{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,3,25]],"date-time":"2025-03-25T14:45:42Z","timestamp":1742913942383,"version":"3.40.3"},"publisher-location":"Cham","reference-count":24,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783030608019"},{"type":"electronic","value":"9783030608026"}],"license":[{"start":{"date-parts":[[2020,1,1]],"date-time":"2020-01-01T00:00:00Z","timestamp":1577836800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"},{"start":{"date-parts":[[2020,1,1]],"date-time":"2020-01-01T00:00:00Z","timestamp":1577836800000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2020]]},"DOI":"10.1007\/978-3-030-60802-6_17","type":"book-chapter","created":{"date-parts":[[2020,10,13]],"date-time":"2020-10-13T18:04:35Z","timestamp":1602612275000},"page":"188-197","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["A Network-Driven Approach for LncRNA-Disease Association Mapping"],"prefix":"10.1007","author":[{"given":"Lin","family":"Yuan","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Tao","family":"Sun","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jing","family":"Zhao","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Song","family":"Liu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ai-Min","family":"Li","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Qin","family":"Lu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yu-Shui","family":"Geng","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xin-Gang","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2020,10,5]]},"reference":[{"issue":"5871","key":"17_CR1","doi-asserted-by":"publisher","first-page":"1785","DOI":"10.1126\/science.1151651","volume":"319","author":"O Hobert","year":"2008","unstructured":"Hobert, O.: Gene regulation by transcription factors and microRNAs. Science 319(5871), 1785\u20131786 (2008)","journal-title":"Science"},{"issue":"12","key":"17_CR2","doi-asserted-by":"publisher","first-page":"812","DOI":"10.1038\/nrc2968","volume":"10","author":"M Swami","year":"2010","unstructured":"Swami, M.: Transcription factors: MYC matters. Nat. Rev. Cancer 10(12), 812 (2010)","journal-title":"Nat. Rev. Cancer"},{"issue":"5617","key":"17_CR3","doi-asserted-by":"publisher","first-page":"286","DOI":"10.1126\/science.1084564","volume":"300","author":"FS Collins","year":"2003","unstructured":"Collins, F.S., Morgan, M., Patrinos, A.: The human genome project: lessons from large-scale biology. Science 300(5617), 286\u2013290 (2003)","journal-title":"Science"},{"issue":"3","key":"17_CR4","doi-asserted-by":"publisher","first-page":"782","DOI":"10.1109\/TCBB.2018.2866836","volume":"16","author":"L Yuan","year":"2019","unstructured":"Yuan, L., Guo, L.H., Yuan, C.A., et al.: Integration of multi-omics data for gene regulatory network inference and application to breast cancer. IEEE\/ACM Trans. Comput. Biol. Bioinf. 16(3), 782\u2013791 (2019)","journal-title":"IEEE\/ACM Trans. Comput. Biol. Bioinf."},{"key":"17_CR5","doi-asserted-by":"crossref","unstructured":"International Human Genome Sequencing Consortium: Initial sequencing and analysis of the human genome. Nature 409(6822), 860 (2001)","DOI":"10.1038\/35057062"},{"issue":"4","key":"17_CR6","doi-asserted-by":"publisher","first-page":"291","DOI":"10.1016\/j.ygeno.2008.11.009","volume":"93","author":"R Louro","year":"2009","unstructured":"Louro, R., Smirnova, A.S., Verjovski-Almeida, S.: Long intronic noncoding RNA transcription: expression noise or expression choice? Genomics 93(4), 291\u2013298 (2009)","journal-title":"Genomics"},{"issue":"5","key":"17_CR7","doi-asserted-by":"publisher","first-page":"1154","DOI":"10.1109\/TCBB.2016.2609420","volume":"14","author":"L Yuan","year":"2017","unstructured":"Yuan, L., Zhu, L., Guo, W.L., Huang, D.S.: Nonconvex penalty based low-rank representation and sparse regression for eQTL mapping. IEEE\/ACM Trans. Comput. Biol. Bioinf. 14(5), 1154\u20131164 (2017)","journal-title":"IEEE\/ACM Trans. Comput. Biol. Bioinf."},{"issue":"11","key":"17_CR8","doi-asserted-by":"publisher","first-page":"699","DOI":"10.1038\/nrm3679","volume":"14","author":"S Geisler","year":"2013","unstructured":"Geisler, S., Coller, J.: RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts. Nat. Rev. Mol. Cell Biol. 14(11), 699\u2013712 (2013)","journal-title":"Nat. Rev. Mol. Cell Biol."},{"issue":"5","key":"17_CR9","doi-asserted-by":"publisher","first-page":"1110","DOI":"10.1016\/j.cell.2014.10.013","volume":"159","author":"Z Xing","year":"2014","unstructured":"Xing, Z., Lin, A., Li, C., et al.: lncRNA directs cooperative epigenetic regulation downstream of chemokine signals. Cell 159(5), 1110\u20131125 (2014)","journal-title":"Cell"},{"key":"17_CR10","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1155\/2017\/5024867","volume":"1","author":"L Yuan","year":"2017","unstructured":"Yuan, L., Yuan, C.A., Huang, D.S.: FAACOSE: a fast adaptive ant colony optimization algorithm for detecting SNP epistasis. Complexity 1, 1\u201310 (2017)","journal-title":"Complexity"},{"issue":"1","key":"17_CR11","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1038\/s41598-018-37186-2","volume":"9","author":"L Yuan","year":"2019","unstructured":"Yuan, L., Huang, D.S.: A network-guided association mapping approach from DNA methylation to disease. Sci. Rep. 9(1), 1\u201316 (2019)","journal-title":"Sci. Rep."},{"issue":"4","key":"17_CR12","first-page":"558","volume":"18","author":"X Chen","year":"2016","unstructured":"Chen, X., Yan, C.C., Zhang, X., et al.: Long non-coding RNAs and complex diseases: from experimental results to computational models. Brief. Bioinform. 18(4), 558\u2013576 (2016)","journal-title":"Brief. Bioinform."},{"issue":"3","key":"17_CR13","doi-asserted-by":"publisher","first-page":"841","DOI":"10.1093\/hmg\/ddu502","volume":"24","author":"Y Gao","year":"2014","unstructured":"Gao, Y., Meng, H., Liu, S., et al.: LncRNA-HOST2 regulates cell biological behaviors in epithelial ovarian cancer through a mechanism involving microRNA let-7. Hum. Mol. Genet. 24(3), 841\u2013852 (2014)","journal-title":"Hum. Mol. Genet."},{"key":"17_CR14","first-page":"1","volume":"1","author":"L Yuan","year":"2015","unstructured":"Yuan, L., Zheng, C.H., Xia, J.F., Huang, D.S.: Module based differential coexpression analysis method for type 2 diabetes. Biomed. Res. Int. 1, 1\u20138 (2015)","journal-title":"Biomed. Res. Int."},{"issue":"D1","key":"17_CR15","doi-asserted-by":"publisher","first-page":"D983","DOI":"10.1093\/nar\/gks1099","volume":"41","author":"G Chen","year":"2012","unstructured":"Chen, G., Wang, Z., Wang, D., et al.: LncRNADisease: a database for long-non-coding RNA-associated diseases. Nucleic Acids Res. 41(D1), D983\u2013D986 (2012)","journal-title":"Nucleic Acids Res."},{"issue":"3","key":"17_CR16","doi-asserted-by":"crossref","first-page":"458","DOI":"10.1093\/bioinformatics\/btw639","volume":"33","author":"W Lan","year":"2016","unstructured":"Lan, W., Li, M., Zhao, K., et al.: LDAP: a web server for lncRNA-disease association prediction. Bioinformatics 33(3), 458\u2013460 (2016)","journal-title":"Bioinformatics"},{"issue":"9","key":"17_CR17","doi-asserted-by":"publisher","first-page":"e90","DOI":"10.1093\/nar\/gkw093","volume":"44","author":"J Wang","year":"2016","unstructured":"Wang, J., Ma, R., Ma, W., et al.: LncDisease: a sequence based bioinformatics tool for predicting lncRNA-disease associations. Nucleic Acids Res. 44(9), e90\u2013e90 (2016)","journal-title":"Nucleic Acids Res."},{"issue":"3","key":"17_CR18","doi-asserted-by":"publisher","first-page":"760","DOI":"10.1039\/C4MB00511B","volume":"11","author":"M Zhou","year":"2015","unstructured":"Zhou, M., Wang, X., Li, J., et al.: Prioritizing candidate disease-related long non-coding RNAs by walking on the heterogeneous lncRNA and disease network. Mol. BioSyst. 11(3), 760\u2013769 (2015)","journal-title":"Mol. BioSyst."},{"issue":"2","key":"17_CR19","doi-asserted-by":"publisher","first-page":"396","DOI":"10.1109\/TCBB.2017.2701379","volume":"16","author":"J Zhang","year":"2017","unstructured":"Zhang, J., Zhang, Z., Chen, Z., et al.: Integrating multiple heterogeneous networks for novel lncRNA-disease association inference. IEEE\/ACM Trans. Comput. Biol. Bioinf. 16(2), 396\u2013406 (2017)","journal-title":"IEEE\/ACM Trans. Comput. Biol. Bioinf."},{"key":"17_CR20","doi-asserted-by":"publisher","first-page":"39516","DOI":"10.1038\/srep39516","volume":"7","author":"Q Yao","year":"2017","unstructured":"Yao, Q., Wu, L., Li, J., et al.: Global prioritizing disease candidate lncRNAs via a multi-level composite network. Sci. Rep. 7, 39516 (2017)","journal-title":"Sci. Rep."},{"issue":"2","key":"17_CR21","doi-asserted-by":"publisher","first-page":"175","DOI":"10.1109\/TNB.2015.2391133","volume":"14","author":"GU Ganegoda","year":"2015","unstructured":"Ganegoda, G.U., Li, M., Wang, W., et al.: Heterogeneous network model to infer human disease-long intergenic non-coding RNA associations. IEEE Trans. Nanobiosci. 14(2), 175\u2013183 (2015)","journal-title":"IEEE Trans. Nanobiosci."},{"issue":"20","key":"17_CR22","doi-asserted-by":"publisher","first-page":"2617","DOI":"10.1093\/bioinformatics\/btt426","volume":"29","author":"X Chen","year":"2013","unstructured":"Chen, X., Yan, G.Y.: Novel human lncRNA\u2013disease association inference based on lncRNA expression profiles. Bioinformatics 29(20), 2617\u20132624 (2013)","journal-title":"Bioinformatics"},{"key":"17_CR23","doi-asserted-by":"crossref","unstructured":"Zheng, C.H., Yuan, L., Sha, W., et al.: Gene differential coexpression analysis based on biweight correlation and maximum clique. BMC Bioinform. 15(S15), S3 (2014)","DOI":"10.1186\/1471-2105-15-S15-S3"},{"key":"17_CR24","series-title":"Lecture Notes in Computer Science (Lecture Notes in Artificial Intelligence)","doi-asserted-by":"publisher","first-page":"862","DOI":"10.1007\/978-3-319-42297-8_80","volume-title":"Intelligent Computing Methodologies","author":"L Yuan","year":"2016","unstructured":"Yuan, L., Han, K., Huang, D.-S.: Novel algorithm for multiple quantitative trait loci mapping by using bayesian variable selection regression. In: Huang, D.-S., Han, K., Hussain, A. (eds.) ICIC 2016. LNCS (LNAI), vol. 9773, pp. 862\u2013868. Springer, Cham (2016). https:\/\/doi.org\/10.1007\/978-3-319-42297-8_80"}],"container-title":["Lecture Notes in Computer Science","Intelligent Computing Theories and Application"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-030-60802-6_17","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,10,9]],"date-time":"2023-10-09T17:37:05Z","timestamp":1696873025000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-030-60802-6_17"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020]]},"ISBN":["9783030608019","9783030608026"],"references-count":24,"URL":"https:\/\/doi.org\/10.1007\/978-3-030-60802-6_17","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2020]]},"assertion":[{"value":"5 October 2020","order":1,"name":"first_online","label":"First Online","group":{"name":"ChapterHistory","label":"Chapter History"}},{"value":"ICIC","order":1,"name":"conference_acronym","label":"Conference Acronym","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"International Conference on Intelligent Computing","order":2,"name":"conference_name","label":"Conference Name","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Bari","order":3,"name":"conference_city","label":"Conference City","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Italy","order":4,"name":"conference_country","label":"Conference Country","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"2020","order":5,"name":"conference_year","label":"Conference Year","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"2 October 2020","order":7,"name":"conference_start_date","label":"Conference Start Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"5 October 2020","order":8,"name":"conference_end_date","label":"Conference End Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"16","order":9,"name":"conference_number","label":"Conference Number","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"icic2020","order":10,"name":"conference_id","label":"Conference ID","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"http:\/\/ic-ic.tongji.edu.cn\/2020\/index.htm","order":11,"name":"conference_url","label":"Conference URL","group":{"name":"ConferenceInfo","label":"Conference Information"}}]}}