{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,5,15]],"date-time":"2025-05-15T04:09:36Z","timestamp":1747282176687,"version":"3.40.5"},"publisher-location":"Cham","reference-count":21,"publisher":"Springer Nature Switzerland","isbn-type":[{"value":"9783031897030","type":"print"},{"value":"9783031897047","type":"electronic"}],"license":[{"start":{"date-parts":[[2025,1,1]],"date-time":"2025-01-01T00:00:00Z","timestamp":1735689600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2025,1,1]],"date-time":"2025-01-01T00:00:00Z","timestamp":1735689600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2025]]},"DOI":"10.1007\/978-3-031-89704-7_18","type":"book-chapter","created":{"date-parts":[[2025,5,14]],"date-time":"2025-05-14T11:27:56Z","timestamp":1747222076000},"page":"233-247","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Forward and\u00a0Backward Feature Selection Guided by\u00a0Prior Biological Knowledge for\u00a0Enhanced Interpretability"],"prefix":"10.1007","author":[{"ORCID":"https:\/\/orcid.org\/0009-0004-2437-4848","authenticated-orcid":false,"given":"Sofia","family":"Mongardi","sequence":"first","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5628-9101","authenticated-orcid":false,"given":"Silvia","family":"Cascianelli","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2574-1174","authenticated-orcid":false,"given":"Marco","family":"Masseroli","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2025,5,15]]},"reference":[{"issue":"1","key":"18_CR1","doi-asserted-by":"publisher","first-page":"513","DOI":"10.1186\/s12859-017-1933-0","volume":"18","author":"S Acharya","year":"2017","unstructured":"Acharya, S., Saha, S., Nikhil, N.: Unsupervised gene selection using biological knowledge: application in sample clustering. BMC Bioinform. 18(1), 513 (2017)","journal-title":"BMC Bioinform."},{"issue":"1","key":"18_CR2","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1038\/75556","volume":"25","author":"M Ashburner","year":"2000","unstructured":"Ashburner, M., Ball, C.A., Blake, J.A., et al.: Gene Ontology: tool for the unification of biology. Gene Ontol. Consortium. Nature Genetics 25(1), 25\u201329 (2000)","journal-title":"Gene Ontol. Consortium. Nature Genetics"},{"issue":"6","key":"18_CR3","doi-asserted-by":"publisher","first-page":"787","DOI":"10.1016\/j.jbi.2007.06.005","volume":"40","author":"R Bellazzi","year":"2007","unstructured":"Bellazzi, R., Zupan, B.: Methodological review: towards knowledge-based gene expression data mining. J. Biomed. Inform. 40(6), 787\u2013802 (2007)","journal-title":"J. Biomed. Inform."},{"issue":"7418","key":"18_CR4","doi-asserted-by":"publisher","first-page":"61","DOI":"10.1038\/nature11412","volume":"490","author":"C Network","year":"2012","unstructured":"Network, C., et al.: Comprehensive molecular portraits of human breast tumours. Nature 490(7418), 61\u201370 (2012)","journal-title":"Nature"},{"key":"18_CR5","volume-title":"Pattern Classification","author":"RO Duda","year":"2001","unstructured":"Duda, R.O., Hart, P.E., Stork, D.G.: Pattern Classification, 2nd edn. Wiley, New York (2001)","edition":"2"},{"key":"18_CR6","doi-asserted-by":"publisher","first-page":"739","DOI":"10.3233\/IDA-140666","volume":"18","author":"OH Fang","year":"2014","unstructured":"Fang, O.H., Mustapha, N., Sulaiman, N.: An integrative gene selection with association analysis for microarray data classification. Intell. Data Anal. 18, 739\u2013758 (2014)","journal-title":"Intell. Data Anal."},{"key":"18_CR7","doi-asserted-by":"crossref","unstructured":"Ferri, F., Pudil, P., Hatef, M., Kittler, J.: Comparative study of techniques for large-scale feature selection. In: Gelsema, E.S., Kanal, L.S. (eds.) Pattern Recognition in Practice IV, Machine Intelligence and Pattern Recognition, vol.\u00a016, pp. 403\u2013413. North-Holland (1994)","DOI":"10.1016\/B978-0-444-81892-8.50040-7"},{"issue":"D1","key":"18_CR8","first-page":"D498","volume":"48","author":"B Jassal","year":"2019","unstructured":"Jassal, B., Matthews, L., Viteri, G., et al.: The Reactome pathway knowledgebase. Nucleic Acids Res. 48(D1), D498\u2013D503 (2019)","journal-title":"Nucleic Acids Res."},{"issue":"1","key":"18_CR9","doi-asserted-by":"publisher","first-page":"27","DOI":"10.1093\/nar\/28.1.27","volume":"28","author":"M Kanehisa","year":"2000","unstructured":"Kanehisa, M., Goto, S.: KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 28(1), 27\u201330 (2000)","journal-title":"Nucleic Acids Res."},{"key":"18_CR10","doi-asserted-by":"crossref","unstructured":"Mongardi, S., Cascianelli, S., Masseroli, M.: Biologically weighted LASSO: enhancing functional interpretability in gene expression data analysis. Bioinformatics, btae605 (2024)","DOI":"10.1093\/bioinformatics\/btae605"},{"issue":"D1","key":"18_CR11","doi-asserted-by":"publisher","first-page":"D733","DOI":"10.1093\/nar\/gkv1189","volume":"44","author":"NA O\u2019Leary","year":"2016","unstructured":"O\u2019Leary, N.A., Wright, M.W., Brister, J.R., et al.: Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation. Nucleic Acids Res. 44(D1), D733\u2013D745 (2016)","journal-title":"Nucleic Acids Res."},{"issue":"1","key":"18_CR12","doi-asserted-by":"publisher","first-page":"123","DOI":"10.1186\/s12859-022-04648-4","volume":"23","author":"S Pallotta","year":"2022","unstructured":"Pallotta, S., Cascianelli, S., Masseroli, M.: RGMQL: scalable and interoperable computing of heterogeneous omics big data and metadata in R\/Bioconductor. BMC Bioinform. 23(1), 123 (2022)","journal-title":"BMC Bioinform."},{"issue":"6","key":"18_CR13","doi-asserted-by":"publisher","first-page":"1376","DOI":"10.1021\/acschembio.1c00902","volume":"17","author":"D Pally","year":"2022","unstructured":"Pally, D., et al.: Galectin-9 signaling drives breast cancer invasion through extracellular matrix. ACS Chem. Biol. 17(6), 1376\u20131386 (2022)","journal-title":"ACS Chem. Biol."},{"issue":"1","key":"18_CR14","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.jbi.2009.06.002","volume":"43","author":"G Papachristoudis","year":"2010","unstructured":"Papachristoudis, G., Diplaris, S., Mitkas, P.A.: SoFoCles: feature filtering for microarray classification based on Gene Ontology. J. Biomed. Inform. 43(1), 1\u201314 (2010)","journal-title":"J. Biomed. Inform."},{"issue":"8","key":"18_CR15","doi-asserted-by":"publisher","first-page":"1160","DOI":"10.1200\/JCO.2008.18.1370","volume":"27","author":"JS Parker","year":"2009","unstructured":"Parker, J.S., Mullins, M., Cheang, M., et al.: Supervised risk predictor of breast cancer based on intrinsic subtypes. J. Clin. Oncol. 27(8), 1160\u20131167 (2009)","journal-title":"J. Clin. Oncol."},{"issue":"5","key":"18_CR16","doi-asserted-by":"publisher","first-page":"610","DOI":"10.1016\/j.ajhg.2008.09.017","volume":"83","author":"PN Robinson","year":"2008","unstructured":"Robinson, P.N., K\u00f6hler, S., Bauer, S., et al.: The Human Phenotype Ontology: a tool for annotating and analyzing human hereditary disease. Am. J. Hum. Genetics 83(5), 610\u2013615 (2008)","journal-title":"Am. J. Hum. Genetics"},{"issue":"1","key":"18_CR17","doi-asserted-by":"publisher","first-page":"96","DOI":"10.1007\/s12282-023-01516-8","volume":"31","author":"X Shen","year":"2024","unstructured":"Shen, X., et al.: SLC38A5 promotes glutamine metabolism and inhibits cisplatin chemosensitivity in breast cancer. Breast Cancer 31(1), 96\u2013104 (2024)","journal-title":"Breast Cancer"},{"issue":"1","key":"18_CR18","doi-asserted-by":"publisher","first-page":"966","DOI":"10.1038\/s41467-024-45084-7","volume":"15","author":"R Sun","year":"2024","unstructured":"Sun, R., et al.: Neutral ceramidase regulates breast cancer progression by metabolic programming of TREM2-associated macrophages. Nat. Commun. 15(1), 966 (2024)","journal-title":"Nat. Commun."},{"key":"18_CR19","doi-asserted-by":"publisher","first-page":"1424","DOI":"10.1093\/bioinformatics\/btt160","volume":"29","author":"Z Teng","year":"2013","unstructured":"Teng, Z., Guo, M., Liu, X., et al.: Measuring gene functional similarity based on group-wise comparison of GO terms. Bioinformatics 29, 1424\u20131432 (2013)","journal-title":"Bioinformatics"},{"issue":"3","key":"18_CR20","doi-asserted-by":"publisher","first-page":"395","DOI":"10.2307\/2982890","volume":"155","author":"G Upton","year":"2018","unstructured":"Upton, G.: Fisher\u2019s Exact Test. J. R. Stat. Soc. Ser. A Stat. Soc. 155(3), 395\u2013402 (2018)","journal-title":"J. R. Stat. Soc. Ser. A Stat. Soc."},{"issue":"10","key":"18_CR21","doi-asserted-by":"publisher","first-page":"1113","DOI":"10.1038\/ng.2764","volume":"45","author":"JN Weinstein","year":"2013","unstructured":"Weinstein, J.N., Collisson, E.A., Mills, G.B., et al.: The cancer genome atlas pan-cancer analysis project. Nat. Genet. 45(10), 1113\u20131120 (2013)","journal-title":"Nat. Genet."}],"container-title":["Lecture Notes in Computer Science","Computational Intelligence Methods for Bioinformatics and Biostatistics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-031-89704-7_18","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,5,14]],"date-time":"2025-05-14T11:27:58Z","timestamp":1747222078000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/978-3-031-89704-7_18"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025]]},"ISBN":["9783031897030","9783031897047"],"references-count":21,"URL":"https:\/\/doi.org\/10.1007\/978-3-031-89704-7_18","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"value":"0302-9743","type":"print"},{"value":"1611-3349","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025]]},"assertion":[{"value":"15 May 2025","order":1,"name":"first_online","label":"First Online","group":{"name":"ChapterHistory","label":"Chapter History"}},{"value":"The authors declare to have no conflicts of interest.","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Conflict of Interests"}},{"value":"CIBB","order":1,"name":"conference_acronym","label":"Conference Acronym","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics","order":2,"name":"conference_name","label":"Conference Name","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Benevento","order":3,"name":"conference_city","label":"Conference City","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"Italy","order":4,"name":"conference_country","label":"Conference Country","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"2024","order":5,"name":"conference_year","label":"Conference Year","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"4 September 2024","order":7,"name":"conference_start_date","label":"Conference Start Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"6 September 2024","order":8,"name":"conference_end_date","label":"Conference End Date","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"19","order":9,"name":"conference_number","label":"Conference Number","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"cibb2024","order":10,"name":"conference_id","label":"Conference ID","group":{"name":"ConferenceInfo","label":"Conference Information"}},{"value":"http:\/\/cibb2024.unisannio.it","order":11,"name":"conference_url","label":"Conference URL","group":{"name":"ConferenceInfo","label":"Conference Information"}}]}}