{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,3,27]],"date-time":"2025-03-27T09:06:30Z","timestamp":1743066390097,"version":"3.40.3"},"publisher-location":"Cham","reference-count":13,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783030816971"},{"type":"electronic","value":"9783030816988"}],"license":[{"start":{"date-parts":[[2021,1,1]],"date-time":"2021-01-01T00:00:00Z","timestamp":1609459200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springer.com\/tdm"},{"start":{"date-parts":[[2021,1,1]],"date-time":"2021-01-01T00:00:00Z","timestamp":1609459200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2021]]},"DOI":"10.1007\/978-3-030-81698-8_3","type":"book-chapter","created":{"date-parts":[[2021,7,19]],"date-time":"2021-07-19T16:03:19Z","timestamp":1626710599000},"page":"34-47","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Computation of the Observed Spectral Sequence Spectrum for Nucleotide Sequence Alignments"],"prefix":"10.1007","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-5795-8752","authenticated-orcid":false,"given":"Ernesto \u00c1lvarez","family":"Gonz\u00e1lez","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6994-3993","authenticated-orcid":false,"given":"Ricardo","family":"Balam-Narv\u00e1ez","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2021,7,20]]},"reference":[{"key":"3_CR1","doi-asserted-by":"publisher","unstructured":"Chor, B., Hendy, M.D., Snir, S.: Maximum likelihood jukes-cantor triplets: analytic solutions. Mol. Biol. Evol. 23(3), 626\u2013632 (2006). https:\/\/doi.org\/10.1093\/molbev\/msj069","DOI":"10.1093\/molbev\/msj069"},{"key":"3_CR2","unstructured":"McBee, C.D., Penttila, T.: Remarks on Hadamard conjugation and combinatorial phylogenetics. Australas. J. Comb. 66(2), 177\u2013191 (2016)"},{"key":"3_CR3","doi-asserted-by":"publisher","unstructured":"\u00c1lvarez, E.: Spectral Sequence Spectrum for an m nucleotide sequence alignment with or without GAPS (2021). https:\/\/doi.org\/10.5281\/zenodo.4587007","DOI":"10.5281\/zenodo.4587007"},{"key":"3_CR4","doi-asserted-by":"publisher","unstructured":"Carnevali, G., Cetzal-Ix, W., Balam, R.N., Leopardi, C., Romero-Gonz\u00e1lez, G.A.: A combined evidence phylogenetic re-circumscription and a taxonomic revision of lophiarella (Orchidaceae: Oncidiinae). Syst. Botany 38(1), 46\u201363 (2013). https:\/\/doi.org\/10.1600\/036364413X661926","DOI":"10.1600\/036364413X661926"},{"key":"3_CR5","unstructured":"Nixon, K.C., WinClada ver. 1.00. 08. Published by the author, Ithaca, NY (2002). http:\/\/www.cladistics.com\/ aboutWinc.htm"},{"key":"3_CR6","unstructured":"Casanellas, M.: El modelo evolutivo de Kimura: un enlace entre el \u00e1lgebra, la estad\u00edstica y la biolog\u00eda. La Gaceta de la RSME. 2, 241\u2013257 (2018)"},{"key":"3_CR7","doi-asserted-by":"publisher","unstructured":"Holder, M., Lewis, P.O.: Phylogeny estimation: traditional and Bayesian approaches. Nat. Rev. 4, 275\u2013284 (2003). https:\/\/doi.org\/10.1038\/nrg1044","DOI":"10.1038\/nrg1044"},{"key":"3_CR8","doi-asserted-by":"publisher","unstructured":"Simmons, M.P., Ochoterena, H.: Gaps as characters in sequence-based phylogenetic analyses. Syst. Biol. 49, 369\u2013381 (2000). https:\/\/doi.org\/10.1093\/sysbio\/49.2.369","DOI":"10.1093\/sysbio\/49.2.369"},{"key":"3_CR9","doi-asserted-by":"publisher","unstructured":"Hendy, M.D., Charleston, M.A.: Hadamard conjugation: a versatile tool for modelling nucleotide sequence evolution. New Zealand J. Botany. 31, 231\u2013237 (1993). https:\/\/doi.org\/10.1080\/0028825X.1993.10419500","DOI":"10.1080\/0028825X.1993.10419500"},{"key":"3_CR10","doi-asserted-by":"crossref","unstructured":"Hendy, M.D., Penny, D., Steel, M.A.: A discrete Fourier analysis for evolutionary trees. Proc. Natl. Acad. Sci. USA 91, 3339\u20133343 (1994). https:\/\/doi.org\/10.1073%2Fpnas.91.8.3339","DOI":"10.1073\/pnas.91.8.3339"},{"key":"3_CR11","doi-asserted-by":"publisher","unstructured":"Hendy, M.D., Snir, S.: Hadamard conjugation for the kimura 3ST model: combinatorial proof using path sets. IEEE\/ACM Trans. Comput. Biol. Bioinf. 5(3), 461\u2013471 (2008). https:\/\/doi.org\/10.1109\/TCBB.2007.70227","DOI":"10.1109\/TCBB.2007.70227"},{"key":"3_CR12","doi-asserted-by":"publisher","unstructured":"Steel, M.A., Hendy, M.D., Sz\u00e9kely, L.A., Erd\u00f6s, P.L.: Spectral analysis and a closest tree method for genetic sequences. Appl. Math. Lett. 5(6), 63\u201367 (1992). https:\/\/doi.org\/10.1016\/0893-9659(92)90016-3","DOI":"10.1016\/0893-9659(92)90016-3"},{"key":"3_CR13","doi-asserted-by":"publisher","unstructured":"Kimura, M.: Estimation of evolutionary sequences between homologous nucleotide sequences. Proc. Nat. Acad. Sci., USA 78, 454\u2013458 (1981). https:\/\/doi.org\/10.1073\/pnas.78.1.454","DOI":"10.1073\/pnas.78.1.454"}],"container-title":["Communications in Computer and Information Science","Maple in Mathematics Education and Research"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-030-81698-8_3","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,7,19]],"date-time":"2021-07-19T16:03:34Z","timestamp":1626710614000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/978-3-030-81698-8_3"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021]]},"ISBN":["9783030816971","9783030816988"],"references-count":13,"URL":"https:\/\/doi.org\/10.1007\/978-3-030-81698-8_3","relation":{},"ISSN":["1865-0929","1865-0937"],"issn-type":[{"type":"print","value":"1865-0929"},{"type":"electronic","value":"1865-0937"}],"subject":[],"published":{"date-parts":[[2021]]},"assertion":[{"value":"20 July 2021","order":1,"name":"first_online","label":"First Online","group":{"name":"ChapterHistory","label":"Chapter History"}},{"value":"MC","order":1,"name":"conference_acronym","label":"Conference Acronym","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Maple Conference","order":2,"name":"conference_name","label":"Conference Name","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Waterloo, ON","order":3,"name":"conference_city","label":"Conference City","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Canada","order":4,"name":"conference_country","label":"Conference Country","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"2020","order":5,"name":"conference_year","label":"Conference Year","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"2 November 2020","order":7,"name":"conference_start_date","label":"Conference Start Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"6 November 2020","order":8,"name":"conference_end_date","label":"Conference End Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"4","order":9,"name":"conference_number","label":"Conference Number","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"mc2020","order":10,"name":"conference_id","label":"Conference ID","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"https:\/\/www.maplesoft.com\/mapleconference","order":11,"name":"conference_url","label":"Conference URL","group":{"name":"ConferenceInfo","label":"Conference Information"}}]}}