{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,9]],"date-time":"2024-09-09T12:45:39Z","timestamp":1725885939822},"publisher-location":"Cham","reference-count":23,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783319581293"},{"type":"electronic","value":"9783319581309"}],"license":[{"start":{"date-parts":[[2017,1,1]],"date-time":"2017-01-01T00:00:00Z","timestamp":1483228800000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2017]]},"DOI":"10.1007\/978-3-319-58130-9_3","type":"book-chapter","created":{"date-parts":[[2017,4,26]],"date-time":"2017-04-26T10:28:51Z","timestamp":1493202531000},"page":"24-37","source":"Crossref","is-referenced-by-count":0,"title":["Dynamics of Self-replicating DNA-Tile Patterns"],"prefix":"10.1007","author":[{"given":"Vinay Kumar","family":"Gautam","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rajendra","family":"Prasath","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2017,4,27]]},"reference":[{"key":"3_CR1","doi-asserted-by":"publisher","unstructured":"Abel, Z., Benbernou, N., Damian, M., Demaine, E.D., Demaine, M.L., Flatland, R.Y., Kominers, S.D., Schweller, R.T.: Shape replication through self-assembly and RNase enzymes. In: SODA, pp. 1045\u20131064. SIAM (2010)","DOI":"10.1137\/1.9781611973075.85"},{"key":"3_CR2","doi-asserted-by":"publisher","unstructured":"Adleman, L., Cheng, Q., Goel, A., Huang, M.D.: Running time and program size for self-assembled squares. In: Symposium on Theory of Computing (STOC), New York, pp. 740\u2013748 (2001)","DOI":"10.1145\/380752.380881"},{"issue":"12","key":"3_CR3","doi-asserted-by":"publisher","first-page":"2586","DOI":"10.1021\/nl052038l","volume":"5","author":"RD Barish","year":"2005","unstructured":"Barish, R.D., Rothemund, P.W., Winfree, E.: Two computational primitives for algorithmic self-assembly: copying and counting. Nano Lett. 5(12), 2586\u20132592 (2005)","journal-title":"Nano Lett."},{"key":"3_CR4","doi-asserted-by":"publisher","first-page":"23","DOI":"10.1016\/j.tcs.2013.05.009","volume":"499","author":"E Czeizler","year":"2013","unstructured":"Czeizler, E., Popa, A.: Synthesizing minimal tile sets for complex patterns in the framework of patterned DNA self-assembly. Theor. Comput. Sci. 499, 23\u201337 (2013)","journal-title":"Theor. Comput. Sci."},{"issue":"3","key":"3_CR5","doi-asserted-by":"publisher","first-page":"589","DOI":"10.1007\/s11047-008-9093-9","volume":"8","author":"K Fujibayashi","year":"2009","unstructured":"Fujibayashi, K., Zhang, D.Y., Winfree, E., Murata, S.: Error suppression mechanisms for DNA tile self-assembly and their simulation. Nat. Comput. 8(3), 589\u2013612 (2009)","journal-title":"Nat. Comput."},{"key":"3_CR6","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"119","DOI":"10.1007\/978-3-319-13749-0_11","volume-title":"Theory and Practice of Natural Computing","author":"VK Gautam","year":"2014","unstructured":"Gautam, V.K., Czeizler, E., Haddow, P.C., Kuiper, M.: Design of a minimal system for self-replication of rectangular patterns of DNA tiles. In: Dediu, A.-H., Lozano, M., Mart\u00edn-Vide, C. (eds.) TPNC 2014. LNCS, vol. 8890, pp. 119\u2013133. Springer, Cham (2014). doi:\n10.1007\/978-3-319-13749-0_11"},{"key":"3_CR7","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"68","DOI":"10.1007\/978-3-642-45008-2_6","volume-title":"Theory and Practice of Natural Computing","author":"VK Gautam","year":"2013","unstructured":"Gautam, V.K., Haddow, P.C., Kuiper, M.: Reliable self-assembly by self-triggered activation of enveloped DNA tiles. In: Dediu, A.-H., Mart\u00edn-Vide, C., Truthe, B., Vega-Rodr\u00edguez, M.A. (eds.) TPNC 2013. LNCS, vol. 8273, pp. 68\u201379. Springer, Heidelberg (2013). doi:\n10.1007\/978-3-642-45008-2_6"},{"key":"3_CR8","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"62","DOI":"10.1007\/11493785_6","volume-title":"DNA Computing","author":"H-L Chen","year":"2005","unstructured":"Chen, H.-L., Goel, A.: Error free self-assembly using error prone tiles. In: Ferretti, C., Mauri, G., Zandron, C. (eds.) DNA 2004. LNCS, vol. 3384, pp. 62\u201375. Springer, Heidelberg (2005). doi:\n10.1007\/11493785_6"},{"key":"3_CR9","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"118","DOI":"10.1007\/978-3-319-01928-4_9","volume-title":"DNA Computing and Molecular Programming","author":"A Keenan","year":"2013","unstructured":"Keenan, A., Schweller, R.T., Zhong, X.: Exponential replication of patterns in the signal tile assembly model. In: Soloveichik, D., Yurke, B. (eds.) DNA 2013. LNCS, vol. 8141, pp. 118\u2013132. Springer, Cham (2013). doi:\n10.1007\/978-3-319-01928-4_9"},{"issue":"10","key":"3_CR10","doi-asserted-by":"publisher","first-page":"932","DOI":"10.1002\/anie.198609322","volume":"25","author":"G Kiedrowski von","year":"1986","unstructured":"von Kiedrowski, G.: A self-replicating hexadeoxynucleotide. Angew. Chem. Int. Ed. Engl. 25(10), 932\u2013935 (1986)","journal-title":"Angew. Chem. Int. Ed. Engl."},{"key":"3_CR11","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"15","DOI":"10.1007\/978-3-540-77962-9_2","volume-title":"DNA Computing","author":"U Majumder","year":"2008","unstructured":"Majumder, U., LaBean, T.H., Reif, J.H.: Activatable tiles: compact, robust programmable assembly and other applications. In: Garzon, M.H., Yan, H. (eds.) DNA 2007. LNCS, vol. 4848, pp. 15\u201325. Springer, Heidelberg (2008). doi:\n10.1007\/978-3-540-77962-9_2"},{"issue":"12","key":"3_CR12","doi-asserted-by":"publisher","first-page":"e424","DOI":"10.1371\/journal.pbio.0020424","volume":"2","author":"PW Rothemund","year":"2004","unstructured":"Rothemund, P.W., Papadakis, N., Winfree, E.: Algorithmic self-assembly of DNA Sierpinski triangles. PLoS Biol. 2(12), e424 (2004)","journal-title":"PLoS Biol."},{"key":"3_CR13","doi-asserted-by":"publisher","unstructured":"Rothemund, P.W.K., Winfree, E.: The program-size complexity of self-assembled squares. In: Proceedings of the Thirty-Second Annual ACM Symposium on Theory of Computing, STOC 2000, pp. 459\u2013468. ACM (2000)","DOI":"10.1145\/335305.335358"},{"key":"3_CR14","series-title":"Lecture Notes in Computer Science (Lecture Notes in Artificial Intelligence)","doi-asserted-by":"publisher","first-page":"734","DOI":"10.1007\/11553090_74","volume-title":"Advances in Artificial Life","author":"R Schulman","year":"2005","unstructured":"Schulman, R., Winfree, E.: Self-replication and evolution of DNA crystals. In: Capcarr\u00e8re, M.S., Freitas, A.A., Bentley, P.J., Johnson, C.G., Timmis, J. (eds.) ECAL 2005. LNCS (LNAI), vol. 3630, pp. 734\u2013743. Springer, Heidelberg (2005). doi:\n10.1007\/11553090_74"},{"issue":"17","key":"3_CR15","doi-asserted-by":"publisher","first-page":"6405","DOI":"10.1073\/pnas.1117813109","volume":"109","author":"R Schulman","year":"2012","unstructured":"Schulman, R., Yurke, B., Winfree, E.: Robust self-replication of combinatorial information via crystal growth and scission. Proc. Natl. Acad. Sci. 109(17), 6405\u20136410 (2012)","journal-title":"Proc. Natl. Acad. Sci."},{"issue":"1","key":"3_CR16","doi-asserted-by":"publisher","first-page":"55","DOI":"10.1016\/S0022-5193(89)80177-8","volume":"138","author":"E Szathmry","year":"1989","unstructured":"Szathmry, E., Gladkih, I.: Sub-exponential growth and coexistence of non-enzymatically replicating templates. J. Theor. Biol. 138(1), 55\u201358 (1989)","journal-title":"J. Theor. Biol."},{"key":"3_CR17","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1002\/j.1538-7305.1961.tb03975.x","volume":"40","author":"H Wang","year":"1961","unstructured":"Wang, H.: Proving theorems by pattern recognition II. Bell Syst. Tech. J. 40, 1\u201342 (1961)","journal-title":"Bell Syst. Tech. J."},{"issue":"7368","key":"3_CR18","doi-asserted-by":"publisher","first-page":"225","DOI":"10.1038\/nature10500","volume":"478","author":"T Wang","year":"2011","unstructured":"Wang, T., Sha, R., Dreyfus, R., Leunissen, M.E., Maass, C., Pine, D.J., Chaikin, P.M., Seeman, N.C.: Self-replication of information-bearing nanoscale patterns. Nature 478(7368), 225\u2013228 (2011)","journal-title":"Nature"},{"issue":"6693","key":"3_CR19","doi-asserted-by":"publisher","first-page":"539","DOI":"10.1038\/28998","volume":"394","author":"E Winfree","year":"1998","unstructured":"Winfree, E., Liu, F., Wenzler, L.A., Seeman, N.C.: Design and self-assembly of two-dimensional DNA crystals. Nature 394(6693), 539\u2013544 (1998)","journal-title":"Nature"},{"key":"3_CR20","unstructured":"Winfree, E.: Algorithmic Self-Assembly of DNA. Ph. D. thesis, California Institute of Technology Pasadena, California, USA (1998)"},{"key":"3_CR21","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"126","DOI":"10.1007\/978-3-540-24628-2_13","volume-title":"DNA Computing","author":"E Winfree","year":"2004","unstructured":"Winfree, E., Bekbolatov, R.: Proofreading tile sets: error correction for algorithmic self-assembly. In: Chen, J., Reif, J. (eds.) DNA 2003. LNCS, vol. 2943, pp. 126\u2013144. Springer, Heidelberg (2004). doi:\n10.1007\/978-3-540-24628-2_13"},{"issue":"5853","key":"3_CR22","doi-asserted-by":"publisher","first-page":"1121","DOI":"10.1126\/science.1148532","volume":"318","author":"DY Zhang","year":"2007","unstructured":"Zhang, D.Y., Turberfield, A.J., Yurke, B., Winfree, E.: Engineering entropy-driven reactions and networks catalyzed by DNA. Science 318(5853), 1121\u20131125 (2007)","journal-title":"Science"},{"issue":"2","key":"3_CR23","doi-asserted-by":"publisher","first-page":"183","DOI":"10.1007\/s11047-005-4465-x","volume":"5","author":"DY Zhang","year":"2006","unstructured":"Zhang, D.Y., Yurke, B.: A DNA superstructure-based replicator without product inhibition. Nat. Comput. 5(2), 183\u2013202 (2006)","journal-title":"Nat. Comput."}],"container-title":["Lecture Notes in Computer Science","Mining Intelligence and Knowledge Exploration"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-319-58130-9_3","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2017,4,26]],"date-time":"2017-04-26T10:30:02Z","timestamp":1493202602000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-319-58130-9_3"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017]]},"ISBN":["9783319581293","9783319581309"],"references-count":23,"URL":"https:\/\/doi.org\/10.1007\/978-3-319-58130-9_3","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2017]]}}}