{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,5]],"date-time":"2024-09-05T04:58:27Z","timestamp":1725512307051},"publisher-location":"Berlin, Heidelberg","reference-count":14,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540720300"},{"type":"electronic","value":"9783540720317"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"DOI":"10.1007\/978-3-540-72031-7_10","type":"book-chapter","created":{"date-parts":[[2007,8,5]],"date-time":"2007-08-05T14:16:24Z","timestamp":1186323384000},"page":"109-120","source":"Crossref","is-referenced-by-count":0,"title":["Searching for Recombinant Donors in a Phylogenetic Network of Serial Samples"],"prefix":"10.1007","author":[{"given":"Patricia","family":"Buendia","sequence":"first","affiliation":[]},{"given":"Giri","family":"Narasimhan","sequence":"additional","affiliation":[]}],"member":"297","reference":[{"key":"10_CR1","unstructured":"Fan, J., Robertson, D.: Links to recombinant sequence analysis\/detection programs (2006), http:\/\/bioinf.man.ac.uk\/recombination\/programs.shtml"},{"key":"10_CR2","doi-asserted-by":"crossref","first-page":"396","DOI":"10.1007\/s00239-001-0034-9","volume":"54","author":"D. Posada","year":"2002","unstructured":"Posada, D., Crandall, K.: The effect of recombination on the accuracy of phylogeny reconstruction. Journal of Molecular Evolution\u00a054, 396\u2013402 (2002)","journal-title":"Journal of Molecular Evolution"},{"key":"10_CR3","doi-asserted-by":"crossref","first-page":"879","DOI":"10.1093\/genetics\/156.2.879","volume":"156","author":"M. Schierup","year":"2000","unstructured":"Schierup, M., Hein, J.: Consequences of recombination on traditional phylogenetic analysis. Genetics\u00a0156, 879\u2013891 (2000)","journal-title":"Genetics"},{"key":"10_CR4","doi-asserted-by":"crossref","first-page":"1425","DOI":"10.1093\/oxfordjournals.molbev.a003928","volume":"18","author":"M. Worobey","year":"2001","unstructured":"Worobey, M.: A novel approach to detecting and measuring recombination: new insights into evolution in viruses, bacteria, and mitochondria. Molecular Biology and Evolution\u00a018, 1425\u20131434 (2001)","journal-title":"Molecular Biology and Evolution"},{"issue":"24","key":"10_CR5","doi-asserted-by":"publisher","first-page":"13757","DOI":"10.1073\/pnas.241370698","volume":"98","author":"D. Posada","year":"2001","unstructured":"Posada, D., Crandall, K.A.: Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc. Natl. Acad. Sci. USA\u00a098(24), 13757\u201313762 (2001)","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10_CR6","doi-asserted-by":"crossref","first-page":"1929","DOI":"10.1093\/oxfordjournals.molbev.a003733","volume":"18","author":"C. Wiuf","year":"2001","unstructured":"Wiuf, C., Christensen, T., Hein, J.: A simulation study of the reliability of recombination detection methods. Molecular Biology and Evolution\u00a018, 1929\u20131939 (2001)","journal-title":"Molecular Biology and Evolution"},{"key":"10_CR7","doi-asserted-by":"publisher","first-page":"98","DOI":"10.1089\/aid.2005.21.98","volume":"21","author":"D.P. Martin","year":"2005","unstructured":"Martin, D.P., et al.: A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints. AIDS Research and Human Retroviruses\u00a021, 98\u2013102 (2005)","journal-title":"AIDS Research and Human Retroviruses"},{"issue":"1","key":"10_CR8","doi-asserted-by":"crossref","first-page":"152","DOI":"10.1128\/JVI.73.1.152-160.1999","volume":"73","author":"K.S. Lole","year":"1999","unstructured":"Lole, K.S., et al.: Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. Journal of Virology\u00a073(1), 152\u2013160 (1999)","journal-title":"Journal of Virology"},{"key":"10_CR9","doi-asserted-by":"crossref","unstructured":"Strimmer, K., et al.: A novel exploratory method for visual recombination detection. Genome Biology 4(5) (2003)","DOI":"10.1186\/gb-2003-4-5-r33"},{"issue":"2","key":"10_CR10","doi-asserted-by":"publisher","first-page":"260","DOI":"10.1093\/bioinformatics\/bth490","volume":"21","author":"D.P. Martin","year":"2005","unstructured":"Martin, D.P., Williamson, C., Posada, D.: RDP2: recombination detection and analysis from sequence alignments. Bioinformatics\u00a021(2), 260\u2013262 (2005)","journal-title":"Bioinformatics"},{"issue":"4","key":"10_CR11","doi-asserted-by":"publisher","first-page":"925","DOI":"10.1093\/molbev\/msi084","volume":"22","author":"A.D. Tsaousis","year":"2005","unstructured":"Tsaousis, A.D., et al.: Widespread recombination in published animal mtDNA sequences. Molecular Biology and Evolution\u00a022(4), 925\u2013933 (2005)","journal-title":"Molecular Biology and Evolution"},{"issue":"18","key":"10_CR12","doi-asserted-by":"publisher","first-page":"2313","DOI":"10.1093\/bioinformatics\/btl387","volume":"22","author":"P. Buendia","year":"2006","unstructured":"Buendia, P., Narasimhan, G.: Serial NetEvolve: A flexible utility for generating serially-sampled sequences along a tree or recombinant network. Bioinformatics\u00a022(18), 2313\u20132314 (2006)","journal-title":"Bioinformatics"},{"key":"10_CR13","doi-asserted-by":"publisher","first-page":"1423","DOI":"10.1089\/aid.1995.11.1423","volume":"11","author":"M. Salminen","year":"1995","unstructured":"Salminen, M., et al.: Identification of recombination breakpoints in HIV-1 by bootscanning. AIDS Research and Human Retroviruses\u00a011, 1423\u20131425 (1995)","journal-title":"AIDS Research and Human Retroviruses"},{"key":"10_CR14","unstructured":"Siepel, A., Korber, B.: Scanning the Database for Recombinant HIV-1 Genomes. In: Human Retroviruses and AIDS Compendium Part III, pp. 35\u201360 (1995)"}],"container-title":["Lecture Notes in Computer Science","Bioinformatics Research and Applications"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-72031-7_10.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,8,21]],"date-time":"2021-08-21T07:12:08Z","timestamp":1629529928000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-72031-7_10"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[null]]},"ISBN":["9783540720300","9783540720317"],"references-count":14,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-72031-7_10","relation":{},"subject":[]}}