{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,9]],"date-time":"2024-09-09T05:54:28Z","timestamp":1725861268060},"publisher-location":"Cham","reference-count":35,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783319422909"},{"type":"electronic","value":"9783319422916"}],"license":[{"start":{"date-parts":[[2016,1,1]],"date-time":"2016-01-01T00:00:00Z","timestamp":1451606400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2016]]},"DOI":"10.1007\/978-3-319-42291-6_77","type":"book-chapter","created":{"date-parts":[[2016,7,11]],"date-time":"2016-07-11T11:10:22Z","timestamp":1468235422000},"page":"775-783","source":"Crossref","is-referenced-by-count":0,"title":["Inferring Disease-Related Domain Using Network-Based Method"],"prefix":"10.1007","author":[{"given":"Zhongwen","family":"Zhang","sequence":"first","affiliation":[]},{"given":"Peng","family":"Chen","sequence":"additional","affiliation":[]},{"given":"Jun","family":"Zhang","sequence":"additional","affiliation":[]},{"given":"Bing","family":"Wang","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2016,7,12]]},"reference":[{"key":"77_CR1","doi-asserted-by":"crossref","first-page":"11","DOI":"10.3322\/caac.21166","volume":"63","author":"R Siegel","year":"2013","unstructured":"Siegel, R., Naishadham, D., Jemal, A.: Cancer statistics, 2013. CA Cancer J. Clin. 63, 11\u201330 (2013)","journal-title":"CA Cancer J. Clin."},{"key":"77_CR2","doi-asserted-by":"crossref","first-page":"144","DOI":"10.1111\/j.1755-148X.2012.00975.x","volume":"25","author":"K Dutton-Regester","year":"2012","unstructured":"Dutton-Regester, K., Hayward, N.: Reviewing the somatic genetics of melanoma: from current to future analytical approaches. Pigment Cell Melanoma Res. 25, 144\u2013154 (2012)","journal-title":"Pigment Cell Melanoma Res."},{"issue":"10","key":"77_CR3","doi-asserted-by":"crossref","first-page":"685","DOI":"10.1038\/nrg2841","volume":"11","author":"M Meyerson","year":"2010","unstructured":"Meyerson, M., Gabriel, S., Getz, G.: Advances in understanding cancer genomes through second-generation sequencing. Nat. Rev. Genet. 11(10), 685\u2013696 (2010)","journal-title":"Nat. Rev. Genet."},{"issue":"Suppl. 3","key":"77_CR4","doi-asserted-by":"crossref","first-page":"S12","DOI":"10.1186\/bcr2431","volume":"11","author":"JS Reis-Filho","year":"2009","unstructured":"Reis-Filho, J.S.: Next-generation sequencing. Breast Cancer Res. 11(Suppl. 3), S12 (2009)","journal-title":"Breast Cancer Res."},{"issue":"7457","key":"77_CR5","doi-asserted-by":"crossref","first-page":"214","DOI":"10.1038\/nature12213","volume":"499","author":"MS Lawrence","year":"2013","unstructured":"Lawrence, M.S., Stojanov, P., Polak, P., et al.: Mutational heterogeneity in cancer and the search for new cancer-associated genes. Nature 499(7457), 214\u2013218 (2013)","journal-title":"Nature"},{"issue":"1","key":"77_CR6","doi-asserted-by":"crossref","first-page":"10","DOI":"10.1111\/exd.12054","volume":"22","author":"M Kunz","year":"2013","unstructured":"Kunz, M., Dannemann, M., Kelso, J.: High-throughput sequencing of the melanoma genome. Exp. Dermatol. 22(1), 10\u201317 (2013)","journal-title":"Exp. Dermatol."},{"issue":"7278","key":"77_CR7","doi-asserted-by":"crossref","first-page":"191","DOI":"10.1038\/nature08658","volume":"463","author":"ED Pleasance","year":"2010","unstructured":"Pleasance, E.D., Cheetham, R.K., Stephens, P.J., et al.: A comprehensive catalogue of somatic mutations from a human cancer genome. Nature 463(7278), 191\u2013196 (2010)","journal-title":"Nature"},{"issue":"5","key":"77_CR8","doi-asserted-by":"crossref","first-page":"442","DOI":"10.1038\/ng.810","volume":"43","author":"X Wei","year":"2011","unstructured":"Wei, X., Walia, V., Lin, J.C., et al.: Exome sequencing identifies GRIN2A as frequently mutated in melanoma. Nat. Genet. 43(5), 442\u2013446 (2011)","journal-title":"Nat. Genet."},{"issue":"7375","key":"77_CR9","doi-asserted-by":"crossref","first-page":"99","DOI":"10.1038\/nature10630","volume":"480","author":"S Yokoyama","year":"2011","unstructured":"Yokoyama, S., Woods, S.L., Boyle, G.M., et al.: A novel recurrent mutation in MITF predisposes to familial and sporadic melanoma. Nature 480(7375), 99\u2013103 (2011)","journal-title":"Nature"},{"issue":"7399","key":"77_CR10","doi-asserted-by":"crossref","first-page":"502","DOI":"10.1038\/nature11071","volume":"485","author":"MF Berger","year":"2012","unstructured":"Berger, M.F., Hodis, E., Heffernan, T.P., et al.: Melanoma genome sequencing reveals frequent PREX2 mutations. Nature 485(7399), 502\u2013506 (2012)","journal-title":"Nature"},{"issue":"2","key":"77_CR11","doi-asserted-by":"crossref","first-page":"177","DOI":"10.2174\/1574893611308020005","volume":"8","author":"B Wang","year":"2013","unstructured":"Wang, B., Sun, W., Zhang, J., et al.: Current status of machine learning-based methods for identifying protein-protein interaction sites. Curr. Bioinform. 8(2), 177\u2013182 (2013)","journal-title":"Curr. Bioinform."},{"issue":"4","key":"77_CR12","doi-asserted-by":"crossref","first-page":"e58368","DOI":"10.1371\/journal.pone.0058368","volume":"8","author":"L Zhu","year":"2013","unstructured":"Zhu, L., You, Z.H., Huang, D.S., et al.: t-LSE: a novel robust geometric approach for modeling protein-protein interaction networks. PLoS ONE 8(4), e58368 (2013)","journal-title":"PLoS ONE"},{"issue":"7084","key":"77_CR13","doi-asserted-by":"crossref","first-page":"637","DOI":"10.1038\/nature04670","volume":"440","author":"NJ Krogan","year":"2006","unstructured":"Krogan, N.J., Cagney, G., Yu, H., et al.: Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature 440(7084), 637\u2013643 (2006)","journal-title":"Nature"},{"issue":"D1","key":"77_CR14","doi-asserted-by":"crossref","first-page":"D805","DOI":"10.1093\/nar\/gku1075","volume":"43","author":"SA Forbes","year":"2015","unstructured":"Forbes, S.A., Beare, D., Gunasekaran, P., et al.: COSMIC: exploring the world\u2019s knowledge of somatic mutations in human cancer. Nucleic Acids Res. 43(D1), D805\u2013D811 (2015)","journal-title":"Nucleic Acids Res."},{"key":"77_CR15","doi-asserted-by":"crossref","unstructured":"Finn R.D, Bateman, A., Clements, J., et al.: Pfam: the protein families database. Nucleic acids research, 2013: gkt1223","DOI":"10.1093\/nar\/gkt1223"},{"key":"77_CR16","unstructured":"UniProt Consortium and others. UniProt: a hub for protein information. Nucleic Acids Res. gku989 (2014)"},{"issue":"D1","key":"77_CR17","doi-asserted-by":"crossref","first-page":"D364","DOI":"10.1093\/nar\/gkt1210","volume":"42","author":"RD Finn","year":"2014","unstructured":"Finn, R.D., Miller, B.L., Clements, J., et al.: iPfam: a database of protein family and domain interactions found in the Protein Data Bank. Nucleic Acids Res. 42(D1), D364\u2013D373 (2014)","journal-title":"Nucleic Acids Res."},{"issue":"11","key":"77_CR18","doi-asserted-by":"crossref","first-page":"2498","DOI":"10.1101\/gr.1239303","volume":"13","author":"P Shannon","year":"2003","unstructured":"Shannon, P., Markiel, A., Ozier, O., et al.: Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 13(11), 2498\u20132504 (2003)","journal-title":"Genome Res."},{"key":"77_CR19","doi-asserted-by":"crossref","unstructured":"Scardoni, G., Tosadori, G., Faizan, M., Spoto, F., Fabbri, F., Laudanna, C.: Biological network analysis with CentiScaPe: centralities and experimental dataset integration[J]. F1000Res. 3 (2014)","DOI":"10.12688\/f1000research.4477.1"},{"issue":"3","key":"77_CR20","doi-asserted-by":"crossref","first-page":"734","DOI":"10.1016\/S0006-291X(02)00543-0","volume":"294","author":"M Monji","year":"2002","unstructured":"Monji, M., Senju, S., Nakatsura, T., et al.: Head and neck cancer antigens recognized by the humoral immune system. Biochem. Biophys. Res. Commun. 294(3), 734\u2013741 (2002)","journal-title":"Biochem. Biophys. Res. Commun."},{"key":"77_CR21","unstructured":"Das, A., et al.: Role of voltage-gated T-type calcium channels in the viability of human melanoma. Universitat de Lleida (2012)"},{"issue":"44","key":"77_CR22","doi-asserted-by":"crossref","first-page":"5895","DOI":"10.1038\/onc.2010.331","volume":"29","author":"B Titz","year":"2010","unstructured":"Titz, B., Low, T., Komisopoulou, E., et al.: The proximal signaling network of the BCR-ABL1 oncogene shows a modular organization. Oncogene 29(44), 5895\u20135910 (2010)","journal-title":"Oncogene"},{"issue":"13","key":"77_CR23","doi-asserted-by":"crossref","first-page":"2061","DOI":"10.1091\/mbc.E13-10-0582","volume":"25","author":"KC Williams","year":"2014","unstructured":"Williams, K.C., McNeilly, R.E., Coppolino, M.G.: SNAP23, Syntaxin4, and vesicle-associated membrane protein 7 (VAMP7) mediate trafficking of membrane type 1\u2013matrix metalloproteinase (MT1-MMP) during invadopodium formation and tumor cell invasion. Mol. Biol. Cell 25(13), 2061\u20132070 (2014)","journal-title":"Mol. Biol. Cell"},{"issue":"5","key":"77_CR24","doi-asserted-by":"crossref","first-page":"647","DOI":"10.1002\/mas.20037","volume":"24","author":"CM Huang","year":"2005","unstructured":"Huang, C.M., Elmets, C.A., van Kampen, K.R., et al.: Prospective highlights of functional skin proteomics. Mass Spectrom. Rev. 24(5), 647\u2013660 (2005)","journal-title":"Mass Spectrom. Rev."},{"issue":"12","key":"77_CR25","doi-asserted-by":"crossref","first-page":"982","DOI":"10.1038\/nrd2983","volume":"8","author":"H Wulff","year":"2009","unstructured":"Wulff, H., Castle, N.A., Pardo, L.A.: Voltage-gated potassium channels as therapeutic targets. Nat. Rev. Drug Discov. 8(12), 982\u20131001 (2009)","journal-title":"Nat. Rev. Drug Discov."},{"key":"77_CR26","unstructured":"Bedi, U.: Regulation of H2B monoubiquitination pathway in breast cancer. Nieders\u00e4chsische Staats-und Universit\u00e4tsbibliothek G\u00f6ttingen (2014)"},{"issue":"1","key":"77_CR27","doi-asserted-by":"crossref","first-page":"161","DOI":"10.1016\/j.gene.2005.09.025","volume":"366","author":"XP Huang","year":"2006","unstructured":"Huang, X.P., Zhao, C.X., Li, Q.J., et al.: Alteration of RPL14 in squamous cell carcinomas and preneoplastic lesions of the esophagus. Gene 366(1), 161\u2013168 (2006)","journal-title":"Gene"},{"key":"77_CR28","unstructured":"Allen-Vercoe, E., Holt, R., Moore, R., et al.: Detection of fusobacterium in a gastrointestinal sample to diagnose gastrointestinal cancer: U.S. Patent Application 13\/877,421. 2011-10-4"},{"issue":"5","key":"77_CR29","doi-asserted-by":"crossref","first-page":"e139","DOI":"10.1371\/journal.pbio.0020139","volume":"2","author":"A Amsterdam","year":"2004","unstructured":"Amsterdam, A., Sadler, K.C., Lai, K., et al.: Many ribosomal protein genes are cancer genes in zebrafish. PLoS Biol. 2(5), e139 (2004)","journal-title":"PLoS Biol."},{"key":"77_CR30","doi-asserted-by":"crossref","first-page":"141","DOI":"10.1146\/annurev.biochem.76.060305.151318","volume":"76","author":"NJ Gay","year":"2007","unstructured":"Gay, N.J., Gangloff, M.: Structure and function of Toll receptors and their ligands. Annu. Rev. Biochem. 76, 141\u2013165 (2007)","journal-title":"Annu. Rev. Biochem."},{"issue":"1","key":"77_CR31","first-page":"10","volume":"14","author":"AK Jain","year":"2007","unstructured":"Jain, A.K., Jain, S., Rana, A.C.: Metabolic enzyme considerations in cancer therapy. Malays. J. Med. Sci.: MJMS 14(1), 10 (2007)","journal-title":"Malays. J. Med. Sci.: MJMS"},{"issue":"22","key":"77_CR32","doi-asserted-by":"crossref","first-page":"2782","DOI":"10.1038\/onc.2012.289","volume":"32","author":"X Zhang","year":"2013","unstructured":"Zhang, X., Wang, W., Wang, H., et al.: Identification of ribosomal protein S25 (RPS25)\u2013MDM2-p53 regulatory feedback loop. Oncogene 32(22), 2782\u20132791 (2013)","journal-title":"Oncogene"},{"issue":"6","key":"77_CR33","doi-asserted-by":"crossref","first-page":"707","DOI":"10.1016\/S0092-8674(02)00762-6","volume":"109","author":"GG McGill","year":"2002","unstructured":"McGill, G.G., Horstmann, M., Widlund, H.R., et al.: Bcl2 regulation by the melanocyte master regulator Mitf modulates lineage survival and melanoma cell viability. Cell 109(6), 707\u2013718 (2002)","journal-title":"Cell"},{"issue":"2","key":"77_CR34","doi-asserted-by":"crossref","first-page":"185","DOI":"10.1385\/CBB:40:2:185","volume":"40","author":"SR Sennoune","year":"2004","unstructured":"Sennoune, S.R., Luo, D., Mart\u00ednez-Zaguil\u00e1n, R.: Plasmalemmal vacuolar-type H+-ATPase in cancer biology. Cell Biochem. Biophys. 40(2), 185\u2013206 (2004)","journal-title":"Cell Biochem. Biophys."},{"issue":"19 Suppl.","key":"77_CR35","doi-asserted-by":"crossref","first-page":"1160","DOI":"10.1158\/1538-7445.AM2014-1160","volume":"74","author":"S Gunawardhana","year":"2014","unstructured":"Gunawardhana, S., Zins, K., Lucas, T., et al.: Novel CSF-1 receptor ligand IL-34 modulates macrophage-breast cancer cell crosstalk. Cancer Res. 74(19 Suppl.), 1160 (2014)","journal-title":"Cancer Res."}],"container-title":["Lecture Notes in Computer Science","Intelligent Computing Theories and Application"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-319-42291-6_77","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,7,2]],"date-time":"2022-07-02T19:23:06Z","timestamp":1656789786000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-319-42291-6_77"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016]]},"ISBN":["9783319422909","9783319422916"],"references-count":35,"URL":"https:\/\/doi.org\/10.1007\/978-3-319-42291-6_77","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2016]]}}}