{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,5]],"date-time":"2024-09-05T04:57:07Z","timestamp":1725512227998},"publisher-location":"Berlin, Heidelberg","reference-count":15,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540716808"},{"type":"electronic","value":"9783540716815"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"DOI":"10.1007\/978-3-540-71681-5_36","type":"book-chapter","created":{"date-parts":[[2007,5,17]],"date-time":"2007-05-17T16:07:05Z","timestamp":1179418025000},"page":"518-532","source":"Crossref","is-referenced-by-count":1,"title":["RB-Finder: An Improved Distance-Based Sliding Window Method to Detect Recombination Breakpoints"],"prefix":"10.1007","author":[{"given":"Wah-Heng","family":"Lee","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wing-Kin","family":"Sung","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"36_CR1","doi-asserted-by":"crossref","first-page":"1198","DOI":"10.1093\/oxfordjournals.molbev.a004129","volume":"19","author":"D. Posada","year":"2002","unstructured":"Posada, D.: Evaluation of methods for detecting recombination from data sequences: Empirical data. Molecular Biology and Evolution\u00a019, 1198\u20131212 (2002)","journal-title":"Molecular Biology and Evolution"},{"key":"36_CR2","doi-asserted-by":"crossref","first-page":"326","DOI":"10.1093\/oxfordjournals.molbev.a025929","volume":"15","author":"G.F. Weiller","year":"1998","unstructured":"Weiller, G.F.: Phylogenetic profiles: a graphical method for detecting genetic recombination in homologous sequences. Molecular Biology and Evolution\u00a015, 326\u2013335 (1998)","journal-title":"Molecular Biology and Evolution"},{"key":"36_CR3","doi-asserted-by":"crossref","first-page":"375","DOI":"10.1093\/genetics\/163.1.375","volume":"163","author":"S.R. Myers","year":"2003","unstructured":"Myers, S.R., Griffiths, R.C.: Bounds on the minimum number of recombination events in a sample history. Genetics\u00a0163, 375\u2013394 (2003)","journal-title":"Genetics"},{"key":"36_CR4","doi-asserted-by":"crossref","first-page":"879","DOI":"10.1093\/genetics\/156.2.879","volume":"156","author":"M.H. Schierup","year":"2000","unstructured":"Schierup, M.H., Hein, J.: Consequences of recombination on traditional phylogenetic analysis. Genetics\u00a0156, 879\u2013891 (2000)","journal-title":"Genetics"},{"key":"36_CR5","doi-asserted-by":"publisher","first-page":"130","DOI":"10.1093\/bioinformatics\/16.2.130","volume":"16","author":"G. McGuire","year":"2000","unstructured":"McGuire, G., Wright, F.: TOPAL 2.0: improved detection of mosaic sequences within multiple alignments. Bioinformatics\u00a016, 130\u2013134 (2000)","journal-title":"Bioinformatics"},{"key":"36_CR6","doi-asserted-by":"crossref","first-page":"123","DOI":"10.1093\/bioinformatics\/17.suppl_1.S123","volume":"17","author":"D. Husmeier","year":"2001","unstructured":"Husmeier, D., Wright, F.: Probabilistic divergence measures for detecting interspecies recombination. Bioinformatics\u00a017, 123\u2013131 (2001)","journal-title":"Bioinformatics"},{"key":"36_CR7","doi-asserted-by":"publisher","first-page":"1797","DOI":"10.1093\/bioinformatics\/bti151","volume":"21","author":"D. Husmeier","year":"2005","unstructured":"Husmeier, D., Wright, F., Milne, I.: Detecting interspecific recombination with a pruned probabilistic divergence measure. Bioinformatics\u00a021, 1797\u20131806 (2005)","journal-title":"Bioinformatics"},{"key":"36_CR8","doi-asserted-by":"crossref","unstructured":"Ruths, D., Nakhleh, L.: RECOMP: A parsimony-based method for detecting recombination. In: Proceedings of The Fourth Asia-Pacific Bioinformatics Conference, pp. 59\u201368 (2006)","DOI":"10.1142\/9781860947292_0009"},{"key":"36_CR9","unstructured":"Press, W.H., Flannery, B.P., Teukolsky, S.A., Vetterling, W.T.: Kolmogorov-Smirnov Test. In: Numerical Recipes in FORTRAN: The Art of Scientific Computing, 2nd edn., pp. 617\u2013620 (1992)"},{"key":"36_CR10","doi-asserted-by":"publisher","first-page":"111","DOI":"10.1007\/BF01731581","volume":"16","author":"M. Kimura","year":"1980","unstructured":"Kimura, M.: A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution\u00a016, 111\u2013120 (1980)","journal-title":"Journal of Molecular Evolution"},{"key":"36_CR11","doi-asserted-by":"publisher","first-page":"4673","DOI":"10.1093\/nar\/22.22.4673","volume":"22","author":"J.D. Thompson","year":"1994","unstructured":"Thompson, J.D., Higgins, D.G., Gibson, T.J.: CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequencing weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res.\u00a022, 4673\u20134680 (1994)","journal-title":"Nucleic Acids Res."},{"key":"36_CR12","doi-asserted-by":"publisher","first-page":"373","DOI":"10.2174\/1568005033481006","volume":"3","author":"M. Sturmer","year":"2003","unstructured":"Sturmer, M., Doerr, W., Preiser, W.: Variety of interpretation systems for human immunodeficiency virus type 1 genotyping: Confirmatory information or additional confusion? Current Drug Targets Infectious Disorder\u00a03, 373\u2013382 (2003)","journal-title":"Current Drug Targets Infectious Disorder"},{"key":"36_CR13","unstructured":"Leitner, T., Korber, B., Daniels, M., Calef, C., Foley, B.: HIV-1 Subtype and Circulating Recombinant Form (CRF) Reference Sequences (2005), http:\/\/www.hiv.lanl.gov\/content\/hiv-db\/REVIEWS\/RefSeqs2005\/RefSeqs05.html"},{"key":"36_CR14","unstructured":"The HIV Sequence Database. http:\/\/www.hiv.lanl.gov\/content\/hiv-db\/mainpage.html"},{"key":"36_CR15","unstructured":"The Circulating Recombinant Forms. http:\/\/hiv-web.lanl.gov\/content\/hiv-db\/CRFs\/CRFs.html"}],"container-title":["Lecture Notes in Computer Science","Research in Computational Molecular Biology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-71681-5_36.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,8,13]],"date-time":"2021-08-13T21:50:40Z","timestamp":1628891440000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-71681-5_36"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[null]]},"ISBN":["9783540716808","9783540716815"],"references-count":15,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-71681-5_36","relation":{},"subject":[]}}