg, K.K., Buzna, L., Papadopoulos, F., Bogu\u00f1\u00e1, M., Serrano, M.A.: Geometric correlations mitigate the extreme vulnerability of multiplex networks against targeted attacks. Phys. Rev. Lett. 118, 218301 (2017). \nhttps:\/\/doi.org\/10.1103\/PhysRevLett.118.218301","journal-title":"Phys. Rev. Lett."},{"issue":"6","key":"71_CR10","doi-asserted-by":"publisher","first-page":"511","DOI":"10.1007\/s00397-015-0891-6","volume":"55","author":"T Kr\u00fcger","year":"2015","unstructured":"Kr\u00fcger, T.: Effect of tube diameter and capillary number on platelet margination and near-wall dynamics. Rheol. Acta 55(6), 511\u2013526 (2015). \nhttps:\/\/doi.org\/10.1007\/s00397-015-0891-6","journal-title":"Rheol. Acta"},{"issue":"2","key":"71_CR11","doi-asserted-by":"publisher","first-page":"442","DOI":"10.1016\/0005-2795(75)90109-9","volume":"405","author":"B Matthews","year":"1975","unstructured":"Matthews, B.: Comparison of the predicted and observed secondary structure of T4 phage lysozyme. Biochim. Biophys. Acta (BBA) 405(2), 442\u2013451 (1975). \nhttps:\/\/doi.org\/10.1016\/0005-2795(75)90109-9","journal-title":"Biochim. Biophys. Acta (BBA)"},{"key":"71_CR12","doi-asserted-by":"publisher","first-page":"e0144959","DOI":"10.1371\/journal.pone.0144959","volume":"10","author":"P Matula","year":"2015","unstructured":"Matula, P., Ma\u0161ka, M., Sorokin, D., Matula, P., Ortiz-de Solorzano, C., Kozubek, M.: Cell tracking accuracy measurement based on comparison of acyclic oriented graphs. PloS One 10, e0144959 (2015). \nhttps:\/\/doi.org\/10.1371\/journal.pone.0144959","journal-title":"PloS One"},{"issue":"3","key":"71_CR13","first-page":"169","volume":"1","author":"JP Mills","year":"2004","unstructured":"Mills, J.P., Qie, L., Dao, M., Lim, C.T., Suresh, S.: Nonlinear elastic and viscoelastic deformation of the human red blood cell with optical tweezers. Mol. Cell. Biomech. 1(3), 169\u2013180 (2004)","journal-title":"Mol. Cell. Biomech."},{"key":"71_CR14","doi-asserted-by":"publisher","first-page":"1235","DOI":"10.1038\/nature06385","volume":"450","author":"S Nagrath","year":"2007","unstructured":"Nagrath, S., et al.: Isolation of rare circulating tumour cells in cancer patients by microchip technology. Nature 450, 1235\u20131239 (2007). \nhttps:\/\/doi.org\/10.1038\/nature06385","journal-title":"Nature"},{"issue":"4","key":"71_CR15","doi-asserted-by":"publisher","first-page":"367","DOI":"10.1007\/s13206-013-7408-0","volume":"7","author":"D Pinho","year":"2013","unstructured":"Pinho, D., Yaginuma, T., Lima, R.: A microfluidic device for partial cell separation and deformability assessment. BioChip J. 7(4), 367\u2013374 (2013). \nhttps:\/\/doi.org\/10.1007\/s13206-013-7408-0","journal-title":"BioChip J."},{"key":"71_CR16","doi-asserted-by":"publisher","first-page":"948","DOI":"10.1093\/bioinformatics\/btu764","volume":"31","author":"M Schiegg","year":"2014","unstructured":"Schiegg, M., Hanslovsky, P., Haubold, C., K\u00f6the, U., Hufnagel, L., Hamprecht, F.: Graphical model for joint segmentation and tracking of multiple dividing cells. Bioinformatics (Oxford, England) 31, 948\u2013956 (2014). \nhttps:\/\/doi.org\/10.1093\/bioinformatics\/btu764","journal-title":"Bioinformatics (Oxford, England)"},{"key":"71_CR17","doi-asserted-by":"publisher","first-page":"942","DOI":"10.1109\/TMI.2016.2640859","volume":"36","author":"E Turetken","year":"2016","unstructured":"Turetken, E., Wang, X., Becker, C., Haubold, C., Fua, P.: Network flow integer programming to track elliptical cells in time-lapse sequences. IEEE Trans. Med. Imaging 36, 942\u2013951 (2016). \nhttps:\/\/doi.org\/10.1109\/TMI.2016.2640859","journal-title":"IEEE Trans. Med. Imaging"},{"issue":"14","key":"71_CR18","doi-asserted-by":"publisher","first-page":"1789","DOI":"10.1140\/epjst\/e2019-800186-9","volume":"227","author":"F Weik","year":"2019","unstructured":"Weik, F., et al.: ESPResSo 4.0 \u2013 an extensible software package for simulating soft matter systems. Eur. Phys. J. Spec. Top. 227(14), 1789\u20131816 (2019). \nhttps:\/\/doi.org\/10.1140\/epjst\/e2019-800186-9","journal-title":"Eur. Phys. J. Spec. Top."},{"key":"71_CR19","doi-asserted-by":"publisher","first-page":"024201","DOI":"10.1103\/PhysRevFluids.4.024201","volume":"4","author":"Z Zhang","year":"2019","unstructured":"Zhang, Z., Chien, W., Henry, E., Fedosov, D.A., Gompper, G.: Sharp-edged geometric obstacles in microfluidics promote deformability-based sorting of cells. Phys. Rev. Fluids 4, 024201 (2019)","journal-title":"Phys. Rev. Fluids"},{"key":"71_CR20","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1155\/2016\/8182416","volume":"2016","author":"B Zhong","year":"2016","unstructured":"Zhong, B., et al.: Robust individual-cell\/object tracking via PCANet deep network in biomedicine and computer vision. BioMed Res. Int. 2016, 1\u201315 (2016). \nhttps:\/\/doi.org\/10.1155\/2016\/8182416","journal-title":"BioMed Res. Int."}],"container-title":["Lecture Notes in Computer Science","Bioinformatics and Biomedical Engineering"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-030-45385-5_71","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,5,27]],"date-time":"2020-05-27T12:19:58Z","timestamp":1590581998000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-030-45385-5_71"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020]]},"ISBN":["9783030453848","9783030453855"],"references-count":20,"URL":"https:\/\/doi.org\/10.1007\/978-3-030-45385-5_71","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2020]]},"assertion":[{"value":"30 April 2020","order":1,"name":"first_online","label":"First Online","group":{"name":"ChapterHistory","label":"Chapter History"}},{"value":"IWBBIO","order":1,"name":"conference_acronym","label":"Conference Acronym","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"International Work-Conference on Bioinformatics and Biomedical Engineering","order":2,"name":"conference_name","label":"Conference Name","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Granada","order":3,"name":"conference_city","label":"Conference City","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Spain","order":4,"name":"conference_country","label":"Conference Country","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"2020","order":5,"name":"conference_year","label":"Conference Year","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"6 May 2020","order":7,"name":"conference_start_date","label":"Conference Start Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"8 May 2020","order":8,"name":"conference_end_date","label":"Conference End Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"8","order":9,"name":"conference_number","label":"Conference Number","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"iwbbio2020","order":10,"name":"conference_id","label":"Conference ID","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"http:\/\/iwbbio.ugr.es\/","order":11,"name":"conference_url","label":"Conference URL","group":{"name":"ConferenceInfo","label":"Conference Information"}}]}}