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Here, we present an automatic denoising procedure for gray matter regions that allows to apply the ICA also to microscopic images, with reasonable computational effort. Apart from an automatic segmentation of gray matter regions, we applied the denoising procedure to several 3D-PLI images from a rat and a vervet monkey brain section.<\/jats:p>","DOI":"10.1007\/978-3-030-82427-3_7","type":"book-chapter","created":{"date-parts":[[2021,7,20]],"date-time":"2021-07-20T07:03:33Z","timestamp":1626764613000},"page":"90-102","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["Independent Component Analysis for Noise and Artifact Removal in Three-Dimensional Polarized Light Imaging"],"prefix":"10.1007","author":[{"given":"Kai","family":"Benning","sequence":"first","affiliation":[]},{"given":"Miriam","family":"Menzel","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1219-0310","authenticated-orcid":false,"given":"Jan Andr\u00e9","family":"Reuter","sequence":"additional","affiliation":[]},{"given":"Markus","family":"Axer","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2021,7,21]]},"reference":[{"issue":"2","key":"7_CR1","doi-asserted-by":"publisher","first-page":"1091","DOI":"10.1016\/j.neuroimage.2010.08.075","volume":"54","author":"M Axer","year":"2011","unstructured":"Axer, M., et al.: A novel approach to the human connectome: ultra-high resolution mapping of fiber tracts in the brain. 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