{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,10]],"date-time":"2025-10-10T12:19:10Z","timestamp":1760098750481,"version":"3.40.3"},"publisher-location":"Cham","reference-count":16,"publisher":"Springer Nature Switzerland","isbn-type":[{"type":"print","value":"9783031451690"},{"type":"electronic","value":"9783031451706"}],"license":[{"start":{"date-parts":[[2023,1,1]],"date-time":"2023-01-01T00:00:00Z","timestamp":1672531200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2023,1,1]],"date-time":"2023-01-01T00:00:00Z","timestamp":1672531200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2023]]},"DOI":"10.1007\/978-3-031-45170-6_89","type":"book-chapter","created":{"date-parts":[[2023,11,14]],"date-time":"2023-11-14T13:03:02Z","timestamp":1699966982000},"page":"853-861","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":2,"title":["Identification of\u00a0Potential Prognostic Biomarkers for\u00a0ESCC Using Single-Cell RNA Sequencing Data Analysis"],"prefix":"10.1007","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6620-4231","authenticated-orcid":false,"given":"Pallabi","family":"Patowary","sequence":"first","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9506-7640","authenticated-orcid":false,"given":"Dhruba K.","family":"Bhattacharyya","sequence":"additional","affiliation":[]},{"given":"Pankaj","family":"Barah","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2023,12,4]]},"reference":[{"key":"89_CR1","doi-asserted-by":"publisher","first-page":"157","DOI":"10.3389\/fonc.2018.00157","volume":"8","author":"J Abdo","year":"2018","unstructured":"Abdo, J., et al.: Discovery of novel and clinically relevant markers in formalin-fixed paraffin-embedded esophageal cancer specimen. Front. Oncol. 8, 157 (2018)","journal-title":"Front. Oncol."},{"issue":"8","key":"89_CR2","doi-asserted-by":"publisher","first-page":"353","DOI":"10.3390\/bioengineering9080353","volume":"9","author":"YA Algabri","year":"2022","unstructured":"Algabri, Y.A., Li, L., Liu, Z.P.: scGENA: a single-cell gene coexpression network analysis framework for clustering cell types and revealing biological mechanisms. Bioengineering 9(8), 353 (2022)","journal-title":"Bioengineering"},{"issue":"4","key":"89_CR3","first-page":"1","volume":"8","author":"CH Chin","year":"2014","unstructured":"Chin, C.H., Chen, S.H., Wu, H.H., Ho, C.W., Ko, M.T., Lin, C.Y.: cytoHubba: identifying hub objects and sub-networks from complex interactome. BMC Syst. Biol. 8(4), 1\u20137 (2014)","journal-title":"BMC Syst. Biol."},{"key":"89_CR4","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2021.648898","volume":"12","author":"L Cui","year":"2021","unstructured":"Cui, L., Wang, B., Ren, C., Wang, A., An, H., Liang, W.: A novel method to identify the differences between two single cell groups at single gene, gene pair, and gene module levels. Front. Genet. 12, 648898 (2021)","journal-title":"Front. Genet."},{"issue":"1","key":"89_CR5","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/s13059-015-0844-5","volume":"16","author":"G Finak","year":"2015","unstructured":"Finak, G., et al.: MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data. Genome Biol. 16(1), 1\u201313 (2015)","journal-title":"Genome Biol."},{"issue":"7","key":"89_CR6","doi-asserted-by":"publisher","first-page":"539","DOI":"10.1038\/s41592-018-0033-z","volume":"15","author":"M Huang","year":"2018","unstructured":"Huang, M., et al.: SAVER: gene expression recovery for single-cell RNA sequencing. Nat. Methods 15(7), 539\u2013542 (2018)","journal-title":"Nat. Methods"},{"key":"89_CR7","doi-asserted-by":"crossref","unstructured":"Kim, S., et al.: ATAD5 restricts R-loop formation through PCNA unloading and RNA helicase maintenance at the replication fork. Nucleic Acids Res. 48(13), 7218\u20137238 (2020)","DOI":"10.1093\/nar\/gkaa501"},{"issue":"33","key":"89_CR8","doi-asserted-by":"publisher","first-page":"3796","DOI":"10.1038\/onc.2011.535","volume":"31","author":"A Neeb","year":"2012","unstructured":"Neeb, A., et al.: The immediate early gene Ier2 promotes tumor cell motility and metastasis, and predicts poor survival of colorectal cancer patients. Oncogene 31(33), 3796\u20133806 (2012)","journal-title":"Oncogene"},{"issue":"6","key":"89_CR9","doi-asserted-by":"publisher","first-page":"2255","DOI":"10.3892\/ijo.2016.3745","volume":"49","author":"Y Osako","year":"2016","unstructured":"Osako, Y., et al.: Regulation of MMP13 by antitumor microRNA-375 markedly inhibits cancer cell migration and invasion in esophageal squamous cell carcinoma. Int. J. Oncol. 49(6), 2255\u20132264 (2016)","journal-title":"Int. J. Oncol."},{"key":"89_CR10","doi-asserted-by":"crossref","unstructured":"Patowary, P., Bhattacharyya, D.K., Barah, P.: SNMRS: an advanced measure for co-expression network analysis. Comput. Biol. Med. 105222 (2022)","DOI":"10.1016\/j.compbiomed.2022.105222"},{"key":"89_CR11","doi-asserted-by":"publisher","first-page":"32","DOI":"10.3389\/fgene.2022.828479","volume":"13","author":"S Seth","year":"2022","unstructured":"Seth, S., Mallik, S., Bhadra, T., Zhao, Z.: Dimensionality reduction and louvain agglomerative hierarchical clustering for cluster-specified frequent biomarker discovery in single-cell sequencing data. Front. Genet. 13, 32 (2022)","journal-title":"Front. Genet."},{"issue":"1","key":"89_CR12","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1038\/srep29647","volume":"6","author":"AK Talukder","year":"2016","unstructured":"Talukder, A.K., Agarwal, M., Buetow, K.H., Den\u00e8fle, P.P.: Tracking cancer genetic evolution using oncotrack. Sci. Rep. 6(1), 1\u201315 (2016)","journal-title":"Sci. Rep."},{"key":"89_CR13","doi-asserted-by":"crossref","unstructured":"Wang, Y., Zhao, M., Zhang, Y.: Integrated analysis of single-cell RNA-seq and bulk RNA-seq in the identification of a novel ceRNA network and key biomarkers in diabetic kidney disease. Int. J. Gener. Med. 1985\u20132001 (2022)","DOI":"10.2147\/IJGM.S351971"},{"issue":"1\u20132","key":"89_CR14","first-page":"28","volume":"34","author":"BL Welch","year":"1947","unstructured":"Welch, B.L.: The generalization of \u2018STUDENT\u2019S\u2019 problem when several different population varlances are involved. Biometrika 34(1\u20132), 28\u201335 (1947)","journal-title":"Biometrika"},{"key":"89_CR15","doi-asserted-by":"crossref","unstructured":"Wilcoxon, F.: Individual comparisons by ranking methods. Biom. Bull. 1, 80\u201383 (1945)","DOI":"10.2307\/3001968"},{"issue":"2","key":"89_CR16","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0207341","volume":"14","author":"X Zhu","year":"2019","unstructured":"Zhu, X., et al.: CENPE expression is associated with its DNA methylation status in esophageal adenocarcinoma and independently predicts unfavorable overall survival. PLoS ONE 14(2), e0207341 (2019)","journal-title":"PLoS ONE"}],"container-title":["Lecture Notes in Computer Science","Pattern Recognition and Machine Intelligence"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-031-45170-6_89","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,11,14]],"date-time":"2023-11-14T13:11:47Z","timestamp":1699967507000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/978-3-031-45170-6_89"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023]]},"ISBN":["9783031451690","9783031451706"],"references-count":16,"URL":"https:\/\/doi.org\/10.1007\/978-3-031-45170-6_89","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2023]]},"assertion":[{"value":"4 December 2023","order":1,"name":"first_online","label":"First Online","group":{"name":"ChapterHistory","label":"Chapter History"}},{"value":"PReMI","order":1,"name":"conference_acronym","label":"Conference Acronym","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"International Conference on Pattern Recognition and Machine Intelligence","order":2,"name":"conference_name","label":"Conference Name","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Kolkata","order":3,"name":"conference_city","label":"Conference City","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"India","order":4,"name":"conference_country","label":"Conference Country","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"2023","order":5,"name":"conference_year","label":"Conference Year","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"12 December 2023","order":7,"name":"conference_start_date","label":"Conference Start Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"15 December 2023","order":8,"name":"conference_end_date","label":"Conference End Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"10","order":9,"name":"conference_number","label":"Conference Number","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"premi2023","order":10,"name":"conference_id","label":"Conference ID","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"https:\/\/www.isical.ac.in\/~premi23\/","order":11,"name":"conference_url","label":"Conference URL","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Double-blind","order":1,"name":"type","label":"Type","group":{"name":"ConfEventPeerReviewInformation","label":"Peer Review Information (provided by the conference organizers)"}},{"value":"EquinOCS","order":2,"name":"conference_management_system","label":"Conference Management System","group":{"name":"ConfEventPeerReviewInformation","label":"Peer Review Information (provided by the conference organizers)"}},{"value":"311","order":3,"name":"number_of_submissions_sent_for_review","label":"Number of Submissions Sent for Review","group":{"name":"ConfEventPeerReviewInformation","label":"Peer Review Information (provided by the conference organizers)"}},{"value":"91","order":4,"name":"number_of_full_papers_accepted","label":"Number of Full Papers Accepted","group":{"name":"ConfEventPeerReviewInformation","label":"Peer Review Information (provided by the conference organizers)"}},{"value":"0","order":5,"name":"number_of_short_papers_accepted","label":"Number of Short Papers Accepted","group":{"name":"ConfEventPeerReviewInformation","label":"Peer Review Information (provided by the conference organizers)"}},{"value":"29% - The value is computed by the equation \"Number of Full Papers Accepted \/ Number of Submissions Sent for Review * 100\" and then rounded to a whole number.","order":6,"name":"acceptance_rate_of_full_papers","label":"Acceptance Rate of Full Papers","group":{"name":"ConfEventPeerReviewInformation","label":"Peer Review Information (provided by the conference organizers)"}},{"value":"3","order":7,"name":"average_number_of_reviews_per_paper","label":"Average Number of Reviews per Paper","group":{"name":"ConfEventPeerReviewInformation","label":"Peer Review Information (provided by the conference organizers)"}},{"value":"3","order":8,"name":"average_number_of_papers_per_reviewer","label":"Average Number of Papers per Reviewer","group":{"name":"ConfEventPeerReviewInformation","label":"Peer Review Information (provided by the conference organizers)"}},{"value":"Yes","order":9,"name":"external_reviewers_involved","label":"External Reviewers Involved","group":{"name":"ConfEventPeerReviewInformation","label":"Peer Review Information (provided by the conference organizers)"}}]}}