{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,3,25]],"date-time":"2025-03-25T15:58:39Z","timestamp":1742918319574,"version":"3.40.3"},"publisher-location":"Cham","reference-count":18,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783030653507"},{"type":"electronic","value":"9783030653514"}],"license":[{"start":{"date-parts":[[2021,1,1]],"date-time":"2021-01-01T00:00:00Z","timestamp":1609459200000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"},{"start":{"date-parts":[[2021,1,1]],"date-time":"2021-01-01T00:00:00Z","timestamp":1609459200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2021]]},"DOI":"10.1007\/978-3-030-65351-4_30","type":"book-chapter","created":{"date-parts":[[2021,1,4]],"date-time":"2021-01-04T22:03:06Z","timestamp":1609797786000},"page":"372-385","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":2,"title":["A Methodology for Evaluating the Extensibility of Boolean Networks\u2019 Structure and Function"],"prefix":"10.1007","author":[{"given":"R\u00e9mi","family":"Segretain","sequence":"first","affiliation":[]},{"given":"Sergiu","family":"Ivanov","sequence":"additional","affiliation":[]},{"given":"Laurent","family":"Trilling","sequence":"additional","affiliation":[]},{"given":"Nicolas","family":"Glade","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2021,1,5]]},"reference":[{"key":"30_CR1","doi-asserted-by":"publisher","unstructured":"Pardo, J., Ivanov, S., Delaplace, F.: Sequential reprogramming of biological network fate. Lecture Notes in Computer Science, In: Proceedings of the Computational Methods in Systems Biology - 17th International Conference (2019). https:\/\/doi.org\/10.1007\/978-3-030-31304-3_2","DOI":"10.1007\/978-3-030-31304-3_2"},{"key":"30_CR2","doi-asserted-by":"publisher","first-page":"119","DOI":"10.1007\/s10441-019-09358-8","volume":"68","author":"U Christen","year":"2020","unstructured":"Christen, U., Ivanov, S., Segretain, R., Trilling, L., Glade, N.: On computing structural and behavioral complexities of threshold Boolean networks. Acta Biotheor. 68, 119\u2013138 (2020)","journal-title":"Acta Biotheor."},{"key":"30_CR3","doi-asserted-by":"crossref","unstructured":"Thomas, R.: On the relation between the logical structure of systems and their ability to generate multiple steady states or sustained oscillations. Springer Series in Synergetics, vol. 9, pp. 180\u2013193 (1980)","DOI":"10.1007\/978-3-642-81703-8_24"},{"key":"30_CR4","doi-asserted-by":"publisher","first-page":"307","DOI":"10.1006\/jtbi.1998.0701","volume":"193","author":"L Mendoza","year":"1998","unstructured":"Mendoza, L., Alvarez-Buylla, E.R.: Dynamics of the genetic regulatory network for Arabidopsis thaliana flower morphogenesis. J. Theor. Biol. 193, 307\u2013319 (1998)","journal-title":"J. Theor. Biol."},{"key":"30_CR5","doi-asserted-by":"crossref","unstructured":"Delaplace, F., Ivanov, S.: Bisimilar Booleanization of multivalued networks. Biosyst. 197 (2020)","DOI":"10.1016\/j.biosystems.2020.104205"},{"key":"30_CR6","doi-asserted-by":"crossref","first-page":"63","DOI":"10.1016\/j.amc.2011.10.006","volume":"219","author":"J-P Delahaye","year":"2012","unstructured":"Delahaye, J.-P., Zenil, H.: Numerical evaluation of the complexity of short strings: a glance into the innermost structure of algorithmic randomness. Appl. Math. Comput. 219, 63\u201377 (2012)","journal-title":"Appl. Math. Comput."},{"issue":"5","key":"30_CR7","doi-asserted-by":"publisher","first-page":"e96223","DOI":"10.1371\/journal.pone.0096223","volume":"9","author":"F Soler-Toscano","year":"2014","unstructured":"Soler-Toscano, F., Zenil, H., Delahaye, J.-P., Gauvrit, N.: Calculating Kolmogorov complexity from the output frequency distributions of small turing machines. PLoS ONE 9(5), e96223 (2014)","journal-title":"PLoS ONE"},{"key":"30_CR8","unstructured":"Segretain R.: Repository of the inference pipeline in ASP and java. https:\/\/gitlab.com\/rsegretain\/java-parallel-pipeline"},{"key":"30_CR9","doi-asserted-by":"publisher","first-page":"2554","DOI":"10.1073\/pnas.79.8.2554","volume":"79","author":"JJ Hopfield","year":"1982","unstructured":"Hopfield, J.J.: Neural networks and physical systems with emergent collective computational abilities. Proc. Natl. Acad. Sci. USA 79, 2554\u20132558 (1982)","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"30_CR10","doi-asserted-by":"publisher","first-page":"103","DOI":"10.1016\/0022-5193(73)90208-7","volume":"39","author":"L Glass","year":"1973","unstructured":"Glass, L., Kauffman, S.: The logical analysis of continuous, nonlinear biochemical control networks. J. Theor. Biol. 39, 103\u2013129 (1973)","journal-title":"J. Theor. Biol."},{"key":"30_CR11","doi-asserted-by":"crossref","unstructured":"Za\u00f1udo, J.G.T., Aldana, M., Mart\u00ednez-Mekler, G.: Boolean threshold networks: virtues and limitations for biological modeling. In: Niiranen S., Ribeiro A. (eds) Information Processing and Biological Systems. Intelligent Systems Reference Library, vol 11. Springer, Berlin, Heidelberg (2011)","DOI":"10.1007\/978-3-642-19621-8_6"},{"key":"30_CR12","doi-asserted-by":"publisher","first-page":"S85","DOI":"10.1098\/rsif.2007.1065","volume":"5","author":"S Bornhold","year":"2008","unstructured":"Bornhold, S.: Boolean network models of cellular regulation: prospects and limitations. J. R. Soc. Interface 5, S85\u2013S94 (2008)","journal-title":"J. R. Soc. Interface"},{"key":"30_CR13","first-page":"263","volume":"4","author":"V Tran","year":"2013","unstructured":"Tran, V., McCall, M.N., McMurray, H.R., Almudevar, A.: On the underlying assumptions of threshold Boolean networks as a model for genetic regulatory network behavior. Frontiers Gen. 4, 263 (2013)","journal-title":"Frontiers Gen."},{"key":"30_CR14","doi-asserted-by":"publisher","first-page":"107","DOI":"10.3233\/AIC-2011-0491","volume":"24","author":"M Gebser","year":"2011","unstructured":"Gebser, M., Kaminski, R., Kaufmann, B., Ostrowski, M., Schaub, T., Schneider, M.: Potassco: the potsdam answer set solving collection. AI Commun. 24, 107\u2013124 (2011)","journal-title":"AI Commun."},{"key":"30_CR15","doi-asserted-by":"crossref","unstructured":"Ostrowski, M., Schaub, T.: ASP modulo CSP: the clingcon system. Theory and Practice of Logic Programming (2012)","DOI":"10.1017\/S1471068412000142"},{"key":"30_CR16","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1007\/s10479-018-2757-7","volume":"275","author":"M Banbara","year":"2019","unstructured":"Banbara, M., Inoue, K., Kaufmann, B., Okimoto, T., Schaub, T., Soh, T., Tamura, N., Wanko, P.: teaspoon: solving the curriculum-based course timetabling problems with answer set programming. Ann. Oper. Res. 275, 3\u201337 (2019)","journal-title":"Ann. Oper. Res."},{"key":"30_CR17","doi-asserted-by":"publisher","unstructured":"Vuong, Q.-T., Chauvin, R., Ivanov, S., Glade, N., Trilling, L.: A logical constraint-based approach to infer and explore diversity and composition in threshold Boolean automaton networks. In: Studies in Computational Intelligence Series; Proceedings of the Complex Networks 2017 conference (2017). https:\/\/doi.org\/10.1007\/978-3-319-72150-7_46","DOI":"10.1007\/978-3-319-72150-7_46"},{"key":"30_CR18","doi-asserted-by":"publisher","unstructured":"Segretain, R., Ivanov, S., Trilling, L., Glade, N.: Implementation of a computing pipeline for evaluating the extensibility of boolean networks\u2019 structure and function. bioRxiv 2020.10.02.323949 (2020). https:\/\/doi.org\/10.1101\/2020.10.02.323949","DOI":"10.1101\/2020.10.02.323949"}],"container-title":["Studies in Computational Intelligence","Complex Networks & Their Applications IX"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-030-65351-4_30","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,4,18]],"date-time":"2021-04-18T18:43:02Z","timestamp":1618771382000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-030-65351-4_30"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021]]},"ISBN":["9783030653507","9783030653514"],"references-count":18,"URL":"https:\/\/doi.org\/10.1007\/978-3-030-65351-4_30","relation":{},"ISSN":["1860-949X","1860-9503"],"issn-type":[{"type":"print","value":"1860-949X"},{"type":"electronic","value":"1860-9503"}],"subject":[],"published":{"date-parts":[[2021]]},"assertion":[{"value":"5 January 2021","order":1,"name":"first_online","label":"First Online","group":{"name":"ChapterHistory","label":"Chapter History"}},{"value":"COMPLEX NETWORKS 2020","order":1,"name":"conference_acronym","label":"Conference Acronym","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"International Conference on Complex Networks and Their Applications","order":2,"name":"conference_name","label":"Conference Name","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Madrid","order":3,"name":"conference_city","label":"Conference City","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Spain","order":4,"name":"conference_country","label":"Conference Country","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"2020","order":5,"name":"conference_year","label":"Conference Year","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"1 December 2020","order":7,"name":"conference_start_date","label":"Conference Start Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"3 December 2020","order":8,"name":"conference_end_date","label":"Conference End Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"iwcna2020","order":10,"name":"conference_id","label":"Conference ID","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"http:\/\/www.complexnetworks.org\/","order":11,"name":"conference_url","label":"Conference URL","group":{"name":"ConferenceInfo","label":"Conference Information"}}]}}