{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,2,21]],"date-time":"2025-02-21T00:49:09Z","timestamp":1740098949441,"version":"3.37.3"},"publisher-location":"Cham","reference-count":14,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783319681269"},{"type":"electronic","value":"9783319681276"}],"license":[{"start":{"date-parts":[[2017,1,1]],"date-time":"2017-01-01T00:00:00Z","timestamp":1483228800000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2017]]},"DOI":"10.1007\/978-3-319-68127-6_10","type":"book-chapter","created":{"date-parts":[[2017,9,25]],"date-time":"2017-09-25T13:55:17Z","timestamp":1506347717000},"page":"89-98","source":"Crossref","is-referenced-by-count":2,"title":["Multimodal Simulations in Live Cell Imaging"],"prefix":"10.1007","author":[{"given":"David","family":"Svoboda","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michal","family":"Kozubek","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2017,9,26]]},"reference":[{"key":"10_CR1","unstructured":"Dunn, A.K.: Light scattering properties of cells. Ph.D. thesis, University of Texas at Austin (1997)"},{"key":"10_CR2","doi-asserted-by":"crossref","first-page":"94","DOI":"10.1007\/s12668-012-0041-x","volume":"2","author":"J Ghaye","year":"2012","unstructured":"Ghaye, J., Micheli, G., Carrara, S.: Simulated biological cells for receptor counting in fluorescence imaging. BioNanoSci. 2, 94\u2013103 (2012)","journal-title":"BioNanoSci."},{"key":"10_CR3","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"445","DOI":"10.1007\/978-3-642-31196-3_45","volume-title":"Information Technologies in Biomedicine","author":"A Korzynska","year":"2012","unstructured":"Korzynska, A., Iwanowski, M.: Artifical images for evaluation of segmentation results: bright field images of living cells. In: Pi\u0119tka, E., Kawa, J. (eds.) ITIB 2012. LNCS, vol. 7339, pp. 445\u2013455. Springer, Heidelberg (2012). doi:\n10.1007\/978-3-642-31196-3_45"},{"issue":"7","key":"10_CR4","first-page":"1010","volume":"26","author":"A Lehmussola","year":"2007","unstructured":"Lehmussola, A., Ruusuvuori, P., Selinummi, J., Huttunen, H., Yli-Harja, O.: Computational framework for simulating fluorescence microscope images with cell populations. IEEE TMI 26(7), 1010\u20131016 (2007)","journal-title":"IEEE TMI"},{"key":"10_CR5","doi-asserted-by":"crossref","unstructured":"Malm, P., Brun, A., Bengtsson, E.: Papsynth: simulated bright-field images of cervical smears. In: International Symposium on Biomedical Imaging: From Nano to Macro, pp. 117\u2013120. IEEE Press (2010)","DOI":"10.1109\/ISBI.2010.5490401"},{"issue":"9","key":"10_CR6","doi-asserted-by":"crossref","first-page":"e1000163","DOI":"10.1371\/journal.pcbi.1000163","volume":"4","author":"R Merks","year":"2008","unstructured":"Merks, R., Perryn, E.D., Shirinifard, A., Glazier, J.A.: Contact-inhibited chemotaxis in de novo and sprouting blood-vessel growth. PLoS Comput. Biol. 4(9), e1000163 (2008)","journal-title":"PLoS Comput. Biol."},{"key":"10_CR7","doi-asserted-by":"crossref","first-page":"179","DOI":"10.1016\/B978-0-12-388403-9.00007-2","volume":"110","author":"R Murphy","year":"2012","unstructured":"Murphy, R.: CellOrganizer: image-derived models of subcellular organization and protein distribution. Methods Cell Biol. 110, 179\u2013193 (2012)","journal-title":"Methods Cell Biol."},{"key":"10_CR8","doi-asserted-by":"crossref","unstructured":"Rezatofighi, S.H., Pitkeathly, W.T.E., Gould, S., Hartley, R., Mele, K., Hughes, W.E., Burchfield, J.G.: A framework for generating realistic synthetic sequences of total internal reflection fluorescence microscopy images. In: International Symposium on Biomedical Imaging, pp. 157\u2013160 (2013)","DOI":"10.1109\/ISBI.2013.6556436"},{"issue":"8","key":"10_CR9","doi-asserted-by":"crossref","first-page":"717","DOI":"10.1038\/nmeth.3442","volume":"12","author":"D Sage","year":"2015","unstructured":"Sage, D., Kirshner, H., Pengo, T., Stuurman, N., Min, J., Manley, S., Unser, M.: Quantitative evaluation of software packages for single-molecule localization microscopy. Nature Methods-Tech. Life Scientists Chem. 12(8), 717\u2013724 (2015)","journal-title":"Nature Methods-Tech. Life Scientists Chem."},{"issue":"2","key":"10_CR10","doi-asserted-by":"crossref","first-page":"342+","DOI":"10.1137\/100812951","volume":"10","author":"M Scianna","year":"2012","unstructured":"Scianna, M., Preziosi, L.: Multiscale developments of the cellular Potts model. Multiscale Model. Simul. 10(2), 342+ (2012)","journal-title":"Multiscale Model. Simul."},{"issue":"6","key":"10_CR11","doi-asserted-by":"crossref","first-page":"494","DOI":"10.1002\/cyto.a.20714","volume":"75A","author":"D Svoboda","year":"2009","unstructured":"Svoboda, D., Kozubek, M., Stejskal, S.: Generation of digital phantoms of cell nuclei and simulation of image formation in 3D image cytometry. Cytometry Part A 75A(6), 494\u2013509 (2009)","journal-title":"Cytometry Part A"},{"issue":"1","key":"10_CR12","doi-asserted-by":"crossref","first-page":"310","DOI":"10.1109\/TMI.2016.2606545","volume":"36","author":"D Svoboda","year":"2017","unstructured":"Svoboda, D., Ulman, V.: MitoGen: a framework for generating 3D synthetic time-lapse sequences of cell populations in fluorescence microscopy. IEEE Trans. Med. Imaging 36(1), 310\u2013321 (2017)","journal-title":"IEEE Trans. Med. Imaging"},{"key":"10_CR13","doi-asserted-by":"crossref","unstructured":"Svoboda, D., Ulman, V., Kov\u00e1\u010d, P., \u0160alingov\u00e1, B., Tesa\u0159ov\u00e1, L., Koutn\u00e1, I.K., Matula, P.: Vascular network formation in silico using the extended cellular Potts model. In: IEEE International Conference on Image Processing, pp. 3180\u20133183, September 2016","DOI":"10.1109\/ICIP.2016.7532946"},{"key":"10_CR14","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"209","DOI":"10.1007\/978-3-642-15705-9_26","volume-title":"Medical Image Computing and Computer-Assisted Intervention \u2013 MICCAI 2010","author":"Z Yin","year":"2010","unstructured":"Yin, Z., Li, K., Kanade, T., Chen, M.: Understanding the optics to aid microscopy image segmentation. In: Jiang, T., Navab, N., Pluim, J.P.W., Viergever, M.A. (eds.) MICCAI 2010. LNCS, vol. 6361, pp. 209\u2013217. Springer, Heidelberg (2010). doi:\n10.1007\/978-3-642-15705-9_26"}],"container-title":["Lecture Notes in Computer Science","Simulation and Synthesis in Medical Imaging"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-319-68127-6_10","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2017,9,25]],"date-time":"2017-09-25T13:58:10Z","timestamp":1506347890000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-319-68127-6_10"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017]]},"ISBN":["9783319681269","9783319681276"],"references-count":14,"URL":"https:\/\/doi.org\/10.1007\/978-3-319-68127-6_10","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2017]]}}}