{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,6,2]],"date-time":"2025-06-02T04:05:57Z","timestamp":1748837157615,"version":"3.41.0"},"publisher-location":"Cham","reference-count":28,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783319312033"},{"type":"electronic","value":"9783319312040"}],"license":[{"start":{"date-parts":[[2016,1,1]],"date-time":"2016-01-01T00:00:00Z","timestamp":1451606400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2016]]},"DOI":"10.1007\/978-3-319-31204-0_10","type":"book-chapter","created":{"date-parts":[[2016,3,22]],"date-time":"2016-03-22T11:24:40Z","timestamp":1458645880000},"page":"138-155","source":"Crossref","is-referenced-by-count":2,"title":["Bicliques in Graphs with Correlated Edges: From Artificial to Biological Networks"],"prefix":"10.1007","author":[{"given":"Aaron","family":"Kershenbaum","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alicia","family":"Cutillo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Christian","family":"Darabos","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Keitha","family":"Murray","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Robert","family":"Schiaffino","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jason H.","family":"Moore","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2016,3,15]]},"reference":[{"issue":"1","key":"10_CR1","doi-asserted-by":"publisher","first-page":"11","DOI":"10.1016\/j.dam.2003.09.004","volume":"145","author":"G Alexe","year":"2004","unstructured":"Alexe, G., Alexe, S., Crama, Y., Foldes, S., Hammer, P.L., Simeone, B.: Consensus algorithms for the generation of all maximal bicliques. Discrete Appl. Math. 145(1), 11\u201321 (2004). Graph Optimization $$\\{{\\rm IV}\\}$$ { IV }","journal-title":"Discrete Appl. Math."},{"issue":"5","key":"10_CR2","doi-asserted-by":"publisher","first-page":"303","DOI":"10.1097\/00008571-200405000-00005","volume":"14","author":"S Anttila","year":"2004","unstructured":"Anttila, S., Illi, A., Kampman, O., Mattila, K.M., Lehtimaki, T., Leinonen, E.: Interaction between NOTCH4 and catechol-O-methyltransferase genotypes in schizophrenia patients with poor response to typical neuroleptics. Pharmacogenetics 14(5), 303\u2013307 (2004)","journal-title":"Pharmacogenetics"},{"issue":"9277","key":"10_CR3","doi-asserted-by":"publisher","first-page":"221","DOI":"10.1016\/S0140-6736(01)05415-0","volume":"358","author":"MA Atkinson","year":"2001","unstructured":"Atkinson, M.A., Eisenbarth, G.S.: Type 1 diabetes: new perspectives on disease pathogenesis and treatment. Lancet 358(9277), 221\u2013229 (2001)","journal-title":"Lancet"},{"key":"10_CR4","unstructured":"Cheng, Y., Church, G.M.: Biclustering of expression data. In: Proceedings of the International Conference Intelligent Systems for Molecular Biology, vol. 8, pp. 93\u2013103 (2000)"},{"key":"10_CR5","doi-asserted-by":"crossref","unstructured":"Cleynen, I., Boucher, G., Jostins, L., Schumm, L.P., Zeissig, S., Ahmad, T., Andersen, V., Andrews, J.M., Annese, V., Brand, S., Brant, S.R., Cho, J.H., Daly, M.J., Dubinsky, M., Duerr, R.H., Ferguson, L.R., Franke, A., Gearry, R.B., Goyette, P., Hakonarson, H., Halfvarson, J., Hov, J.R., Huang, H., Kennedy, N.A., Kupcinskas, L., Lawrance, I.C., Lee, J.C., Satsangi, J., Schreiber, S., Th\u00e9\u00e2tre, E., van der Meulen-de Jong, A.E., Weersma, R.K., Wilson, D.C., Parkes, M., Vermeire, S., Rioux, J.D., Mansfield, J., Silverberg, M.S., Radford-Smith, G., McGovern, D.P.B., Barrett, J.C., Lees, C.W.: Inherited determinants of Crohn\u2019s disease, ulcerative colitis phenotypes: a genetic association study. Lancet (2015)","DOI":"10.1016\/S0140-6736(15)00465-1"},{"key":"10_CR6","doi-asserted-by":"crossref","unstructured":"Darabos, C., Desai, K., Cowper-Sal $$\\cdot $$ \u00b7 lari, R., Giacobini, M., Graham, B.E., Lupien, M., Moore, J.H.: Inferring human phenotype networks from genome-wide genetic associations. In: Vanneschi, L., Bush, W.S., Giacobini, M. (eds.) EvoBIO 2013. LNCS, vol. 7833, pp. 23\u201334. Springer, Heidelberg (2013)","DOI":"10.1007\/978-3-642-37189-9_3"},{"key":"10_CR7","doi-asserted-by":"crossref","unstructured":"Darabos, C., Grussing, E.D., Cricco, M.E., Clark, K.A., Moore, J.H.: A bipartite network approach to inferring interactions between environmental exposures and human diseases. In: Pacific Symposium on Biocomputing, pp. 171\u2013182 (2015)","DOI":"10.1142\/9789814644730_0018"},{"key":"10_CR8","doi-asserted-by":"crossref","unstructured":"Darabos, C., Harmon, S.H., Moore, J.H.: Using the bipartite human phenotype network to reveal pleiotropy and epistasis beyond the gene. In: Pacific Symposium on Biocomputing, pp. 188\u2013199 (2014)","DOI":"10.1142\/9789814583220_0019"},{"issue":"1","key":"10_CR9","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/1756-0381-7-1","volume":"7","author":"C Darabos","year":"2014","unstructured":"Darabos, C., White, M.J., Graham, B.E., Leung, D.N., Williams, S.M., Moore, J.H.: The multiscale backbone of the human phenotype network based on biological pathways. BioData Min. 7(1), 1 (2014)","journal-title":"BioData Min."},{"key":"10_CR10","doi-asserted-by":"publisher","first-page":"1292","DOI":"10.1176\/appi.ajp.2012.11091431","volume":"169","author":"I Dieset","year":"2012","unstructured":"Dieset, I., Djurovic, S., Tesli, M.: Up-regulation of NOTCH4 gene expression in bipolar disorder. Am. J. Psychiatry 169, 1292\u20131300 (2012)","journal-title":"Am. J. Psychiatry"},{"key":"10_CR11","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"171","DOI":"10.1007\/978-3-540-92248-3_16","volume-title":"Graph-Theoretic Concepts in Computer Science","author":"S Gaspers","year":"2008","unstructured":"Gaspers, S., Kratsch, D., Liedloff, M.: On independent sets and bicliques in graphs. In: Broersma, H., Erlebach, T., Friedetzky, T., Paulusma, D. (eds.) WG 2008. LNCS, vol. 5344, pp. 171\u2013182. Springer, Heidelberg (2008)"},{"key":"10_CR12","volume-title":"Graphs and Algorithms","author":"M Gondran","year":"1984","unstructured":"Gondran, M., Minoux, M., Vajda, S.: Graphs and Algorithms. Wiley, New York (1984)"},{"issue":"9316","key":"10_CR13","doi-asserted-by":"publisher","first-page":"1450","DOI":"10.1016\/S0140-6736(02)08464-7","volume":"359","author":"A Lernmark","year":"2002","unstructured":"Lernmark, A.: Multiple sclerosis and type 1 diabetes: an unlikely alliance. Lancet 359(9316), 1450\u20131451 (2002)","journal-title":"Lancet"},{"key":"10_CR14","series-title":"Lecture Notes in Computer Science (Lecture Notes in Artificial Intelligence)","doi-asserted-by":"publisher","first-page":"146","DOI":"10.1007\/11564126_18","volume-title":"Knowledge Discovery in Databases: PKDD 2005","author":"J Li","year":"2005","unstructured":"Li, J., Li, H., Soh, D., Wong, L.: A correspondence between maximal complete bipartite subgraphs and closed patterns. In: Jorge, A.M., Torgo, L., Brazdil, P.B., Camacho, R., Gama, J. (eds.) PKDD 2005. LNCS (LNAI), vol. 3721, pp. 146\u2013156. Springer, Heidelberg (2005)"},{"key":"10_CR15","doi-asserted-by":"crossref","unstructured":"Liu, J., Wang, W.: Op-cluster: clustering by tendency in high dimensional space. In: 2003 Third IEEE International Conference on Data Mining, ICDM 2003, pp. 187\u2013194, November 2003","DOI":"10.1109\/ICDM.2003.1250919"},{"issue":"2","key":"10_CR16","doi-asserted-by":"publisher","first-page":"354","DOI":"10.1109\/TCBB.2008.61","volume":"7","author":"X Liu","year":"2010","unstructured":"Liu, X., Li, J., Wang, L.: Modeling protein interacting groups by quasi-bicliques: complexity, algorithm, and application. IEEE\/ACM Trans. Comput. Biol. Bioinform. 7(2), 354\u2013364 (2010)","journal-title":"IEEE\/ACM Trans. Comput. Biol. Bioinform."},{"key":"10_CR17","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"260","DOI":"10.1007\/978-3-540-27810-8_23","volume-title":"Algorithm Theory - SWAT 2004","author":"K Makino","year":"2004","unstructured":"Makino, K., Uno, T.: New algorithms for enumerating all maximal cliques. In: Hagerup, T., Katajainen, J. (eds.) SWAT 2004. LNCS, vol. 3111, pp. 260\u2013272. Springer, Heidelberg (2004)"},{"issue":"2","key":"10_CR18","doi-asserted-by":"publisher","first-page":"423","DOI":"10.1109\/TCBB.2012.139","volume":"10","author":"U Maulik","year":"2013","unstructured":"Maulik, U., Mukhopadhyay, A., Bhattacharyya, M., Kaderali, L., Brors, B., Bandyopadhyay, S., Eils, R.: Mining quasi-bicliques from HIV-1-human protein interaction network: a multiobjective biclustering approach. IEEE\/ACM Trans. Comput. Biol. Bioinform. 10(2), 423\u2013435 (2013)","journal-title":"IEEE\/ACM Trans. Comput. Biol. Bioinform."},{"key":"10_CR19","doi-asserted-by":"publisher","first-page":"5","DOI":"10.1016\/j.entcs.2008.04.002","volume":"209","author":"R Milner","year":"2008","unstructured":"Milner, R.: Bigraphs and their algebra. Electron. Notes Theor. Comput. Sci. 209, 5\u201319 (2008)","journal-title":"Electron. Notes Theor. Comput. Sci."},{"key":"10_CR20","doi-asserted-by":"publisher","DOI":"10.1093\/acprof:oso\/9780199206650.001.0001","volume-title":"Networks: An Introduction","author":"M Newman","year":"2010","unstructured":"Newman, M.: Networks: An Introduction. Oxford University Press Inc., New York (2010)"},{"key":"10_CR21","doi-asserted-by":"publisher","first-page":"1","DOI":"10.3389\/fimmu.2014.00117","volume":"5","author":"R Pacheco","year":"2014","unstructured":"Pacheco, R., Contreras, F., Zouali, M.: The dopaminergic system in autoimmune diseases. Front. Immunol. 5, 1\u201317 (2014)","journal-title":"Front. Immunol."},{"issue":"1","key":"10_CR22","doi-asserted-by":"publisher","first-page":"109","DOI":"10.1007\/s004930070035","volume":"20","author":"E Prisner","year":"2000","unstructured":"Prisner, E.: Bicliques in graphs I: bounds on their number. Combinatorica 20(1), 109\u2013117 (2000)","journal-title":"Combinatorica"},{"key":"10_CR23","unstructured":"Qiu, J., Darabos, C., Moore, J.H.: Studying the genetics of complex diseases with ethnicity-specific human phenotype networks: the case of type 2 diabetes in east asian populations. In: 5th Translational Bioinformatics Conference (2014)"},{"issue":"7","key":"10_CR24","doi-asserted-by":"publisher","first-page":"1036","DOI":"10.1093\/molbev\/msg115","volume":"20","author":"MJ Sanderson","year":"2003","unstructured":"Sanderson, M.J., Driskell, A.C., Ree, R.H., Eulenstein, O., Langley, S.: Obtaining maximal concatenated phylogenetic data sets from large sequence databases. Mol. Biol. Evol. 20(7), 1036\u20131042 (2003)","journal-title":"Mol. Biol. Evol."},{"key":"10_CR25","doi-asserted-by":"crossref","unstructured":"Sim, K., Li, J., Gopalkrishnan, V., Liu, G.: Mining maximal quasi-bicliques to co-cluster stocks and financial ratios for value investment. In 2006 Sixth International Conference on Data Mining, ICDM 2006, pp. 1059\u20131063, December 2006","DOI":"10.1109\/ICDM.2006.111"},{"issue":"Suppl 1","key":"10_CR26","doi-asserted-by":"publisher","first-page":"S136","DOI":"10.1093\/bioinformatics\/18.suppl_1.S136","volume":"18","author":"A Tanay","year":"2002","unstructured":"Tanay, A., Sharan, R., Shamir, R.: Discovering statistically significant biclusters in gene expression data. Bioinformatics 18(Suppl 1), S136\u201344 (2002)","journal-title":"Bioinformatics"},{"key":"10_CR27","doi-asserted-by":"crossref","unstructured":"Wang, H., Wang, W., Yang, J., Yu, P.S.: Clustering by pattern similarity in large data sets. In: Proceedings of the ACM SIGMOD International Conference on Management of Data, SIGMOD 2002, pp. 394\u2013405. ACM, New York (2002)","DOI":"10.1145\/564691.564737"},{"key":"10_CR28","doi-asserted-by":"publisher","first-page":"110","DOI":"10.1186\/1471-2105-15-110","volume":"15","author":"Y Zhang","year":"2014","unstructured":"Zhang, Y., Phillips, C.A., Rogers, G.L., Baker, E.J., Chesler, E.J., Langston, M.A.: On finding bicliques in bipartite graphs: a novel algorithm and its application to the integration of diverse biological data types. BMC Bioinform. 15, 110 (2014)","journal-title":"BMC Bioinform."}],"container-title":["Lecture Notes in Computer Science","Applications of Evolutionary Computation"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-319-31204-0_10","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T22:16:06Z","timestamp":1748816166000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-319-31204-0_10"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016]]},"ISBN":["9783319312033","9783319312040"],"references-count":28,"URL":"https:\/\/doi.org\/10.1007\/978-3-319-31204-0_10","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2016]]}}}