{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T04:10:48Z","timestamp":1748751048323,"version":"3.41.0"},"publisher-location":"Cham","reference-count":41,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783319271392"},{"type":"electronic","value":"9783319271408"}],"license":[{"start":{"date-parts":[[2015,1,1]],"date-time":"2015-01-01T00:00:00Z","timestamp":1420070400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2015]]},"DOI":"10.1007\/978-3-319-27140-8_10","type":"book-chapter","created":{"date-parts":[[2015,11,16]],"date-time":"2015-11-16T13:27:57Z","timestamp":1447680477000},"page":"131-147","source":"Crossref","is-referenced-by-count":2,"title":["A Performance and Scalability Analysis of the MPI Based Tools Utilized in a Large Ice Sheet Model Executing in a Multicore Environment"],"prefix":"10.1007","author":[{"given":"Phillip","family":"Dickens","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2015,12,16]]},"reference":[{"key":"10_CR1","unstructured":"Balay, S., et al.: PETSc Users Manual. Technical report #ANL-95\/11 - Revision 3.6. Argonne National Laboratory"},{"key":"10_CR2","doi-asserted-by":"publisher","first-page":"163","DOI":"10.1007\/978-1-4612-1986-6_8","volume-title":"Modern Software Tools in Scientific Computing","author":"S Balay","year":"1997","unstructured":"Balay, S., Gropp, W.D., McInnes, L.C., Smith, B.F.: Efficient management of parallelism in object oriented numerical software libraries. In: Arge, E., Bruaset, A.M., Langtangen, H.P. (eds.) Modern Software Tools in Scientific Computing, pp. 163\u2013202. Birkh\u00e4user Press, Boston (1997)"},{"issue":"4","key":"10_CR3","doi-asserted-by":"publisher","first-page":"603","DOI":"10.1142\/S0129053389000317","volume":"1","author":"SJ Baylor","year":"1989","unstructured":"Baylor, S.J., Rathi, B.D.: An evaluation of the memory reference behavior of engineering\/scientific applications in parallel systems. Int. J. High Speed Comput. 1(4), 603\u2013641 (1989)","journal-title":"Int. J. High Speed Comput."},{"issue":"3","key":"10_CR4","doi-asserted-by":"publisher","first-page":"881","DOI":"10.5194\/tc-9-881-2015","volume":"9","author":"B Boer de","year":"2015","unstructured":"de Boer, B., Dolan, A.M., Bernales, J., Gasson, E., Goelzer, H., Golledge, N.R., Sutter, J., Huybrechts, P., Lohmann, G., Rogozhina, I., Abe-Ouchi, A., Saito, F., van de Wal, R.S.W.: Simulating the Antarctic ice sheet in the late-Pliocene warm period: PLISMIP-ANT, an ice-sheet model intercomparison project. Cryosphere. 9(3), 881\u2013903 (2015)","journal-title":"Cryosphere."},{"issue":"6","key":"10_CR5","doi-asserted-by":"publisher","first-page":"1613","DOI":"10.5194\/gmd-8-1613-2015","volume":"8","author":"E Bueler","year":"2015","unstructured":"Bueler, E., van Pelt, W.: Mass-conserving subglacial hydrology in the parallel ice sheet model version 0.6. Geosci. Mod. Dev. 8(6), 1613\u20131635 (2015)","journal-title":"Geosci. Mod. Dev."},{"key":"10_CR6","doi-asserted-by":"crossref","unstructured":"Buntinas, D., Goglin, B., Goodell, D., Mercier, G., Moreaud, S.: Cache-Efficient, Intranode, Large-Message MPI Communication with MPICH2-Nemesis, pp. 462\u2013469, September 2009","DOI":"10.1109\/ICPP.2009.22"},{"key":"10_CR7","unstructured":"CDF-5 Format Specifications. http:\/\/cucis.ece.northwestern.edu\/projects\/PnetCDF\/cdf5.html . Accessed 11 September 2013"},{"key":"10_CR8","unstructured":"Coloma, K., Choudhary, A., Liao, W.: DAChe: direct access cache system for parallel I\/O. In: Proceedings of the 2005 International Supercomputer Conference (2005)"},{"key":"10_CR9","doi-asserted-by":"crossref","unstructured":"Crandall, P., Aydt, R.A., Chien, A.A., Reed, D.A.: Input\/output characteristics of scalable parallel applications. In: Proceedings of Supercomputing 1995 (1995)","DOI":"10.1145\/224170.224396"},{"key":"10_CR10","unstructured":"Phillip, D., Timothy, M.: Increasing the scalability of PISM for high resolution ice sheet models. In: Workshop on Parallel and Distributed Scientific and Engineering Computing, Boston, May 2013"},{"key":"10_CR11","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"959","DOI":"10.1007\/BFb0057954","volume-title":"Euro-Par1998 Parallel Processing","author":"PM Dickens","year":"1998","unstructured":"Dickens, P.M., Thakur, R.: A performance study of two-phase i\/o. In: Pritchard, D., Reeve, J.S. (eds.) Euro-Par 1998. LNCS, vol. 1470, pp. 959\u2013965. Springer, Heidelberg (1998)"},{"key":"10_CR12","unstructured":"Documentation for PISM, a parallel Ice Sheet Model. http:\/\/pism-docs.org\/wiki\/doku.php . Accessed 15 May 2015"},{"issue":"2","key":"10_CR13","doi-asserted-by":"publisher","first-page":"631","DOI":"10.5194\/tc-9-631-2015","volume":"9","author":"J Feldmann","year":"2015","unstructured":"Feldmann, J., Levermann, A.: Interaction of marine ice-sheet instabilities in two drainage basins: simple scaling of geometry and transition time. Cryosphere 9(2), 631\u2013645 (2015)","journal-title":"Cryosphere"},{"key":"10_CR14","volume-title":"Mathematical Models in the Applied Sciences","author":"AC Fowler","year":"1997","unstructured":"Fowler, A.C.: Mathematical Models in the Applied Sciences. Cambridge University Press, Cambridge (1997)"},{"key":"10_CR15","doi-asserted-by":"crossref","unstructured":"Jin, H.-W., Sur, S., Chai, L., Panda, D.K.: Lightweight kernel-level primitives for high-performance MPI intra-node communication over multi-core systems, pp. 446\u2013451 (2007)","DOI":"10.1109\/CLUSTR.2007.4629263"},{"key":"10_CR16","doi-asserted-by":"crossref","unstructured":"Liao, W., Choudhary, A.: Dynamically adapting file domain partitioning methods for collective i\/o based on underlying parallel file system locking protocols. In: Proceedings of the ACM\/IEEE Conference on Supercomputing (SC 2008), pp. 313\u2013344 (2008)","DOI":"10.1109\/SC.2008.5222722"},{"key":"10_CR17","doi-asserted-by":"crossref","unstructured":"Li, J., Liao, W., Choudhary, A., Ross, R., Thakur, R., Latham, R., Siegel, A., Gallagher, B., Zingale, M.: Parallel netCDF: a high-performance scientific I\/O interface. In: Proceedings of Supercomputing (2003)","DOI":"10.1145\/1048935.1050189"},{"issue":"7","key":"10_CR18","doi-asserted-by":"publisher","first-page":"1453","DOI":"10.1002\/cpe.3125","volume":"26","author":"Q Liu","year":"2014","unstructured":"Liu, Q., et al.: Hello ADIOS: the challenges and lessons of developing leadership class I\/O frameworks: HELLO ADIOS. Concurrency Comput. Pract. Experience 26(7), 1453\u20131473 (2014)","journal-title":"Concurrency Comput. Pract. Experience"},{"issue":"(B1)","key":"10_CR19","first-page":"691","volume":"103","author":"A Ma","year":"1998","unstructured":"Ma, A., Califano, F.: The shallow ice approximation for anisotropic ice- formulation and limits. J. Geophys. Res. 103((B1)), 691\u2013705 (1998)","journal-title":"J. Geophys. Res."},{"key":"10_CR20","doi-asserted-by":"crossref","unstructured":"Ma, T., Bosilca, G., Bouteiller, A., Dongarra, J.: HierKNEM: an adaptive framework for kernel-assisted and topology-aware collective communications on many-core clusters. In: 2012 IEEE 26th International Parallel & Distributed Processing Symposium (Ipdps), pp. 970\u2013982, May 2012","DOI":"10.1109\/IPDPS.2012.91"},{"issue":"7","key":"10_CR21","doi-asserted-by":"publisher","first-page":"1000","DOI":"10.1016\/j.jpdc.2013.01.015","volume":"73","author":"T Ma","year":"2013","unstructured":"Ma, T., Bosilca, G., Bouteiller, A., Dongarra, J.J.: Kernel-assisted and topology-aware MPI collective communications on multicore\/many-core platforms. J. Parallel Distrib. Comput. 73(7), 1000\u20131010 (2013)","journal-title":"J. Parallel Distrib. Comput."},{"key":"10_CR22","doi-asserted-by":"crossref","unstructured":"Ma, T., Bosilca, G., Bouteiller, A., Goglin, B., Squyres, J.M., Dongarra, J.J.: Kernel assisted collective intra-node MPI communication among multi-core and many-core CPUs. In: 2011 International Conference on Parallel Processing (ICPP), pp. 532\u2013541 (2011)","DOI":"10.1109\/ICPP.2011.29"},{"key":"10_CR23","unstructured":"Mellanox Technologies. https:\/\/www.mellanox.com\/ . Accessed 21 July 2015"},{"key":"10_CR24","unstructured":"Message Passing Interface (MPI) Forum Home Page. http:\/\/www.mpi-forum.org\/ . Accessed 30 August 2013"},{"key":"10_CR25","doi-asserted-by":"crossref","unstructured":"Moreaud, S., Goglin, B., Namyst, R., Goodell, D.: Optimizing MPI communication within large multicore nodes with kernel assistance. In: IPDPS Workshops, pp. 1\u20137 (2010)","DOI":"10.1109\/IPDPSW.2010.5470849"},{"key":"10_CR26","unstructured":"MPI-2: Extensions to the Message-Passing Interface Message Passing Interface Forum. http:\/\/mpi-forum.org\/docs\/mpi-20-html\/mpi2-report.html . Accessed 31 August 2013"},{"issue":"10","key":"10_CR27","doi-asserted-by":"publisher","first-page":"1075","DOI":"10.1109\/71.539739","volume":"7","author":"N Nieuwejaar","year":"1996","unstructured":"Nieuwejaar, N., Kotz, D., Purakayastha, A., Ellis, C.S., Best, M.: File-access characteristics of parallel scientific workloads. IEEE Trans. Parallel Distrib. Syst. 7(10), 1075\u20131089 (1996)","journal-title":"IEEE Trans. Parallel Distrib. Syst."},{"key":"10_CR28","unstructured":"Parallel HDF5. http:\/\/www.hdfgroup.org\/HDF5\/PHDF5\/ . Accessed 31 August 2013"},{"key":"10_CR29","unstructured":"PETSc Web page (2015). http:\/\/www.mcs.anl.gov\/petsc"},{"key":"10_CR30","unstructured":"PISM, a Parallel Ice Sheet Model (2014). http:\/\/www.pism-docs.org"},{"key":"10_CR31","unstructured":"PISM, a Parallel Ice Sheet Model: User\u2019s Manual (2015). http:\/\/www.pism-docs.org\/wiki\/lib\/exe\/fetch.php?media=manual.pdf"},{"key":"10_CR32","unstructured":"SeaRISE Assessment - Interactive System for Ice sheet Simulation. http:\/\/websrv.cs.umt.edu\/isis\/index.php\/SeaRISE_Assessment . Accessed 18 May 2015"},{"key":"10_CR33","unstructured":"Texas Advanced Computing Center \u2013 Stampede. http:\/\/www.tacc.utexas.edu\/resources\/hpc\/stampede . Accessed 30 August 2013"},{"key":"10_CR34","doi-asserted-by":"crossref","unstructured":"Thakur, R., Gropp, W., Lusk, E.: On implementing mpi-io portably and with high performance. In: Proceedings of the 6th Workshop on I\/O in Parallel and Distributed Systems, pp. 23\u201332 (1999)","DOI":"10.1145\/301816.301826"},{"key":"10_CR35","doi-asserted-by":"crossref","unstructured":"Thakur, R., Lusk, E.: An abstract-device interface for implementing portable parallel-i\/o interfaces. In: Proceedings of the 6th Symposium on the Frontiers of Massively Parallel Computatio, pp. 180\u2013187 (1996)","DOI":"10.1109\/FMPC.1996.558080"},{"key":"10_CR36","doi-asserted-by":"crossref","unstructured":"Thakur, R., Lusk, E.: Data sieving and collective i\/o in ROMIO. In: Proceedings of the Seventh Symposium on the Frontiers of Massively Parallel Computation, pp. 182\u2013189 (1998)","DOI":"10.1109\/FMPC.1999.750599"},{"key":"10_CR37","unstructured":"The HDF Group - Information, Support, and Software. http:\/\/www.hdfgroup.org\/ . Accessed 11 September 2013"},{"key":"10_CR38","unstructured":"Unidata | Home. http:\/\/www.unidata.ucar.edu\/ . Accessed 11 September 2013"},{"key":"10_CR39","unstructured":"Unidata | NetCDF. http:\/\/www.unidata.ucar.edu\/software\/netcdf\/ . Accessed 11 September 2013"},{"key":"10_CR40","unstructured":"Unidata | Software. http:\/\/www.unidata.ucar.edu\/software\/ . Accessed 11 September 2013"},{"issue":"1999","key":"10_CR41","doi-asserted-by":"publisher","first-page":"15","DOI":"10.1007\/s001610050102","volume":"11","author":"M Weis","year":"1999","unstructured":"Weis, M., Greve, R., Hutter, K.: Theory of shallow ice shelves. Continuum Mech. Thermo-dyn. 11(1999), 15\u201350 (1999)","journal-title":"Continuum Mech. Thermo-dyn."}],"container-title":["Lecture Notes in Computer Science","Algorithms and Architectures for Parallel Processing"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-319-27140-8_10","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,5,31]],"date-time":"2025-05-31T12:06:12Z","timestamp":1748693172000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-319-27140-8_10"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015]]},"ISBN":["9783319271392","9783319271408"],"references-count":41,"URL":"https:\/\/doi.org\/10.1007\/978-3-319-27140-8_10","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2015]]}}}