{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,3,28]],"date-time":"2025-03-28T02:07:10Z","timestamp":1743127630222,"version":"3.40.3"},"publisher-location":"Cham","reference-count":20,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783319067926"},{"type":"electronic","value":"9783319067933"}],"license":[{"start":{"date-parts":[[2014,1,1]],"date-time":"2014-01-01T00:00:00Z","timestamp":1388534400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2014]]},"DOI":"10.1007\/978-3-319-06793-3_4","type":"book-chapter","created":{"date-parts":[[2014,4,15]],"date-time":"2014-04-15T02:05:50Z","timestamp":1397527550000},"page":"61-73","source":"Crossref","is-referenced-by-count":9,"title":["Multivariate Networks in the Life Sciences"],"prefix":"10.1007","author":[{"given":"Oliver","family":"Kohlbacher","sequence":"first","affiliation":[]},{"given":"Falk","family":"Schreiber","sequence":"additional","affiliation":[]},{"given":"Matthew O.","family":"Ward","sequence":"additional","affiliation":[]}],"member":"297","reference":[{"key":"4_CR1","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"256","DOI":"10.1007\/978-3-642-11805-0_25","volume-title":"Graph Drawing","author":"M. Albrecht","year":"2010","unstructured":"Albrecht, M., Kerren, A., Klein, K., Kohlbacher, O., Mutzel, P., Paul, W., Schreiber, F., Wybrow, M.: On open problems in biological network visualization. In: Eppstein, D., Gansner, E.R. (eds.) GD 2009. LNCS, vol.\u00a05849, pp. 256\u2013267. Springer, Heidelberg (2010)"},{"issue":"1","key":"4_CR2","doi-asserted-by":"publisher","first-page":"248","DOI":"10.1093\/nar\/gkg056","volume":"31","author":"G.D. Bader","year":"2003","unstructured":"Bader, G.D., Betel, D., Hogue, C.W.: BIND: the biomolecular interaction network database. Nucleic Acids Research\u00a031(1), 248\u2013250 (2003)","journal-title":"Nucleic Acids Research"},{"issue":"2","key":"4_CR3","doi-asserted-by":"publisher","first-page":"101","DOI":"10.1038\/nrg1272","volume":"5","author":"A.L. Barabasi","year":"2004","unstructured":"Barabasi, A.L., Oltvai, Z.N.: Network biology: understanding the cell\u2019s functional organization. Nature Reviews Genetics\u00a05(2), 101\u2013113 (2004)","journal-title":"Nature Reviews Genetics"},{"issue":"1","key":"4_CR4","doi-asserted-by":"publisher","first-page":"147","DOI":"10.1186\/1471-2105-5-147","volume":"5","author":"H. Chen","year":"2004","unstructured":"Chen, H., Sharp, B.M.: Content-rich biological network constructed by mining PubMed abstracts. BMC Bioinformatics\u00a05(1), 147 (2004)","journal-title":"BMC Bioinformatics"},{"key":"4_CR5","doi-asserted-by":"crossref","unstructured":"Gehlenborg, N., O\u2019Donoghue, S.I., Baliga, N.S., Goesmann, A., Hibbs, M.A., Kitano, H., Kohlbacher, O., Neuweger, H., Schneider, R., Tenenbaum, D., Gavin, A.C.: Visualization of omics data for systems biology. Nature Methods 7, S56\u2013S68 (2010)","DOI":"10.1038\/nmeth.1436"},{"key":"4_CR6","doi-asserted-by":"publisher","first-page":"252","DOI":"10.3389\/fpls.2012.00252","volume":"3","author":"A. Junker","year":"2012","unstructured":"Junker, A., Rohn, H., Schreiber, F.: Visual analysis of transcriptome data in the context of anatomical structures and biological networks. Frontiers in Plant Science\u00a03, 252 (2012)","journal-title":"Frontiers in Plant Science"},{"key":"4_CR7","doi-asserted-by":"crossref","unstructured":"Kanehisa, M., Goto, S., Hattori, M., Aoki-Kinoshita, K.F., Itoh, M., Kawashima, S., Katayama, T., Araki, M., Hirakawa, M.: From genomics to chemical genomics: new developments in KEGG. Nucleic Acids Research 34, D354\u2013D357 (2006)","DOI":"10.1093\/nar\/gkj102"},{"key":"4_CR8","doi-asserted-by":"crossref","unstructured":"Kerren, A., Schreiber, F.: Toward the role of interaction in visual analytics. In: Rose, O., Uhrmacher, A.M. (eds.) Proceedings of the Winter Simulation Conference (WSC 2012). pp. 420:1\u2013420:13 (2012)","DOI":"10.1109\/WSC.2012.6465208"},{"key":"4_CR9","doi-asserted-by":"crossref","unstructured":"Kerren, A., Schreiber, F.: Network visualization for integrative bioinformatics. In: Approaches in Integrative Bioinformatics: Towards the Virtual Cell, pp. 173\u2013202. Springer (2014)","DOI":"10.1007\/978-3-642-41281-3_7"},{"key":"4_CR10","doi-asserted-by":"crossref","unstructured":"Kono, N., Arakawa, K., Ogawa, R., Kido, N., Oshita, K., Ikegami, K., Tamaki, S., Tomita, M.: Pathway projector: Web-based zoomable pathway browser using KEGG atlas and Google maps API. PLoS One 4(11), e7710 (2009)","DOI":"10.1371\/journal.pone.0007710"},{"key":"4_CR11","doi-asserted-by":"crossref","unstructured":"Kosch\u00fctzki, D.: Network centralities. In: Junker, B.H., Schreiber, F. (eds.) Analysis of Biological Networks. Wiley Series on Bioinformatics, Computational Techniques and Engineering, pp. 65\u201384. Wiley (2008)","DOI":"10.1002\/9780470253489.ch4"},{"key":"4_CR12","doi-asserted-by":"publisher","first-page":"735","DOI":"10.1038\/nbt.1558","volume":"27","author":"N. Le Nov\u00e8re","year":"2009","unstructured":"Le Nov\u00e8re, N., Hucka, M., Mi, H., Moodie, S., Schreiber, F., Sorokin, A., Demir, E., Wegner, K., Aladjem, M., Wimalaratne, S.M., Bergman, F.T., Gauges, R., Ghazal, P., Kawaji, H., Li, L., Matsuoka, Y., Vill\u00e9ger, A., Boyd, S.E., Calzone, L., Courtot, M., Dogrusoz, U., Freeman, T., Funahashi, A., Ghosh, S., Jouraku, A., Kim, S., Kolpakov, F., Luna, A., Sahle, S., Schmidt, E., Watterson, S., Wu, G., Goryanin, I., Kell, D.B., Sander, C., Sauro, H., Snoep, J.L., Kohn, K., Kitano, H.: The systems biology graphical notation. Nature Biotechnology\u00a027, 735\u2013741 (2009)","journal-title":"Nature Biotechnology"},{"key":"4_CR13","doi-asserted-by":"crossref","unstructured":"Matthews, L., Gopinath, G., Gillespie, M., Caudy, M., Croft, D., de\u00a0Bono, B., Garapati, P., Hemish, J., Hermjakob, H., Jassal, B., Kanapin, A., Lewis, S., Mahajan, S., May, B., Schmidt, E., Vastrik, I., Wu, G., Birney, E., Stein, L., D\u2019Eustachio, P.: Reactome knowledgebase of human biological pathways and processes. Nucleic Acids Research 37(1), D619\u2013D622 (2009)","DOI":"10.1093\/nar\/gkn863"},{"issue":"5594","key":"4_CR14","doi-asserted-by":"publisher","first-page":"824","DOI":"10.1126\/science.298.5594.824","volume":"298","author":"R. Milo","year":"2002","unstructured":"Milo, R., Shen-Orr, S., Itzkovitz, S., Kashtan, N., Chklovskii, D., Alon, U.: Network motifs: Simple building blocks of complex networks. Science\u00a0298(5594), 824\u2013827 (2002)","journal-title":"Science"},{"key":"4_CR15","doi-asserted-by":"crossref","unstructured":"Rohn, H., Hartmann, A., Junker, A., Junker, B.H., Schreiber, F.: FluxMap: a Vanted add-on for the visual exploration of flux distributions in biological networks. BMC Systems Biology 6, 33 (2012)","DOI":"10.1186\/1752-0509-6-33"},{"key":"4_CR16","doi-asserted-by":"crossref","unstructured":"Rohn, H., Junker, A., Hartmann, A., Grafahrend-Belau, E., Treutler, H., Klapperstck, M., Czauderna, T., Klukas, C., Schreiber, F.: VANTED v2: a framework for systems biology applications. BMC Systems Biology 6(139) (2012)","DOI":"10.1186\/1752-0509-6-139"},{"issue":"13","key":"4_CR17","doi-asserted-by":"publisher","first-page":"1839","DOI":"10.1093\/bioinformatics\/btr282","volume":"27","author":"H. Rohn","year":"2011","unstructured":"Rohn, H., Klukas, C., Schreiber, F.: Creating views on integrated multidomain data. Bioinformatics\u00a027(13), 1839\u20131845 (2011)","journal-title":"Bioinformatics"},{"issue":"1","key":"4_CR18","doi-asserted-by":"publisher","first-page":"449","DOI":"10.1093\/nar\/gkh086","volume":"32","author":"L. Salwinski","year":"2004","unstructured":"Salwinski, L., Miller, C.S., Smith, A.J., Pettit, F.K., Bowie, J.U., Eisenberg, D.: The database of interacting proteins: 2004 update. Nucleic Acids Research\u00a032(1), 449\u2013451 (2004)","journal-title":"Nucleic Acids Research"},{"issue":"43","key":"4_CR19","doi-asserted-by":"publisher","first-page":"15545","DOI":"10.1073\/pnas.0506580102","volume":"102","author":"A. Subramanian","year":"2005","unstructured":"Subramanian, A., Tamayo, P., Mootha, V.K., Mukherjee, S., Ebert, B.L., Gillette, M.A., Paulovich, A., Pomeroy, S.L., Golub, T.R., Lander, E.S., Mesirov, J.P.: Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles. Proceedings of the National Academy of Sciences of the United States of America\u00a0102(43), 15545\u201315550 (2005)","journal-title":"Proceedings of the National Academy of Sciences of the United States of America"},{"issue":"4","key":"4_CR20","doi-asserted-by":"publisher","first-page":"617","DOI":"10.1534\/g3.112.004929","volume":"3","author":"M.J. Truco","year":"2013","unstructured":"Truco, M.J., Ashrafi, H., Kozik, A., van Leeuwen, H., Bowers, J., Wo, S.R.C., Stoffel, K., Xu, H., Hill, T., Van Deynze, A., et al.: An ultra-high-density, transcript-based, genetic map of lettuce. G3: Genes| Genomes| Genetics\u00a03(4), 617\u2013631 (2013)","journal-title":"G3: Genes| Genomes| Genetics"}],"container-title":["Lecture Notes in Computer Science","Multivariate Network Visualization"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-319-06793-3_4","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,5,26]],"date-time":"2019-05-26T11:28:29Z","timestamp":1558870109000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-319-06793-3_4"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2014]]},"ISBN":["9783319067926","9783319067933"],"references-count":20,"URL":"https:\/\/doi.org\/10.1007\/978-3-319-06793-3_4","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2014]]}}}