{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,4]],"date-time":"2024-09-04T22:50:32Z","timestamp":1725490232051},"publisher-location":"Berlin, Heidelberg","reference-count":10,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540733997"},{"type":"electronic","value":"9783540734000"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"DOI":"10.1007\/978-3-540-73400-0_83","type":"book-chapter","created":{"date-parts":[[2007,8,24]],"date-time":"2007-08-24T03:14:08Z","timestamp":1187925248000},"page":"651-658","source":"Crossref","is-referenced-by-count":2,"title":["Prediction of over Represented Transcription Factor Binding Sites in Co-regulated Genes Using Whole Genome Matching Statistics"],"prefix":"10.1007","author":[{"given":"Giulio","family":"Pavesi","sequence":"first","affiliation":[]},{"given":"Federico","family":"Zambelli","sequence":"additional","affiliation":[]}],"member":"297","reference":[{"key":"83_CR1","doi-asserted-by":"crossref","unstructured":"MacIsaac, K.D., Fraenkel, E.: Practical strategies for discovering regulatory DNA sequence motifs. PLoS Comput. Biol. 2(4), e36 (2006)","DOI":"10.1371\/journal.pcbi.0020036"},{"key":"83_CR2","doi-asserted-by":"publisher","first-page":"108","DOI":"10.1093\/nar\/gkj143","volume":"34","author":"V. Matys","year":"2006","unstructured":"Matys, V., Kel-Margoulis, O.V., Fricke, E., Liebich, I., Land, S., Barre-Dirrie, A., Reuter, I., Chekmenev, D., Krull, M., Hornischer, K., Voss, N., Stegmaier, P., Lewicki-Potapov, B., Saxel, H., Kel, A.E., Wingender, E.: TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucleic Acids Res\u00a034, D108\u2013110 (2006) (Database issue)","journal-title":"Nucleic Acids Res"},{"key":"83_CR3","doi-asserted-by":"publisher","first-page":"91","DOI":"10.1093\/nar\/gkh012","volume":"32","author":"A. Sandelin","year":"2004","unstructured":"Sandelin, A., Alkema, W., Engstrom, P., Wasserman, W.W., Lenhard, B.: JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic Acids Res\u00a032, 91\u201394 (2004) (Database issue)","journal-title":"Nucleic Acids Res"},{"issue":"1","key":"83_CR4","doi-asserted-by":"publisher","first-page":"16","DOI":"10.1093\/bioinformatics\/16.1.16","volume":"16","author":"G.D. Stormo","year":"2000","unstructured":"Stormo, G.D.: DNA binding sites: representation and discovery. Bioinformatics\u00a016(1), 16\u201323 (2000)","journal-title":"Bioinformatics"},{"issue":"4","key":"83_CR5","doi-asserted-by":"publisher","first-page":"430","DOI":"10.1093\/bioinformatics\/bti819","volume":"22","author":"T. Sauer","year":"2006","unstructured":"Sauer, T., Shelest, E., Wingender, E.: Evaluating phylogenetic footprinting for human-rodent comparisons. Bioinformatics\u00a022(4), 430\u2013437 (2006)","journal-title":"Bioinformatics"},{"issue":"4","key":"83_CR6","doi-asserted-by":"publisher","first-page":"1372","DOI":"10.1093\/nar\/gkh299","volume":"32","author":"M.C. Frith","year":"2004","unstructured":"Frith, M.C., Fu, Y., Yu, L., Chen, J.F., Hansen, U., Weng, Z.: Detection of functional DNA motifs via statistical over-representation. Nucleic Acids Res\u00a032(4), 1372\u20131381 (2004)","journal-title":"Nucleic Acids Res"},{"issue":"10","key":"83_CR7","doi-asserted-by":"publisher","first-page":"3154","DOI":"10.1093\/nar\/gki624","volume":"33","author":"S.J. Ho Sui","year":"2005","unstructured":"Ho Sui, S.J., Mortimer, J.R., Arenillas, D.J., Brumm, J., Walsh, C.J., Kennedy, B.P., Wasserman, W.W.: opossum: identification of over-represented transcription factor binding sites in co-expressed genes. Nucleic Acids Res\u00a033(10), 3154\u20133164 (2005)","journal-title":"Nucleic Acids Res"},{"key":"83_CR8","doi-asserted-by":"crossref","first-page":"396","DOI":"10.1186\/1471-2105-7-396","volume":"7","author":"M. Defrance","year":"2006","unstructured":"Defrance, M., Touzet, H.: Predicting transcription factor binding sites using local over-representation and comparative genomics. BMC Bioinformatics\u00a07, 396 (2006)","journal-title":"BMC Bioinformatics"},{"issue":"3","key":"83_CR9","doi-asserted-by":"publisher","first-page":"399","DOI":"10.1016\/j.molcel.2004.09.037","volume":"16","author":"H. Cam","year":"2004","unstructured":"Cam, H., Balciunaite, E., Blais, A., Spektor, A., Scarpulla, R.C., Young, R., Kluger, Y., Dynlacht, B.D.: A common set of gene regulatory networks links metabolism and growth inhibition. Mol Cell\u00a016(3), 399\u2013411 (2004)","journal-title":"Mol Cell"},{"issue":"17","key":"83_CR10","doi-asserted-by":"publisher","first-page":"4955","DOI":"10.1093\/nar\/gkh816","volume":"32","author":"R. Elkon","year":"2004","unstructured":"Elkon, R., Zeller, K.I., Linhart, C., Dang, C.V., Shamir, R., Shiloh, Y.: Silico identification of transcriptional regulators associated with c-Myc. Nucleic Acids Res\u00a032(17), 4955\u20134961 (2004)","journal-title":"Nucleic Acids Res"}],"container-title":["Lecture Notes in Computer Science","Applications of Fuzzy Sets Theory"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-73400-0_83.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,4,27]],"date-time":"2021-04-27T10:10:33Z","timestamp":1619518233000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-73400-0_83"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[null]]},"ISBN":["9783540733997","9783540734000"],"references-count":10,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-73400-0_83","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[]}}