{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,4]],"date-time":"2024-09-04T22:50:27Z","timestamp":1725490227510},"publisher-location":"Berlin, Heidelberg","reference-count":16,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540733997"},{"type":"electronic","value":"9783540734000"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"DOI":"10.1007\/978-3-540-73400-0_63","type":"book-chapter","created":{"date-parts":[[2007,8,23]],"date-time":"2007-08-23T23:14:08Z","timestamp":1187910848000},"page":"497-504","source":"Crossref","is-referenced-by-count":0,"title":["A Graph Theoretic Approach to Protein Structure Selection"],"prefix":"10.1007","author":[{"given":"Marco","family":"Vassura","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Luciano","family":"Margara","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Piero","family":"Fariselli","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rita","family":"Casadio","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"63_CR1","doi-asserted-by":"crossref","DOI":"10.1017\/CBO9780511608704","volume-title":"Algebraic graph theory","author":"N. Biggs","year":"1974","unstructured":"Biggs, N.: Algebraic graph theory. Cambridge University Press-VIII, Cambridge (1974)"},{"issue":"Suppl 5","key":"63_CR2","doi-asserted-by":"publisher","first-page":"119","DOI":"10.1002\/prot.1170","volume":"45","author":"R. Bonneau","year":"2001","unstructured":"Bonneau, R., Tsai, J., Ruczinski, I., Chivian, D., Rohl, C., Strauss, C.E., Baker, D.: Rosetta in CASP4: progress in ab initio protein structure prediction. Proteins\u00a045(Suppl 5), 119\u2013126 (2001)","journal-title":"Proteins"},{"key":"63_CR3","doi-asserted-by":"crossref","unstructured":"Cherkassky, B.V., Goldberg, A.V.: On Implementing Push-Relabel Method for the Maximum Flow Problem. In: Proc. IPCO-4, pp. 157\u2013171 (1995)","DOI":"10.1007\/3-540-59408-6_49"},{"key":"63_CR4","volume-title":"Introduction to algorithms","author":"T.H. Cormen","year":"2001","unstructured":"Cormen, T.H., Leiserson, C.E., Rivest, R.L., Stein, C.: Introduction to algorithms. The MIT Press, London (2001)"},{"key":"63_CR5","doi-asserted-by":"publisher","first-page":"15","DOI":"10.1093\/protein\/12.1.15","volume":"12","author":"P. Fariselli","year":"1999","unstructured":"Fariselli, P., Casadio, R.: A neural network based predictor of residue contacts in proteins. Protein Eng.\u00a012, 15\u201321 (1999)","journal-title":"Protein Eng."},{"key":"63_CR6","doi-asserted-by":"publisher","first-page":"404","DOI":"10.1002\/prot.10171","volume":"48","author":"A.K. Felts","year":"2002","unstructured":"Felts, A.K., Gallicchio, E., Wallqvist, A., Levy, R.M.: Distinguishing native conformations of proteins from decoys with an effective free energyestimator based on the OPLS all-atom force field and the Surface Generalized Born solvent model. Proteins\u00a048, 404\u2013422 (2002)","journal-title":"Proteins"},{"key":"63_CR7","doi-asserted-by":"publisher","first-page":"60","DOI":"10.1016\/S0959-440X(97)80008-5","volume":"7","author":"A.V. Finkelstein","year":"1997","unstructured":"Finkelstein, A.V.: Protein structure: what is it possible to predict now? Curr. Opin. Struct. Biol.\u00a07, 60\u201371 (1997)","journal-title":"Curr Opin Struct Biol."},{"key":"63_CR8","unstructured":"Galassi, M., Davies, J., Theiler, J., Gough, B., Jungman, G., Booth, M., Rossi, F.: GNU Scientific Library Reference Manual - Revised 2nd edn. (2006) ISBN 0954161734"},{"key":"63_CR9","doi-asserted-by":"publisher","first-page":"176","DOI":"10.1016\/S0959-440X(02)00306-8","volume":"12","author":"C. Hardin","year":"2002","unstructured":"Hardin, C., Pogorelov, T.V., Luthey-Schulten, Z.: Ab initio protein structure prediction. Curr. Opin. Struct. Biol.\u00a012, 176\u2013181 (2002)","journal-title":"Curr. Opin. Struct. Biol."},{"key":"63_CR10","doi-asserted-by":"publisher","first-page":"831","DOI":"10.1006\/jmbi.1996.0809","volume":"2664","author":"B.H. Park","year":"1997","unstructured":"Park, B.H., Huang, E.S., Levitt, M.: Factors affecting the ability of energy functions to discriminate correct from incorrect folds. J. Mol. Biol.\u00a02664, 831\u2013846 (1997)","journal-title":"J. Mol. Biol."},{"key":"63_CR11","doi-asserted-by":"publisher","first-page":"985","DOI":"10.1006\/jmbi.1998.1645","volume":"277","author":"K.W. Plaxco","year":"1998","unstructured":"Plaxco, K.W., Simons, K.T., Baker, D.: Contact order, transition state placement and the refolding rates of single domain proteins. J. Mol. Bio.\u00a0277, 985\u2013994 (1998)","journal-title":"J. Mol. Bio."},{"key":"63_CR12","doi-asserted-by":"publisher","first-page":"895","DOI":"10.1006\/jmbi.1997.1479","volume":"275","author":"R. Samudrala","year":"1998","unstructured":"Samudrala, R., Moult, J.: An all-atom distance-dependent conditional probability discriminatory function for protein structure prediction. J. Mol. Biol.\u00a0275, 895\u2013916 (1998)","journal-title":"J. Mol. Biol."},{"key":"63_CR13","doi-asserted-by":"publisher","first-page":"776","DOI":"10.1093\/bioinformatics\/16.9.776","volume":"16","author":"N. Siew","year":"2000","unstructured":"Siew, N., Elofsson, A., Rychlewski, L., Fischer, D.: MaxSub: An automated measure for the assessment of protein structure prediction quality. Bioinformatics\u00a016, 776\u2013785 (2000)","journal-title":"Bioinformatics"},{"key":"63_CR14","doi-asserted-by":"publisher","first-page":"1316","DOI":"10.1089\/cmb.2005.12.1316","volume":"12","author":"S.C.E. Tosatto","year":"2005","unstructured":"Tosatto, S.C.E.: The Victor\/FRST Function for Model Quality Estimation. J. Comp. Biol.,\u00a012, 1316\u20131327 (2005)","journal-title":"J. Comp. Biol.,"},{"key":"63_CR15","doi-asserted-by":"publisher","first-page":"76","DOI":"10.1002\/prot.10454","volume":"53","author":"J. Tsai","year":"2003","unstructured":"Tsai, J., Bonneau, R., Morozov, A.V., Kuhlman, B., Rohl, C.A., Baker, D.: An improved protein decoy set for testing energy functions for protein structure prediction. Proteins\u00a053, 76\u201387 (2003)","journal-title":"Proteins"},{"key":"63_CR16","doi-asserted-by":"crossref","unstructured":"Vendruscolo, M., Dokholyan, N. V., Paci, E., Karplus, M.: Physycal review E, vol. 65(6 Pt 1):061910 (2002)","DOI":"10.1103\/PhysRevE.65.061910"}],"container-title":["Lecture Notes in Computer Science","Applications of Fuzzy Sets Theory"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-73400-0_63.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,4,27]],"date-time":"2021-04-27T06:10:24Z","timestamp":1619503824000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-73400-0_63"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[null]]},"ISBN":["9783540733997","9783540734000"],"references-count":16,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-73400-0_63","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[]}}