{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,5]],"date-time":"2024-09-05T08:28:19Z","timestamp":1725524899642},"publisher-location":"Berlin, Heidelberg","reference-count":42,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540707769"},{"type":"electronic","value":"9783540707783"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"DOI":"10.1007\/978-3-540-70778-3_2","type":"book-chapter","created":{"date-parts":[[2009,1,27]],"date-time":"2009-01-27T12:10:31Z","timestamp":1233058231000},"page":"49-68","source":"Crossref","is-referenced-by-count":1,"title":["Data Mining and Genetic Algorithms: Finding Hidden Meaning in Biological and Biomedical Data"],"prefix":"10.1007","author":[{"given":"Christopher M.","family":"Taylor","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Arvin","family":"Agah","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"2_CR1","unstructured":"123Genomics (2007), http:\/\/www.123genomics.com\/files\/analysis.html (retrieved June 2007)"},{"issue":"6","key":"2_CR2","doi-asserted-by":"publisher","first-page":"532","DOI":"10.1109\/TEVC.2003.819264","volume":"7","author":"W.-H. Au","year":"2003","unstructured":"Au, W.-H., Chan, K.C.C., Yao, X.: A novel evolutionary data mining algorithm with applications to churn prediction. IEEE Transactions on Evolutionary Computation\u00a07(6), 532\u2013545 (2003)","journal-title":"IEEE Transactions on Evolutionary Computation"},{"key":"2_CR3","unstructured":"BLAST (2007), http:\/\/www.ncbi.nlm.nih.gov\/BLAST (retrieved June 2007)"},{"key":"2_CR4","unstructured":"CDART (2007), http:\/\/www.ncbi.nlm.nih.gov\/Structure\/lexington\/lexington.cgi?cmd=rps (retrieved June 2007)"},{"key":"2_CR5","unstructured":"Chen, X.-W., Taylor, C.M.: Predicting protein function using sequence information (manuscript in preparation, 2007)"},{"issue":"21","key":"2_CR6","doi-asserted-by":"publisher","first-page":"6414","DOI":"10.1093\/nar\/gkh978","volume":"32","author":"Y. Chen","year":"2004","unstructured":"Chen, Y., Xu, D.: Global protein function annotation through mining genome-scale data in yeast Saccharomyces Cerevisiae. Nucleic Acids Research\u00a032(21), 6414\u20136424 (2004)","journal-title":"Nucleic Acids Research"},{"key":"2_CR7","doi-asserted-by":"crossref","unstructured":"Cheng, C.H., Fu, A.W.-C., Zhang, Y.: Entropy-based subspace clustering for mining numerical data. Knowledge Discovery and Data Mining, 84\u201393 (1999)","DOI":"10.1145\/312129.312199"},{"issue":"D","key":"2_CR8","doi-asserted-by":"publisher","first-page":"207","DOI":"10.1093\/nar\/gkj080","volume":"34","author":"M.K. Chow","year":"2006","unstructured":"Chow, M.K., Amin, A.A., Fulton, K.F., Fernando, T., Kamau, L., Batty, C., Louca, M., Ho, S., Whisstock, J.C., Bottomley, S.P., Buckle, A.M.: The REFOLD Database: A tool for the optimization of protein expression and refolding. Nucleic Acids Research\u00a034(D), 207\u2013212 (2006)","journal-title":"Nucleic Acids Research"},{"key":"2_CR9","unstructured":"CLC bio (2007), http:\/\/www.clcbio.com (retrieved June 2007)"},{"issue":"2","key":"2_CR10","doi-asserted-by":"publisher","first-page":"97","DOI":"10.1145\/772862.772877","volume":"4","author":"M. Craven","year":"2003","unstructured":"Craven, M.: The genomics of a signaling pathway: A KDD cup challenge task. SIGKDD Explorations\u00a04(2), 97\u201398 (2003)","journal-title":"SIGKDD Explorations"},{"key":"2_CR11","volume-title":"Relational Data Miningm","author":"L. Raedt De","year":"2001","unstructured":"De Raedt, L., Blockeel, H., Dehaspe, L., Van Laer, W.: Three companions for data mining in first order logic. In: Dzeroski, S., Lavrac, N. (eds.) Relational Data Miningm. Springer, Heidelberg (2001)"},{"key":"2_CR12","unstructured":"Dulay, N.: Genetic Algorithms. Surprise 96 Journal On-Line (2005), http:\/\/wwwhomes.doc.ic.ac.uk\/nd\/surprise_96\/journal\/vol4\/tcw2\/report.html (retrieved April 2005)"},{"key":"2_CR13","unstructured":"Evans, S., Lemon, S.J., Deters, C., Fusaro, R.M., Durham, C., Snyder, C., Lynch, H.T.: Using data mining to characterize DNA mutations by patient clinical features. In: Proc. AMIA Annual Fall Symposium, Nashville, Tennessee, October 1997, pp. 253\u2013257 (1997)"},{"key":"2_CR14","unstructured":"Fasta (2007), http:\/\/www.ebi.ac.uk\/fasta33 (retrieved June 2007)"},{"key":"2_CR15","doi-asserted-by":"crossref","unstructured":"Fawcett, T.: Using rule sets to maximize ROC performance. In: Proc. 2001 IEEE International Conference on Data Mining (ICDM 2001), Washington, DC, pp. 131\u2013138 (2001)","DOI":"10.1109\/ICDM.2001.989510"},{"key":"2_CR16","unstructured":"Flockhart, I.W., Radcliffe, N.J.: A Genetic algorithm-based approach to data mining. In: Proc. Second International Conference on Knowledge Discovery and Data Mining (KDD 1996), Portland, Oregon, August 1996, pp. 299\u2013302 (1996)"},{"key":"2_CR17","doi-asserted-by":"publisher","first-page":"67","DOI":"10.1023\/A:1006859319926","volume":"172","author":"R.D. Gietz","year":"1997","unstructured":"Gietz, R.D., Triggs-Raine, B., Robbins, A., Graham, K., Woods, R.: Identification of proteins that interact with a protein of interest: Applications of the yeast two-hybrid system. Molecular and Cellular Biochemistry\u00a0172, 67\u201379 (1997)","journal-title":"Molecular and Cellular Biochemistry"},{"key":"2_CR18","unstructured":"Global Mountain Biodiversity Assessment, Mountain Biodiversity Data Mining (2007), http:\/\/gmba.unibas.ch\/research\/datamining.htm (retrieved June 2007)"},{"key":"2_CR19","volume-title":"Genetic Algorithms in Search, Optimization, and Machine Learning","author":"D. Goldberg","year":"1989","unstructured":"Goldberg, D.: Genetic Algorithms in Search, Optimization, and Machine Learning. Addison-Wesley Publishing, Inc., Reading (1989)"},{"key":"2_CR20","unstructured":"Jech, T.: Set Theory. In: Zalta, E.N. (ed.) The Stanford Encyclopedia of Philosophy (2002), http:\/\/plato.stanford.edu\/contents.html"},{"key":"2_CR21","series-title":"Lecture Notes in Computer Science","volume-title":"Machine Learning: ECML-95","author":"R. Kohavi","year":"1995","unstructured":"Kohavi, R.: The power of decision tables. In: Lavra\u010d, N., Wrobel, S. (eds.) ECML 1995. LNCS, vol.\u00a0912. Springer, Heidelberg (1995)"},{"key":"2_CR22","first-page":"271","volume":"30","author":"R. Kohavi","year":"1998","unstructured":"Kohavi, R., Provost, F.: Glossary of Terms. Machine Learning, Special Issue on Applications of Machine Learning and the Knowledge Discovery Process\u00a030, 271\u2013274 (1998)","journal-title":"Machine Learning, Special Issue on Applications of Machine Learning and the Knowledge Discovery Process"},{"key":"2_CR23","doi-asserted-by":"crossref","unstructured":"Mendez, J., Falcon, A., Lorenzo, J.: A procedure for biological sensitive pattern matching in protein sequences. In: Proc. First Iberian Conference on Pattern Recognition and Image Analysis, Mallorca, Spain, June 2003, pp. 547\u2013555 (2003)","DOI":"10.1007\/978-3-540-44871-6_64"},{"issue":"1","key":"2_CR24","doi-asserted-by":"publisher","first-page":"15","DOI":"10.1007\/BF02703680","volume":"27","author":"T.B. Nandi","year":"2002","unstructured":"Nandi, T.B., Rao, C., Ramachandran, S.: Comparative genomics using data mining tools. J. BioSciences\u00a027(1), 15\u201325 (2002)","journal-title":"J. BioSciences"},{"key":"2_CR25","unstructured":"NCBI (2007), http:\/\/www.ncbi.nlm.nih.gov\/Tools\/ (retrieved June 2007)"},{"key":"2_CR26","unstructured":"Ofran, Y., Rost, B.: Predicted Protein-Protein Interaction Sites From Local Sequence Information (2003), http:\/\/citeseer.ist.psu.edu\/ofran03predicted.html (retrieved October 2007)"},{"key":"2_CR27","unstructured":"Pawlak, Z.: Rough sets present state and further prospects. In: Proc. Third International Workshop on Rough Set and Soft Computing, San Jose, California, pp. 72\u201376 (1994)"},{"key":"2_CR28","unstructured":"Protein Prospector (2007), http:\/\/prospector.ucsf.edu\/ (retrieved June 2007)"},{"key":"2_CR29","volume-title":"C4.5: Programs for Machine Learning","author":"R. Quinlan","year":"1993","unstructured":"Quinlan, R.: C4.5: Programs for Machine Learning. Morgan Kaufmann, San Diego (1993)"},{"issue":"1","key":"2_CR30","first-page":"84","volume":"1","author":"Z. Radivojevic","year":"2003","unstructured":"Radivojevic, Z., Cvetanovic, M., Milutinovic, V., Sievert, J.: Data mining: A brief overview and recent IPSI Research. Annals of Mathematics, Computing, and Teleinformatics\u00a01(1), 84\u201390 (2003)","journal-title":"Annals of Mathematics, Computing, and Teleinformatics"},{"key":"2_CR31","unstructured":"Rakotomalala, R.: TANAGRA: A free software for research and academic purposes. In: Proc. EGC 2005, RNTI-E-3, vol.\u00a02, pp. 697\u2013702 (2005) (in French)"},{"key":"2_CR32","doi-asserted-by":"crossref","unstructured":"Roden, J.C., King, B.W., Trout, D., Mortazavi, A., Wold, B.J., Hart, C.E.: Mining Gene expression data by interpreting principal components. BMC Bioinformatics\u00a07(194) (2006)","DOI":"10.1186\/1471-2105-7-194"},{"key":"2_CR33","unstructured":"Siler, W.: Rule-Based Reasoning: Antecedent and Consequent, Building Fuzzy Expert Systems (2005), http:\/\/members.aol.com\/wsiler\/chap03.htm (retrieved November 2005)"},{"key":"2_CR34","unstructured":"Straccia, U.: A fuzzy description logic. In: Proc. 15th National Conference on Artificial Intelligence (AAAI 1998), Madison, Wisconsin, pp. 594\u2013599 (1998)"},{"key":"2_CR35","unstructured":"Tanagra Project (2007), http:\/\/eric.univ-lyon2.fr\/~ricco\/tanagra\/en\/tanagra.html (retrieved June 2007)"},{"key":"2_CR36","doi-asserted-by":"crossref","unstructured":"Taylor, C.M., Agah, A.: Evolving Neural Network Topologies for Object Recognition. In: Proc. 6th International Symposium on Soft Computing for Industry (ISSCI 2006), Budapest, Hungary, July 2006, ISSCI-71, pp. 1\u20136 (2006)","DOI":"10.1109\/WAC.2006.376029"},{"key":"2_CR37","unstructured":"Taylor, C.M.: An enhanced genetic algorithm with direct manipulation of sets for data mining. Ph.D. Dissertation, University of Kansas (2008)"},{"key":"2_CR38","series-title":"Lecture Notes in Artificial Intelligence","volume-title":"Rough Sets and Current Trends in Computing","author":"J.J. Valdes","year":"2002","unstructured":"Valdes, J.J., Mateescu, G.: Time series model mining with similarity-based neuro-fuzzy networks and genetic algorithms: A parallel implementation. In: Alpigini, J.J., Peters, J.F., Skowron, A., Zhong, N. (eds.) RSCTC 2002. LNCS (LNAI), vol.\u00a02475. Springer, Heidelberg (2002)"},{"key":"2_CR39","unstructured":"VAST Search (2007), http:\/\/www.ncbi.nlm.nih.gov\/Structure\/VAST\/vastsearch.html (retrieved June 2007)"},{"key":"2_CR40","doi-asserted-by":"publisher","first-page":"111","DOI":"10.1016\/S1088-467X(99)00013-X","volume":"3","author":"J. Vesanto","year":"1999","unstructured":"Vesanto, J.: SOM-based data visualization methods. Intelligent Data Analysis\u00a03, 111\u2013126 (1999)","journal-title":"Intelligent Data Analysis"},{"key":"2_CR41","unstructured":"Wikipedia, Confusion Matrix (2007), http:\/\/en.wikipedia.org\/wiki\/Confusion_matrix (retrieved June 2007)"},{"issue":"6","key":"2_CR42","doi-asserted-by":"crossref","first-page":"439","DOI":"10.1136\/jamia.1994.95153433","volume":"1","author":"L.K. Woolery","year":"1994","unstructured":"Woolery, L.K., Grzymala-Busse, J.: Machine learning for an expert system to predict preterm birth risk. J. American Medical Informatics Association\u00a01(6), 439\u2013446 (1994)","journal-title":"J. American Medical Informatics Association"}],"container-title":["Studies in Computational Intelligence","Computational Intelligence in Biomedicine and Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-70778-3_2.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,5,3]],"date-time":"2021-05-03T04:28:29Z","timestamp":1620016109000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-70778-3_2"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[null]]},"ISBN":["9783540707769","9783540707783"],"references-count":42,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-70778-3_2","relation":{},"ISSN":["1860-949X","1860-9503"],"issn-type":[{"type":"print","value":"1860-949X"},{"type":"electronic","value":"1860-9503"}],"subject":[]}}