{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,23]],"date-time":"2024-09-23T03:49:56Z","timestamp":1727063396961},"publisher-location":"Berlin, Heidelberg","reference-count":23,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540213789"},{"type":"electronic","value":"9783540246534"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2004]]},"DOI":"10.1007\/978-3-540-24653-4_4","type":"book-chapter","created":{"date-parts":[[2011,1,12]],"date-time":"2011-01-12T10:08:30Z","timestamp":1294826910000},"page":"31-40","source":"Crossref","is-referenced-by-count":15,"title":["Evolving Regular Expression-Based Sequence Classifiers for Protein Nuclear Localisation"],"prefix":"10.1007","author":[{"given":"Amine","family":"Heddad","sequence":"first","affiliation":[]},{"given":"Markus","family":"Brameier","sequence":"additional","affiliation":[]},{"given":"Robert M.","family":"MacCallum","sequence":"additional","affiliation":[]}],"member":"297","reference":[{"key":"4_CR1","doi-asserted-by":"publisher","first-page":"3389","DOI":"10.1093\/nar\/25.17.3389","volume":"25","author":"S.F. Altschul","year":"1997","unstructured":"Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J.H., Zhang, Z., Miller, W., Lipman, D.J.: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acid Research\u00a025, 3389\u20133402 (1997)","journal-title":"Nucleic Acid Research"},{"key":"4_CR2","doi-asserted-by":"publisher","first-page":"31","DOI":"10.1093\/nar\/25.1.31","volume":"25","author":"A. Bairoch","year":"1997","unstructured":"Bairoch, A., Apweller, R.: The SWISS-PROT protein sequence data bank and its supplement TrEMBL. Nucleic Acid Research\u00a025, 31\u201336 (1997)","journal-title":"Nucleic Acid Research"},{"key":"4_CR3","doi-asserted-by":"publisher","first-page":"217","DOI":"10.1093\/nar\/25.1.217","volume":"25","author":"A. Bairoch","year":"1997","unstructured":"Bairoch, A., Bucher, P., Hofmann, K.: The PROSITE database, its status in 1997. Nucleic Acid Research\u00a025, 217\u2013221 (1997)","journal-title":"Nucleic Acid Research"},{"key":"4_CR4","first-page":"17","volume":"5","author":"M. Brameier","year":"2001","unstructured":"Brameier, M., Banzhaf, W.: A comparison of linear genetic programming and neural networks in medical data mining. IEEE-EC\u00a05, 17\u201326 (2001)","journal-title":"IEEE-EC"},{"issue":"5","key":"4_CR5","first-page":"337","volume":"12","author":"D. Christophe","year":"2000","unstructured":"Christophe, D., Christophe-Hobertus, C., Pichon, B.: Nuclear targeting of proteins: how many different signals. CS\u00a012(5), 337\u2013341 (2000)","journal-title":"CS"},{"issue":"5","key":"4_CR6","doi-asserted-by":"publisher","first-page":"411","DOI":"10.1093\/embo-reports\/kvd092","volume":"1","author":"M. Cokol","year":"2000","unstructured":"Cokol, M., Nair, R., Rost, B.: Finding nuclear localization signals. EMBO Rep\u00a01(5), 411\u2013415 (2000)","journal-title":"EMBO Rep"},{"issue":"4","key":"4_CR7","doi-asserted-by":"publisher","first-page":"1005","DOI":"10.1006\/jmbi.2000.3903","volume":"300","author":"O. Emanuelsson","year":"2000","unstructured":"Emanuelsson, O., Nielsen, H., Brunak, S., von Heijne, G.: Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. Journal of Molecular Biology\u00a0300(4), 1005\u20131016 (2000)","journal-title":"Journal of Molecular Biology"},{"issue":"30","key":"4_CR8","doi-asserted-by":"publisher","first-page":"27981","DOI":"10.1074\/jbc.M303275200","volume":"278","author":"M.R.M. Fontes","year":"2003","unstructured":"Fontes, M.R.M., Teh, T., Jans, D., Brinkworth, R.I., Kobe, B.: Structural basis for the specificity of bipartite nuclear localization sequence binding by importin alpha. Journal of Biological Chemistry\u00a0278(30), 27981\u201327987 (2003)","journal-title":"Journal of Biological Chemistry"},{"key":"4_CR9","unstructured":"Hazel, P.: PCRE - Perl Compatible Regular Expressions library, \n                    \n                      http:\/\/www.pcre.org"},{"key":"4_CR10","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"44","DOI":"10.1007\/3-540-36605-9_5","volume-title":"Applications of Evolutionary Computing","author":"D. Howard","year":"2003","unstructured":"Howard, D., Benson, K.: Promoter prediction with a GP-automaton. In: Raidl, G.R., Cagnoni, S., Cardalda, J.J.R., Corne, D.W., Gottlieb, J., Guillot, A., Hart, E., Johnson, C.G., Marchiori, E., Meyer, J.-A., Middendorf, M. (eds.) EvoIASP 2003, EvoWorkshops 2003, EvoSTIM 2003, EvoROB\/EvoRobot 2003, EvoCOP 2003, EvoBIO 2003, and EvoMUSART 2003. LNCS, vol.\u00a02611, pp. 44\u201353. Springer, Heidelberg (2003)"},{"issue":"5","key":"4_CR11","doi-asserted-by":"publisher","first-page":"635","DOI":"10.1093\/bioinformatics\/btg036","volume":"19","author":"L.J. Jensen","year":"2003","unstructured":"Jensen, L.J., Gupta, R., Staerfeldt, H.-H., Brunak, S.: Prediction of human protein function according to Gene Ontology categories. Bioinformatics\u00a019(5), 635\u2013642 (2003)","journal-title":"Bioinformatics"},{"issue":"8","key":"4_CR12","doi-asserted-by":"publisher","first-page":"1587","DOI":"10.1002\/pro.5560040817","volume":"4","author":"J.F. Jonassen","year":"1995","unstructured":"Jonassen, J.F.: Collins, and D. G. Higgins. Finding flexible patterns in unaligned protein sequences. Protein Science\u00a04(8), 1587\u20131595 (1995)","journal-title":"Protein Science"},{"key":"4_CR13","doi-asserted-by":"publisher","first-page":"195","DOI":"10.1006\/jmbi.1999.3091","volume":"292","author":"D.T. Jones","year":"1999","unstructured":"Jones, D.T.: Protein secondary structure prediction based on position-specific scoring matrices. Journal of Molecular Biology\u00a0292, 195\u2013202 (1999)","journal-title":"Journal of Molecular Biology"},{"key":"4_CR14","volume-title":"Genetic Programming: On the Programming of Computers by Natural Selection","author":"J.R. Koza","year":"1992","unstructured":"Koza, J.R.: Genetic Programming: On the Programming of Computers by Natural Selection. MIT Press, Cambridge (1992)"},{"key":"4_CR15","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"437","DOI":"10.1007\/BFb0040796","volume-title":"Evolutionary Programming VII","author":"J.R. Koza","year":"1998","unstructured":"Koza, J.R., Bennett III, F.H., Andre, D.: Using programmatic motifs and genetic programming to classify protein sequences as to cellular location. In: Porto, V.W., Waagen, D. (eds.) EP 1998. LNCS, vol.\u00a01447, pp. 437\u2013447. Springer, Heidelberg (1998)"},{"issue":"4","key":"4_CR16","doi-asserted-by":"publisher","first-page":"570","DOI":"10.1128\/MMBR.65.4.570-594.2001","volume":"65","author":"G. Macara","year":"2001","unstructured":"Macara, G.: Transport into and out of the nucleus. Microbiology and Molecular Biology Reviews\u00a065(4), 570\u2013594 (2001)","journal-title":"Microbiology and Molecular Biology Reviews"},{"key":"4_CR17","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"369","DOI":"10.1007\/3-540-36599-0_34","volume-title":"Genetic Programming","author":"R.M. MacCallum","year":"2003","unstructured":"MacCallum, R.M.: Introducing a Perl Genetic Programming System: and Can Meta-evolution Solve the Bloat Problem? In: Ryan, C., Soule, T., Keijzer, M., Tsang, E.P.K., Poli, R., Costa, E. (eds.) EuroGP 2003. LNCS, vol.\u00a02610, pp. 369\u2013378. Springer, Heidelberg (2003)"},{"key":"4_CR18","first-page":"442","volume":"405","author":"B.W. Matthews","year":"1975","unstructured":"Matthews, B.W.: Comparison of the predicted and observed secondary structure of T4 phage lysozyme. Biochem. Biophys. Acta\u00a0405, 442\u2013451 (1975)","journal-title":"Biochem. Biophys. Acta"},{"issue":"1","key":"4_CR19","doi-asserted-by":"publisher","first-page":"315","DOI":"10.1093\/nar\/gkg046","volume":"31","author":"N.J. Mulder","year":"2003","unstructured":"Mulder, N.J., et al.: The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acid Research\u00a031(1), 315\u2013318 (2003)","journal-title":"Nucleic Acid Research"},{"issue":"4","key":"4_CR20","doi-asserted-by":"publisher","first-page":"917","DOI":"10.1002\/prot.10507","volume":"53","author":"R. Nair","year":"2003","unstructured":"Nair, R., Rost, B.: Better prediction of sub-cellular localization by combining evolutionary and structural information. Proteins: Structure, Function and Genetics\u00a053(4), 917\u2013930 (2003)","journal-title":"Proteins: Structure, Function and Genetics"},{"issue":"1","key":"4_CR21","doi-asserted-by":"publisher","first-page":"34","DOI":"10.1016\/S0968-0004(98)01336-X","volume":"24","author":"K. Nakai","year":"1999","unstructured":"Nakai, K., Horton, P.: PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization. Trends in Biochemical Science\u00a024(1), 34\u201336 (1999)","journal-title":"Trends in Biochemical Science"},{"key":"4_CR22","doi-asserted-by":"publisher","first-page":"63","DOI":"10.1016\/0076-6879(90)83007-V","volume":"183","author":"W.R. Pearson","year":"1990","unstructured":"Pearson, W.R.: Rapid and sensitive sequence comparison with FASTP and FASTA. Methods in Enzymology\u00a0183, 63\u201398 (1990)","journal-title":"Methods in Enzymology"},{"issue":"9","key":"4_CR23","doi-asserted-by":"publisher","first-page":"2230","DOI":"10.1093\/nar\/26.9.2230","volume":"26","author":"A. Reinhardt","year":"1998","unstructured":"Reinhardt, A., Hubbard, T.: Using neural networks for prediction of the subcellular location of proteins. Nucleic Acid Research\u00a026(9), 2230\u20132236 (1998)","journal-title":"Nucleic Acid Research"}],"container-title":["Lecture Notes in Computer Science","Applications of Evolutionary Computing"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-24653-4_4.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,5,2]],"date-time":"2021-05-02T22:58:15Z","timestamp":1619996295000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-24653-4_4"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2004]]},"ISBN":["9783540213789","9783540246534"],"references-count":23,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-24653-4_4","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2004]]}}}