{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,5]],"date-time":"2024-09-05T20:03:03Z","timestamp":1725566583000},"publisher-location":"Berlin, Heidelberg","reference-count":23,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540228172"},{"type":"electronic","value":"9783540286332"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2004]]},"DOI":"10.1007\/978-3-540-28633-2_58","type":"book-chapter","created":{"date-parts":[[2010,9,20]],"date-time":"2010-09-20T23:27:36Z","timestamp":1285025256000},"page":"544-553","source":"Crossref","is-referenced-by-count":0,"title":["A Kernel-Based Case Retrieval Algorithm with Application to Bioinformatics"],"prefix":"10.1007","author":[{"given":"Yan","family":"Fu","sequence":"first","affiliation":[]},{"given":"Qiang","family":"Yang","sequence":"additional","affiliation":[]},{"given":"Charles X.","family":"Ling","sequence":"additional","affiliation":[]},{"given":"Haipeng","family":"Wang","sequence":"additional","affiliation":[]},{"given":"Dequan","family":"Li","sequence":"additional","affiliation":[]},{"given":"Ruixiang","family":"Sun","sequence":"additional","affiliation":[]},{"given":"Hu","family":"Zhou","sequence":"additional","affiliation":[]},{"given":"Rong","family":"Zeng","sequence":"additional","affiliation":[]},{"given":"Yiqiang","family":"Chen","sequence":"additional","affiliation":[]},{"given":"Simin","family":"He","sequence":"additional","affiliation":[]},{"given":"Wen","family":"Gao","sequence":"additional","affiliation":[]}],"member":"297","reference":[{"key":"58_CR1","doi-asserted-by":"publisher","first-page":"198","DOI":"10.1038\/nature01511","volume":"422","author":"R. Aebersold","year":"2003","unstructured":"Aebersold, R., Mann, M.: Mass Spectrometry-Based Proteomics. Nature\u00a0422, 198\u2013207 (2003)","journal-title":"Nature"},{"key":"58_CR2","doi-asserted-by":"crossref","first-page":"39","DOI":"10.3233\/AIC-1994-7104","volume":"7","author":"A. Agnar","year":"1994","unstructured":"Agnar, A., Plaza, E.: Case-Based Reasoning: Foundational Issues, Methodological Variations, and System Approaches. AI Communications\u00a07, 39\u201359 (1994)","journal-title":"AI Communications"},{"key":"58_CR3","first-page":"37","volume":"6","author":"D.W. Aha","year":"1991","unstructured":"Aha, D.W., Kibler, D., Albert, M.K.: Instance-Based Learning Algorithms. Machine Learning\u00a06, 37\u201366 (1991)","journal-title":"Machine Learning"},{"issue":"Suppl. 1","key":"58_CR4","doi-asserted-by":"crossref","first-page":"S13","DOI":"10.1093\/bioinformatics\/17.suppl_1.S13","volume":"17","author":"V. Bafna","year":"2001","unstructured":"Bafna, V., Edwards, N.: SCOPE: a Probabilistic Model for Scoring Tandem Mass Spectra against a Peptide Database. Bioinformatics\u00a017(Suppl. 1), S13\u2013S21 (2001)","journal-title":"Bioinformatics"},{"key":"58_CR5","doi-asserted-by":"publisher","first-page":"144","DOI":"10.1145\/130385.130401","volume-title":"Proceedings of the Fifth Annual Workshop on Computational Learning Theory","author":"B.E. Boser","year":"1992","unstructured":"Boser, B.E., Guyon, I.M., Vapnik, V.N.: A Training Algorithm for Optimal Margin Classifiers. In: Haussler, D. (ed.) Proceedings of the Fifth Annual Workshop on Computational Learning Theory, pp. 144\u2013152. ACM Press, Pittsburgh (1992)"},{"key":"58_CR6","doi-asserted-by":"publisher","first-page":"2871","DOI":"10.1021\/ac9810516","volume":"71","author":"K.R. Clauser","year":"1999","unstructured":"Clauser, K.R., Baker, P., Burlingame, A.L.: Role of Accurate Mass Measurement (\u00b1 10 ppm) in Protein Identification Strategies Employing MS or MS\/MS and Database Searching. Anal. Chem.\u00a071, 2871\u20132882 (1999)","journal-title":"Anal. Chem."},{"key":"58_CR7","doi-asserted-by":"publisher","first-page":"976","DOI":"10.1016\/1044-0305(94)80016-2","volume":"5","author":"J.K. Eng","year":"1994","unstructured":"Eng, J.K., McCormack, A.L., Yates, J.R.: An Approach to Correlate Tandem Mass Spectral Data of Peptides with Amino Acid Sequences in a Protein Database. J. Am. Soc. Mass Spectrom\u00a05, 976\u2013989 (1994)","journal-title":"J. Am. Soc. Mass Spectrom"},{"key":"58_CR8","doi-asserted-by":"publisher","first-page":"998","DOI":"10.1002\/elps.1150190615","volume":"19","author":"D. Feny\u00f6","year":"1998","unstructured":"Feny\u00f6, D., Qin, J., Chait, B.T.: Protein Identification Using Mass Spectromic Information. Electrophoresis\u00a019, 998\u20131005 (1998)","journal-title":"Electrophoresis"},{"key":"58_CR9","doi-asserted-by":"publisher","first-page":"768","DOI":"10.1021\/ac0258709","volume":"75","author":"D. Feny\u00f6","year":"2003","unstructured":"Feny\u00f6, D., Beavis, R.C.: A Method for Assessing the Statistical Significance of Mass Spectrometry-Based Protein Identifications Using General Scoring Schemes. Anal. Chem.\u00a075, 768\u2013774 (2003)","journal-title":"Anal. Chem."},{"key":"58_CR10","doi-asserted-by":"publisher","first-page":"36","DOI":"10.1002\/1615-9861(200201)2:1<36::AID-PROT36>3.0.CO;2-W","volume":"2","author":"H.I. Field","year":"2002","unstructured":"Field, H.I., Feny\u00f6, D., Beavis, R.C.: RADARS, a Bioinformatics Solution that Automates Proteome Mass Spectral Analysis, Optimises Protein Identification, and Archives Data in a Relational Database. Proteomics\u00a02, 36\u201347 (2002)","journal-title":"Proteomics"},{"key":"58_CR11","doi-asserted-by":"crossref","unstructured":"Fu, Y., Yang, Q., Sun, R., Li, D., Zeng, R., Ling, C.X., Gao, W.: Exploiting the kernel trick to correlate fragment ions for peptide identification via tandem mass spectrometry. Bioinformatics (2004) 10.1093\/bioinformatics\/bth186","DOI":"10.1093\/bioinformatics\/bth186"},{"key":"58_CR12","doi-asserted-by":"publisher","first-page":"207","DOI":"10.1089\/153623102760092805","volume":"6","author":"A. Keller","year":"2002","unstructured":"Keller, A., Purvine, S., Nesvizhskii, A.I., Stolyar, S., Goodlett, D.R., Kolker, E.: Experimental Protein Mixture for Validating Tandem Mass Spectral Analysis. Omics\u00a06, 207\u2013212 (2002)","journal-title":"Omics"},{"key":"58_CR13","volume-title":"Case-Based Reasoning","author":"J.L. Kolodner","year":"1993","unstructured":"Kolodner, J.L.: Case-Based Reasoning. Morgan Kaufmann Publisher, California (1993)"},{"key":"58_CR14","volume-title":"Proceedings of the 14th National Conference on Artificial Intelligence","author":"D.B. Leake","year":"1997","unstructured":"Leake, D.B., Kinley, A., Wilson, D.: Case-Based Similarity Assessment: Estimating Adaptability from Experience. In: Proceedings of the 14th National Conference on Artificial Intelligence, AAAI Press, Menlo Park (1997)"},{"key":"58_CR15","doi-asserted-by":"publisher","first-page":"3551","DOI":"10.1002\/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2","volume":"20","author":"D.N. Perkins","year":"1999","unstructured":"Perkins, D.N., Pappin, D.J., Creasy, D.M., Cottrell, J.S.: Probability-Based Protein Identification by Searching Sequence Databases Using Mass Spectrometry Data. Electrophoresis\u00a020, 3551\u20133567 (1999)","journal-title":"Electrophoresis"},{"key":"58_CR16","first-page":"640","volume-title":"Advances in Neural Information. Processing Systems","author":"B. Sch\u00f6lkopf","year":"1998","unstructured":"Sch\u00f6lkopf, B., Simard, P., Smola, A.J., Vapnik, V.: Prior Knowledge in Support Vector Kernels. In: Jordan, M., Kearns, M., Solla, S. (eds.) Advances in Neural Information. Processing Systems, vol.\u00a010, pp. 640\u2013646. MIT Press, Cambridge (1998)"},{"key":"58_CR17","doi-asserted-by":"publisher","first-page":"1299","DOI":"10.1162\/089976698300017467","volume":"10","author":"B. Sch\u00f6lkopf","year":"1998","unstructured":"Sch\u00f6lkopf, B., Smola, A.J., M\u00fcller, K.R.: Nonlinear Component Analysis as a Kernel Eigenvalue Problem. Neural Computation\u00a010, 1299\u20131319 (1998)","journal-title":"Neural Computation"},{"key":"58_CR18","first-page":"377","volume-title":"Proceedings of the 14th International Joint Conference on Artificial Intelligence","author":"B. Smyth","year":"1995","unstructured":"Smyth, B., Keane, M.T.: Remembering to Forget: A Competence Preserving Deletion Policy for Case-Based Reasoning Systems. In: Proceedings of the 14th International Joint Conference on Artificial Intelligence, pp. 377\u2013382. Morgan Kaufmann, San Francisco (1995)"},{"key":"58_CR19","doi-asserted-by":"publisher","first-page":"249","DOI":"10.1016\/S0004-3702(98)00059-9","volume":"102","author":"B. Smyth","year":"1998","unstructured":"Smyth, B., Keane, M.T.: Adaptation-Guided Retrieval: Questioning the Similarity Assumption in Reasoning. Artificial Intelligence\u00a0102, 249\u2013293 (1998)","journal-title":"Artificial Intelligence"},{"key":"58_CR20","doi-asserted-by":"crossref","DOI":"10.1007\/978-1-4757-2440-0","volume-title":"The Nature of Statistical Learning Theory","author":"V.N. Vapnik","year":"1995","unstructured":"Vapnik, V.N.: The Nature of Statistical Learning Theory. Springer, New York (1995)"},{"key":"58_CR21","doi-asserted-by":"publisher","first-page":"85","DOI":"10.1016\/S1044-0305(01)00327-0","volume":"13","author":"K.X. Wan","year":"2002","unstructured":"Wan, K.X., Vidavsky, I., Gross, M.L.: Comparing Similar Spectra: from Similarity Index to Spectral Contrast Angle. J. Am. Soc. Mass Spectrom.\u00a013, 85\u201388 (2002)","journal-title":"J. Am. Soc. Mass Spectrom."},{"key":"58_CR22","volume-title":"Applying Case-Based Reasoning: Techniques for Enterprise Systems","author":"I. Watson","year":"1997","unstructured":"Watson, I.: Applying Case-Based Reasoning: Techniques for Enterprise Systems. Morgan Kaufmann Publisher, Inc., California (1997)"},{"key":"58_CR23","doi-asserted-by":"publisher","first-page":"1406","DOI":"10.1002\/1615-9861(200210)2:10<1406::AID-PROT1406>3.0.CO;2-9","volume":"2","author":"N. Zhang","year":"2002","unstructured":"Zhang, N., Aebersold, R., Schwikowski, B.: ProbID: A Probabilistic Algorithm to Identify Peptides through Sequence Database Searching Using Tandem Mass Spectral Data. Proteomics\u00a02, 1406\u20131412 (2002)","journal-title":"Proteomics"}],"container-title":["Lecture Notes in Computer Science","PRICAI 2004: Trends in Artificial Intelligence"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-28633-2_58.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,5,3]],"date-time":"2021-05-03T03:29:17Z","timestamp":1620012557000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-28633-2_58"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2004]]},"ISBN":["9783540228172","9783540286332"],"references-count":23,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-28633-2_58","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2004]]}}}