{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,5]],"date-time":"2025-10-05T04:15:21Z","timestamp":1759637721395},"publisher-location":"Cham","reference-count":22,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783319019277"},{"type":"electronic","value":"9783319019284"}],"license":[{"start":{"date-parts":[[2013,1,1]],"date-time":"2013-01-01T00:00:00Z","timestamp":1356998400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2013]]},"DOI":"10.1007\/978-3-319-01928-4_7","type":"book-chapter","created":{"date-parts":[[2013,9,18]],"date-time":"2013-09-18T11:44:15Z","timestamp":1379504655000},"page":"90-104","source":"Crossref","is-referenced-by-count":22,"title":["Signal Transmission across Tile Assemblies: 3D Static Tiles Simulate Active Self-assembly by 2D Signal-Passing Tiles"],"prefix":"10.1007","author":[{"given":"Jacob","family":"Hendricks","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jennifer E.","family":"Padilla","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Matthew J.","family":"Patitz","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Trent A.","family":"Rogers","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"7_CR1","doi-asserted-by":"crossref","unstructured":"Abel, Z., Benbernou, N., Damian, M., Demaine, E.D., Demaine, M.L., Flatland, R., Kominers, S.D., Schweller, R.T.: Shape replication through self-assembly and rnase enzymes. In: Proceedings of the Twenty-First Annual ACM-SIAM Symposium on Discrete Algorithms, pp. 1045\u20131064 (2010)","DOI":"10.1137\/1.9781611973075.85"},{"key":"7_CR2","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"45","DOI":"10.1007\/11944836_7","volume-title":"FSTTCS 2006: Foundations of Software Technology and Theoretical Computer Science","author":"F. Becker","year":"2006","unstructured":"Becker, F., Rapaport, I., R\u00e9mila, \u00c9.: Self-assemblying classes of shapes with a minimum number of tiles, and in optimal time. In: Arun-Kumar, S., Garg, N. (eds.) FSTTCS 2006. LNCS, vol.\u00a04337, pp. 45\u201356. Springer, Heidelberg (2006)"},{"key":"7_CR3","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"235","DOI":"10.1007\/978-3-642-02927-1_21","volume-title":"Automata, Languages and Programming","author":"H. Chandran","year":"2009","unstructured":"Chandran, H., Gopalkrishnan, N., Reif, J.H.: The tile complexity of linear assemblies. In: Albers, S., Marchetti-Spaccamela, A., Matias, Y., Nikoletseas, S., Thomas, W. (eds.) ICALP 2009, Part I. LNCS, vol.\u00a05555, pp. 235\u2013253. Springer, Heidelberg (2009)"},{"key":"7_CR4","doi-asserted-by":"publisher","first-page":"1493","DOI":"10.1137\/S0097539704446037","volume":"34","author":"Q. Cheng","year":"2005","unstructured":"Cheng, Q., Aggarwal, G., Goldwasser, M.H., Kao, M.-Y., Schweller, R.T., de Espan\u00e9s, P.M.: Complexities for generalized models of self-assembly. SIAM Journal on Computing\u00a034, 1493\u20131515 (2005)","journal-title":"SIAM Journal on Computing"},{"key":"7_CR5","doi-asserted-by":"publisher","first-page":"237","DOI":"10.1039\/C2CC37227D","volume":"49","author":"C. Costa Santini","year":"2013","unstructured":"Costa Santini, C., Bath, J., Tyrrell, A.M., Turberfield, A.J.: A clocked finite state machine built from DNA. Chem. Commun.\u00a049, 237\u2013239 (2013)","journal-title":"Chem. Commun."},{"issue":"30","key":"7_CR6","doi-asserted-by":"publisher","first-page":"3866","DOI":"10.1016\/j.tcs.2011.02.023","volume":"412","author":"M. Delorme","year":"2011","unstructured":"Delorme, M., Mazoyer, J., Ollinger, N., Theyssier, G.: Bulking i: An abstract theory of bulking. Theor. Comput. Sci.\u00a0412(30), 3866\u20133880 (2011)","journal-title":"Theor. Comput. Sci."},{"issue":"30","key":"7_CR7","doi-asserted-by":"publisher","first-page":"3881","DOI":"10.1016\/j.tcs.2011.02.024","volume":"412","author":"M. Delorme","year":"2011","unstructured":"Delorme, M., Mazoyer, J., Ollinger, N., Theyssier, G.: Bulking ii: Classifications of cellular automata. Theor. Comput. Sci.\u00a0412(30), 3881\u20133905 (2011)","journal-title":"Theor. Comput. Sci."},{"issue":"3","key":"7_CR8","doi-asserted-by":"publisher","first-page":"347","DOI":"10.1007\/s11047-008-9073-0","volume":"7","author":"E.D. Demaine","year":"2008","unstructured":"Demaine, E.D., Demaine, M.L., Fekete, S.P., Ishaque, M., Rafalin, E., Schweller, R.T., Souvaine, D.L.: Staged self-assembly: nanomanufacture of arbitrary shapes with O(1) glues. Natural Computing\u00a07(3), 347\u2013370 (2008)","journal-title":"Natural Computing"},{"key":"7_CR9","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"400","DOI":"10.1007\/978-3-642-39206-1_34","volume-title":"Automata, Languages, and Programming","author":"E.D. Demaine","year":"2013","unstructured":"Demaine, E.D., Patitz, M.J., Rogers, T.A., Schweller, R.T., Summers, S.M., Woods, D.: The two-handed tile assembly model is not intrinsically universal. In: Fomin, F.V., Freivalds, R., Kwiatkowska, M., Peleg, D. (eds.) ICALP 2013, Part I. LNCS, vol.\u00a07965, pp. 400\u2013412. Springer, Heidelberg (2013)"},{"key":"7_CR10","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1007\/978-3-642-18305-8_4","volume-title":"DNA Computing and Molecular Programming","author":"D. Doty","year":"2011","unstructured":"Doty, D., Kari, L., Masson, B.: Negative interactions in irreversible self-assembly. In: Sakakibara, Y., Mi, Y. (eds.) DNA 16. LNCS, vol.\u00a06518, pp. 37\u201348. Springer, Heidelberg (2011)"},{"key":"7_CR11","doi-asserted-by":"crossref","unstructured":"Doty, D., Lutz, J.H., Patitz, M.J., Schweller, R.T., Summers, S.M., Woods, D.: The tile assembly model is intrinsically universal. In: Proceedings of the 53rd Annual IEEE Symposium on Foundations of Computer Science, FOCS 2012, pp. 302\u2013310 (2012)","DOI":"10.1109\/FOCS.2012.76"},{"key":"7_CR12","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"714","DOI":"10.1007\/978-3-642-31594-7_60","volume-title":"Automata, Languages, and Programming","author":"B. Fu","year":"2012","unstructured":"Fu, B., Patitz, M.J., Schweller, R.T., Sheline, R.: Self-assembly with geometric tiles. In: Czumaj, A., Mehlhorn, K., Pitts, A., Wattenhofer, R. (eds.) ICALP 2012, Part I. LNCS, vol.\u00a07391, pp. 714\u2013725. Springer, Heidelberg (2012)"},{"issue":"6126","key":"7_CR13","doi-asserted-by":"publisher","first-page":"1412","DOI":"10.1126\/science.1232252","volume":"339","author":"D. Han","year":"2013","unstructured":"Han, D., Pal, S., Yang, Y., Jiang, S., Nangreave, J., Liu, Y., Yan, H.: DNA gridiron nanostructures based on four-arm junctions. Science\u00a0339(6126), 1412\u20131415 (2013)","journal-title":"Science"},{"key":"7_CR14","doi-asserted-by":"crossref","unstructured":"Hendricks, J.G., Padilla, J.E., Patitz, M.J., Rogers, T.A.: Signal transmission across tile assemblies: 3D static tiles simulate active self-assembly by 2D signal-passing tiles. Technical Report 1306.5005, Computing Research Repository (2013)","DOI":"10.1007\/978-3-319-01928-4_7"},{"issue":"6111","key":"7_CR15","doi-asserted-by":"publisher","first-page":"1177","DOI":"10.1126\/science.1227268","volume":"338","author":"Y. Ke","year":"2012","unstructured":"Ke, Y., Ong, L.L., Shih, W.M., Yin, P.: Three-dimensional structures self-assembled from dna bricks. Science\u00a0338(6111), 1177\u20131183 (2012)","journal-title":"Science"},{"issue":"39","key":"7_CR16","doi-asserted-by":"publisher","first-page":"9185","DOI":"10.1002\/anie.201102342","volume":"50","author":"J.-W. Kim","year":"2011","unstructured":"Kim, J.-W., Kim, J.-H., Deaton, R.: DNA-linked nanoparticle building blocks for programmable matter. Angewandte Chemie International Edition\u00a050(39), 9185\u20139190 (2011)","journal-title":"Angewandte Chemie International Edition"},{"key":"7_CR17","unstructured":"Padilla, J.E.: Personal communication (2013)"},{"key":"7_CR18","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"174","DOI":"10.1007\/978-3-642-39074-6_17","volume-title":"Unconventional Computation and Natural Computation","author":"J.E. Padilla","year":"2013","unstructured":"Padilla, J.E., Patitz, M.J., Pena, R., Schweller, R.T., Seeman, N.C., Sheline, R., Summers, S.M., Zhong, X.: Asynchronous signal passing for tile self-assembly: Fuel efficient computation and efficient assembly of shapes. In: Mauri, G., Dennunzio, A., Manzoni, L., Porreca, A.E. (eds.) UCNC 2013. LNCS, vol.\u00a07956, pp. 174\u2013185. Springer, Heidelberg (2013)"},{"issue":"12","key":"7_CR19","doi-asserted-by":"publisher","first-page":"763","DOI":"10.1038\/nnano.2011.187","volume":"6","author":"A.V. Pinheiro","year":"2011","unstructured":"Pinheiro, A.V., Han, D., Shih, W.M., Yan, H.: Challenges and opportunities for structural dna nanotechnology. Nature Nanotechnology\u00a06(12), 763\u2013772 (2011)","journal-title":"Nature Nanotechnology"},{"key":"7_CR20","doi-asserted-by":"crossref","unstructured":"Rothemund, P.W., Papadakis, N., Winfree, E.: Algorithmic self-assembly of dna sierpinski triangles. PLoS Biology 2(12), e424 (2004)","DOI":"10.1371\/journal.pbio.0020424"},{"key":"7_CR21","unstructured":"Winfree, E.: Algorithmic Self-Assembly of DNA. PhD thesis, California Institute of Technology (June 1998)"},{"key":"7_CR22","first-page":"353","volume-title":"Proceedings of the 4th Conference on Innovations in Theoretical Computer Science, ITCS 2013","author":"D. Woods","year":"2013","unstructured":"Woods, D., Chen, H.-L., Goodfriend, S., Dabby, N., Winfree, E., Yin, P.: Active self-assembly of algorithmic shapes and patterns in polylogarithmic time. In: Proceedings of the 4th Conference on Innovations in Theoretical Computer Science, ITCS 2013, pp. 353\u2013354. ACM, New York (2013)"}],"container-title":["Lecture Notes in Computer Science","DNA Computing and Molecular Programming"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-319-01928-4_7","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,5,17]],"date-time":"2019-05-17T07:27:27Z","timestamp":1558078047000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-319-01928-4_7"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013]]},"ISBN":["9783319019277","9783319019284"],"references-count":22,"URL":"https:\/\/doi.org\/10.1007\/978-3-319-01928-4_7","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2013]]}}}