{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,9]],"date-time":"2024-09-09T04:49:27Z","timestamp":1725857367283},"publisher-location":"Cham","reference-count":16,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783319410081"},{"type":"electronic","value":"9783319410098"}],"license":[{"start":{"date-parts":[[2016,1,1]],"date-time":"2016-01-01T00:00:00Z","timestamp":1451606400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2016]]},"DOI":"10.1007\/978-3-319-41009-8_22","type":"book-chapter","created":{"date-parts":[[2016,6,14]],"date-time":"2016-06-14T04:49:28Z","timestamp":1465879768000},"page":"206-214","source":"Crossref","is-referenced-by-count":1,"title":["Identifying Protein Short Linear Motifs by Position-Specific Scoring Matrix"],"prefix":"10.1007","author":[{"given":"Chun","family":"Fang","sequence":"first","affiliation":[]},{"given":"Tamotsu","family":"Noguchi","sequence":"additional","affiliation":[]},{"given":"Hayato","family":"Yamana","sequence":"additional","affiliation":[]},{"given":"Fuzhen","family":"Sun","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2016,6,15]]},"reference":[{"key":"22_CR1","unstructured":"Pallab, B., Mainak, G., Peter, T.: Intrinsically Disordered Proteins Studied by NMR Spectroscopy. Chapter 9 (2014)"},{"issue":"3","key":"22_CR2","doi-asserted-by":"crossref","first-page":"635","DOI":"10.1016\/j.jmb.2004.02.002","volume":"337","author":"JJ Ward","year":"2004","unstructured":"Ward, J.J., Sodhi, J.S., McGuffin, L.J., Buxton, B.F., Jones, D.T.: Prediction and functional analysis of native disorder in proteins from the three kingdoms of life. J. Mol. Biol. 337(3), 635\u2013645 (2004)","journal-title":"J. Mol. Biol."},{"issue":"2","key":"22_CR3","doi-asserted-by":"crossref","first-page":"161","DOI":"10.1016\/j.molcel.2014.05.032","volume":"55","author":"P Tompa","year":"2014","unstructured":"Tompa, P., Norman, E.D., Toby, J.G., Mabu, M.M.: A million peptide motifs for the molecular biologist. Mol. Cell 55(2), 161\u2013169 (2014)","journal-title":"Mol. Cell"},{"issue":"21","key":"22_CR4","doi-asserted-by":"crossref","first-page":"10628","DOI":"10.1093\/nar\/gks854","volume":"40","author":"NE Davey","year":"2012","unstructured":"Davey, N.E., Cowan, J.L., Shields, D.C.: Conservation-based discovery of functional motif fingerprints in intrinsically disordered protein regions. Nucleic Acids Res. 40(21), 10628\u201310641 (2012)","journal-title":"Nucleic Acids Res."},{"issue":"5","key":"22_CR5","doi-asserted-by":"crossref","first-page":"e1000071","DOI":"10.1371\/journal.pcbi.1000071","volume":"4","author":"CF Martin","year":"2008","unstructured":"Martin, C.F., Neil, F.W., Bostjan, K., Timothy, L.B.: Discovering sequence motifs with arbitrary insertions and deletions. PLoS Comput. Biol. 4(5), e1000071 (2008)","journal-title":"PLoS Comput. Biol."},{"issue":"Suppl 2","key":"22_CR6","first-page":"W369","volume":"34","author":"LB Timothy","year":"2006","unstructured":"Timothy, L.B., Nadya, W., Chris, M., Wilfred, W.L.: MEME: discovering and analyzing DNA and protein sequence motifs. Nucleic Acids Res. 34(Suppl 2), W369\u2013W373 (2006)","journal-title":"Nucleic Acids Res."},{"issue":"20","key":"22_CR7","doi-asserted-by":"crossref","first-page":"2745","DOI":"10.1093\/bioinformatics\/btp518","volume":"25","author":"Z Dosztanyi","year":"2009","unstructured":"Dosztanyi, Z., Mszros, S.I.: ANCHOR: web server for predicting protein binding regions in disordered proteins. Bioinformatics 25(20), 2745\u20132746 (2009)","journal-title":"Bioinformatics"},{"issue":"16","key":"22_CR8","doi-asserted-by":"crossref","first-page":"3433","DOI":"10.1093\/bioinformatics\/bti541","volume":"21","author":"Z Dosztanyi","year":"2005","unstructured":"Dosztanyi, Z., Csizmok, V., Tompa, P., Istvn, S.: IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content. Bioinformatics 21(16), 3433\u20133434 (2005)","journal-title":"Bioinformatics"},{"key":"22_CR9","doi-asserted-by":"crossref","first-page":"193","DOI":"10.1016\/j.jmb.2011.10.025","volume":"415","author":"C Mooney","year":"2012","unstructured":"Mooney, C., Pollastri, G., Shields, D.C., Haslam, N.J.: Prediction of short linear protein binding regions. J. Mol. Biol. 415, 193\u2013204 (2012)","journal-title":"J. Mol. Biol."},{"key":"22_CR10","doi-asserted-by":"crossref","first-page":"D259","DOI":"10.1093\/nar\/gkt1047","volume":"42","author":"H Dinkel","year":"2014","unstructured":"Dinkel, H., Van, R.K., Michael, S., et al.: The eukaryotic linear motif resource ELM: 10 years and counting. Nucleic Acids Res. 42, D259\u2013D266 (2014)","journal-title":"Nucleic Acids Res."},{"key":"22_CR11","doi-asserted-by":"crossref","first-page":"3389","DOI":"10.1093\/nar\/25.17.3389","volume":"25","author":"SF Altschul","year":"1997","unstructured":"Altschul, S.F., Madden, T.L., Schaffer, A.A., et al.: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389\u20133402 (1997)","journal-title":"Nucleic Acids Res."},{"key":"22_CR12","unstructured":"NR. ftp:\/\/ftp.ncbi.nih.gov\/blast\/db\/fasta\/nr.gz"},{"issue":"27","key":"22_CR13","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1145\/1961189.1961199","volume":"2","author":"CC Chang","year":"2011","unstructured":"Chang, C.C., Lin, C.J.: LIBSVM: a library for support vector machines. ACM Trans. Intell. Syst. Technol. 2(27), 1\u201327 (2011)","journal-title":"ACM Trans. Intell. Syst. Technol."},{"key":"22_CR14","unstructured":"CASP10. http:\/\/predictioncenter.org\/casp10\/doc\/presentations\/CASP10_DR_KF.pdf"},{"key":"22_CR15","unstructured":"R statistical package. http:\/\/www.r-project.org\/"},{"key":"22_CR16","doi-asserted-by":"crossref","first-page":"300","DOI":"10.1186\/1471-2105-14-300","volume":"14","author":"C Fang","year":"2013","unstructured":"Fang, C., Noguchi, T., Yamana, H.: MFSPSSMpred: identifying short disorder-to-order binding regions in disordered proteins based on contextual local evolutionary conservation. BMC Bioinform. 14, 300 (2013)","journal-title":"BMC Bioinform."}],"container-title":["Lecture Notes in Computer Science","Advances in Swarm Intelligence"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-319-41009-8_22","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2017,6,24]],"date-time":"2017-06-24T16:19:25Z","timestamp":1498321165000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-319-41009-8_22"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016]]},"ISBN":["9783319410081","9783319410098"],"references-count":16,"URL":"https:\/\/doi.org\/10.1007\/978-3-319-41009-8_22","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2016]]}}}