{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,5,5]],"date-time":"2025-05-05T13:40:02Z","timestamp":1746452402489,"version":"3.40.4"},"publisher-location":"Cham","reference-count":33,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783319125701"},{"type":"electronic","value":"9783319125718"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2014]]},"DOI":"10.1007\/978-3-319-12571-8_7","type":"book-chapter","created":{"date-parts":[[2014,10,24]],"date-time":"2014-10-24T19:12:18Z","timestamp":1414177938000},"page":"72-83","source":"Crossref","is-referenced-by-count":5,"title":["ApiNATOMY: Towards Multiscale Views of Human Anatomy"],"prefix":"10.1007","author":[{"given":"Bernard","family":"de Bono","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Pierre","family":"Grenon","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michiel","family":"Helvensteijn","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Joost","family":"Kok","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Natallia","family":"Kokash","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"7_CR1","doi-asserted-by":"publisher","first-page":"313","DOI":"10.1186\/1756-0500-4-313","volume":"4","author":"B. Bono de","year":"2011","unstructured":"de Bono, B., Hoehndorf, R., Wimalaratne, S., Gkoutos, G., Grenon, P.: The RICORDO approach to semantic interoperability for biomedical data and models: strategy, standards and solutions. BMC Research Notes\u00a04, 313 (2011)","journal-title":"BMC Research Notes"},{"key":"7_CR2","doi-asserted-by":"crossref","unstructured":"Katifori, A., Halatsis, C., Lepouras, G., Vassilakis, C., Giannopoulou, E.: Ontology visualization methods - a survey. ACM Comput. Surv.\u00a039(4) (2007)","DOI":"10.1145\/1287620.1287621"},{"key":"7_CR3","doi-asserted-by":"crossref","unstructured":"Blake, J.A., et al.: Gene ontology annotations and resources. Nucleic Acids Res.\u00a0535, D530\u2013D535 (2013)","DOI":"10.1093\/nar\/gks1050"},{"key":"7_CR4","doi-asserted-by":"crossref","unstructured":"Hastings, J., de Matos, P., Dekker, A., Ennis, M., Harsha, B., Kale, N., Muthukrishnan, V., Owen, G., Turner, S., Williams, M., Steinbeck, C.: The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013. Nucleic Acids Res.\u00a041(D1), D456\u2013D463 (2013)","DOI":"10.1093\/nar\/gks1146"},{"key":"7_CR5","doi-asserted-by":"crossref","unstructured":"Bard, J., Rhee, S.Y., Ashburner, M.: An ontology for cell types. Genome Biol.\u00a06(2), R21 (2005)","DOI":"10.1186\/gb-2005-6-2-r21"},{"issue":"6","key":"7_CR6","doi-asserted-by":"publisher","first-page":"478","DOI":"10.1016\/j.jbi.2003.11.007","volume":"36","author":"C. Rosse","year":"2003","unstructured":"Rosse, C., Mejino Jr., J.L.V.: A reference ontology for biomedical informatics: the foundational model of anatomy. J. Biomed. Inform.\u00a036(6), 478\u2013500 (2003)","journal-title":"J. Biomed. Inform."},{"key":"7_CR7","unstructured":"EBI: Arrayexpress home, EBI (2012), http:\/\/www.ebi.ac.uk\/arrayexpress\/"},{"key":"7_CR8","doi-asserted-by":"crossref","unstructured":"Harnisch, L., Matthews, I., Chard, J., Karlsson, M.O.: Drug and disease model resources: a consortium to create standards and tools to enhance model-based drug development. CPT Pharmacomet. Syst. Pharmacol.\u00a02, e34 (2013)","DOI":"10.1038\/psp.2013.10"},{"issue":"5","key":"7_CR9","doi-asserted-by":"publisher","first-page":"837","DOI":"10.1002\/humu.22065","volume":"33","author":"B. Bono de","year":"2012","unstructured":"de Bono, B., Grenon, P., Sammut, S.: ApiNATOMY: A novel toolkit for visualizing multiscale anatomy schematics with phenotype-related information. Hum. Mutat.\u00a033(5), 837\u2013848 (2012)","journal-title":"Hum. Mutat."},{"key":"7_CR10","unstructured":"Kokash, N., de Bono, B.J.K.: Template-based treemaps to preserve spatial constraints. In: Proc. IVAPP 2014 (2014)"},{"key":"7_CR11","doi-asserted-by":"crossref","unstructured":"de Bono, B.: Achieving semantic interoperability between physiology models and clinical data. In: Proc. of IEEE Int. Conf. on e-Science Workshops, pp. 135\u2013142 (2011)","DOI":"10.1109\/eScienceW.2011.29"},{"issue":"3","key":"7_CR12","doi-asserted-by":"publisher","first-page":"149","DOI":"10.1007\/s12021-008-9024-z","volume":"6","author":"D. Gardner","year":"2008","unstructured":"Gardner, D., et al.: The neuroscience information framework: A data and knowledge environment for neuroscience. Neuroinformatics\u00a06(3), 149\u2013160 (2008)","journal-title":"Neuroinformatics"},{"key":"7_CR13","doi-asserted-by":"crossref","unstructured":"Mitsuhashi, N., Fujieda, K., Tamura, T., Kawamoto, S., Takagi, T., Okubo, K.: Bodyparts3d: 3d structure database for anatomical concepts. Nucleic Acids Res.\u00a037, D782\u2013D785 (2009)","DOI":"10.1093\/nar\/gkn613"},{"issue":"4","key":"7_CR14","doi-asserted-by":"publisher","first-page":"318","DOI":"10.1038\/nrn1885","volume":"7","author":"G.A. Ascoli","year":"2006","unstructured":"Ascoli, G.A.: Mobilizing the base of neuroscience data: the case of neuronal morphologies. Nat. Rev. Neurosci.\u00a07(4), 318\u2013324 (2006)","journal-title":"Nat. Rev. Neurosci."},{"key":"7_CR15","doi-asserted-by":"crossref","unstructured":"Johnson, B., Shneiderman, B.: Tree-maps: a space-filling approach to the visualization of hierarchical information structures. In: Proc. of the 2nd Conference on Visualization 1991, pp. 284\u2013291. IEEE (1991)","DOI":"10.1109\/VISUAL.1991.175815"},{"key":"7_CR16","first-page":"1248","volume":"13","author":"R. Blanch","year":"2007","unstructured":"Blanch, R., Lecolinet, E.: Browsing zoomable treemaps: Structure-aware multi-scale navigation techniques. TVCG\u00a013, 1248\u20131253 (2007)","journal-title":"TVCG"},{"issue":"5","key":"7_CR17","doi-asserted-by":"publisher","first-page":"741","DOI":"10.1109\/TVCG.2006.147","volume":"12","author":"D. Holten","year":"2006","unstructured":"Holten, D.: Hierarchical edge bundles: Visualization of adjacency relations in hierarchical data. IEEE Transactions on Visualization and Computer Graphics\u00a012(5), 741\u2013748 (2006)","journal-title":"IEEE Transactions on Visualization and Computer Graphics"},{"key":"7_CR18","doi-asserted-by":"crossref","unstructured":"Gansner, E.R., Hu, Y., North, S.C., Scheidegger, C.E.: Multilevel agglomerative edge bundling for visualizing large graphs. In: Battista, G.D., Fekete, J.D., Qu, H. (eds.) Proce. of PacificVis, pp. 187\u2013194. IEEE Computer Society (2011)","DOI":"10.1109\/PACIFICVIS.2011.5742389"},{"key":"7_CR19","doi-asserted-by":"publisher","first-page":"865","DOI":"10.1111\/j.1467-8659.2012.03079.x","volume":"31","author":"C. Hurter","year":"2012","unstructured":"Hurter, C., Ersoy, O., Telea, A.: Graph bundling by kernel density estimation. Comp. Graph. Forum\u00a031, 865\u2013874 (2012)","journal-title":"Comp. Graph. Forum"},{"issue":"11","key":"7_CR20","doi-asserted-by":"publisher","first-page":"1129","DOI":"10.1002\/spe.4380211102","volume":"21","author":"T. Fruchterman","year":"1991","unstructured":"Fruchterman, T., Reingold, E.: Graph drawing by force-directed placement. Software Practice and Experience\u00a021(11), 1129\u20131164 (1991)","journal-title":"Software Practice and Experience"},{"key":"7_CR21","unstructured":"Bostock, M.: Sticky force layout. Online visualization tool, http:\/\/bl.ocks.org\/mbostock\/3750558 (accessed on May 20, 2014)"},{"key":"7_CR22","unstructured":"EBI: Ensemble. Online web page (2014) (accessed on May 20, 2014)"},{"key":"7_CR23","unstructured":"Weaver, C., Bruns, C., Helvensteijn, M.: SharkViewer. Howard Hughes Medical Institute, Janelia Farm Research Campus. doi:10.5281\/zenodo.10053 (2014)"},{"key":"7_CR24","doi-asserted-by":"crossref","unstructured":"Magnenat-Thalmann, N., Ratib, O., Choi, H.F. (eds.): 3D Multiscale Physiological Human. Springer (2014)","DOI":"10.1007\/978-1-4471-6275-9"},{"key":"7_CR25","series-title":"Lecture Notes in Computer Science","volume-title":"Modelling the Physiological Human","year":"2009","unstructured":"Magnenat-Thalmann, N. (ed.): 3DPH 2009. LNCS, vol.\u00a05903. Springer, Heidelberg (2009)"},{"key":"7_CR26","doi-asserted-by":"crossref","unstructured":"Burger, A., Davidson, D., Baldock, R. (eds.): Anatomy Ontologies for Bioinformatics. Computational Biology, vol.\u00a06. Springer (2008)","DOI":"10.1007\/978-1-84628-885-2"},{"key":"7_CR27","doi-asserted-by":"crossref","unstructured":"Burch, M., Diehl, S.: Trees in a treemap: Visualizing multiple hierarchies. In: Proc. VDA 2006 (2006)","DOI":"10.1117\/12.643272"},{"key":"7_CR28","unstructured":"Battista, G.D., Eades, P., Tamassia, R., Tollis, I.G.: Graph Drawing: Algorithms for the Visualization of Graphs. Prentice Hall (1999)"},{"issue":"3","key":"7_CR29","doi-asserted-by":"publisher","first-page":"983","DOI":"10.1111\/j.1467-8659.2009.01450.x","volume":"28","author":"D. Holten","year":"2009","unstructured":"Holten, D., van Wijk, J.J.: Force-directed edge bundling for graph visualization. Comput. Graph. Forum\u00a028(3), 983\u2013990 (2009)","journal-title":"Comput. Graph. Forum"},{"key":"7_CR30","doi-asserted-by":"crossref","unstructured":"Selassie, D., Heller, B., Heer, J.: Divided edge bundling for directional network data. IEEE Trans. Visualization & Comp. Graphics (Proc. InfoVis) (2011)","DOI":"10.1109\/TVCG.2011.190"},{"issue":"2010","key":"7_CR31","first-page":"2595","volume":"368","author":"P. Hunter","year":"1920","unstructured":"Hunter, P., et al.: A vision and strategy for the virtual physiological human in 2010 and beyond. Philos. Trans. A Math. Phys. Eng. Sci.\u00a0368(2010), 2595\u20132614 (1920)","journal-title":"Philos. Trans. A Math. Phys. Eng. Sci."},{"key":"7_CR32","unstructured":"Wikipedia: Zygote body (2014), http:\/\/en.wikipedia.org\/wiki\/Zygote_Body (accessed on May 20, 2014)"},{"issue":"8","key":"7_CR33","doi-asserted-by":"publisher","first-page":"958","DOI":"10.1002\/biot.201100304","volume":"7","author":"B. Bono de","year":"2012","unstructured":"de Bono, B., Hunter, P.: Integrating knowledge representation and quantitative modelling in physiology. Biotechnol. J.\u00a07(8), 958\u2013972 (2012)","journal-title":"Biotechnol. J."}],"container-title":["Lecture Notes in Computer Science","Advances in Intelligent Data Analysis XIII"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-319-12571-8_7","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,5,5]],"date-time":"2025-05-05T13:09:38Z","timestamp":1746450578000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-319-12571-8_7"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2014]]},"ISBN":["9783319125701","9783319125718"],"references-count":33,"URL":"https:\/\/doi.org\/10.1007\/978-3-319-12571-8_7","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2014]]}}}