{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,4]],"date-time":"2024-09-04T22:31:46Z","timestamp":1725489106646},"publisher-location":"Berlin, Heidelberg","reference-count":16,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540737308"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"DOI":"10.1007\/978-3-540-73731-5_6","type":"book-chapter","created":{"date-parts":[[2007,8,13]],"date-time":"2007-08-13T08:04:55Z","timestamp":1186992295000},"page":"57-68","source":"Crossref","is-referenced-by-count":2,"title":["New EST Trimming Procedure Applied to SUCEST Sequences"],"prefix":"10.1007","author":[{"given":"Christian","family":"Baudet","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zanoni","family":"Dias","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"6_CR1","first-page":"151","volume":"406","author":"A.L. Vettore","year":"2001","unstructured":"Vettore, A.L., da Silva, F.R., Kemper, E.L., Arruda, P.: The libraries that made SUCEST. Genetics and Molecular Biology\u00a0406, 151\u2013157 (2001)","journal-title":"Genetics and Molecular Biology"},{"key":"6_CR2","doi-asserted-by":"publisher","first-page":"1651","DOI":"10.1126\/science.2047873","volume":"252","author":"M.D. Adams","year":"1991","unstructured":"Adams, M.D., Kelley, J.M., Gocayne, J.D., Dubnick, M., Polymeropoulos, M.H., Xiao, H., Merril, C.R., Wu, A., Olde, B., Moreno, R.F., Kerlavage, A.R., McCombie, W.R., Venter, J.C.: Complementary DNA Sequencing: Expressed Sequence Tags and Human Genome Project. Science\u00a0252, 1651\u20131656 (1991)","journal-title":"Science"},{"issue":"1-4","key":"6_CR3","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1590\/S1415-47572001000100004","volume":"24","author":"G.P. Telles","year":"2001","unstructured":"Telles, G.P., da Silva, F.R.: Trimming and clustering sugarcane ESTs. Genetics and Molecular Biology\u00a024(1-4), 17\u201323 (2001)","journal-title":"Genetics and Molecular Biology"},{"issue":"11","key":"6_CR4","doi-asserted-by":"publisher","first-page":"1318","DOI":"10.1093\/bioinformatics\/btg159","volume":"19","author":"T.E. Scheetz","year":"2003","unstructured":"Scheetz, T.E., Trivedi, N., Roberts, C.A., Kucaba, T., Berger, B., Robinson, N.L., Birkett, C.L., Gavin, A.J., O\u2019Leary, B., Braun, T.A., Bonaldo, M.F., Robinson, H.P., Sheffield, V.C., Soares, M.B., Casavant, T.L.: ESTprep: preprocessing cDNA sequence. Bioinformatics\u00a019(11), 1318\u20131324 (2003)","journal-title":"Bioinformatics"},{"key":"6_CR5","doi-asserted-by":"publisher","first-page":"1093","DOI":"10.1093\/bioinformatics\/17.12.1093","volume":"17","author":"H. Chou","year":"2001","unstructured":"Chou, H., Holmes, M.H.: DNA sequence quality trimming and vector removal. Bioinformatics\u00a017, 1093\u20131104 (2001)","journal-title":"Bioinformatics"},{"key":"6_CR6","series-title":"Lecture Notes in Bioinformatics","doi-asserted-by":"crossref","first-page":"206","DOI":"10.1007\/11532323_24","volume-title":"Advances in Bioinformatics and Computational Biology","author":"C. Baudet","year":"2005","unstructured":"Baudet, C., Dias, Z.: New EST Trimming Strategy. In: Setubal, J.C., Verjovski-Almeida, S. (eds.) BSB 2005. LNCS (LNBI), vol.\u00a03594, pp. 206\u2013209. Springer, Heidelberg (2005)"},{"key":"6_CR7","doi-asserted-by":"publisher","first-page":"1359","DOI":"10.1101\/gr.145900","volume":"10","author":"M.R. Band","year":"2000","unstructured":"Band, M.R., Larson, J.H., Rebeiz, M., Green, C.A., Heyen, D.W., Donovan, J., Windish, R., Steining, C., Mahyuddin, P., Womack, J.E., Lewin, H.A.: An Ordered Comparative Map of the Cattle and Human Genomes. Genome Research\u00a010, 1359\u20131368 (2000)","journal-title":"Genome Research"},{"unstructured":"Cattle EST Project: The W. M. Keck Center for Comparative and Functional Genomics, University of Illinois at Urbana-Champaign (January 2005), \n                    \n                      http:\/\/titan.biotec.uiuc.edu\/cattle\/cattle_project.htm","key":"6_CR8"},{"key":"6_CR9","doi-asserted-by":"publisher","first-page":"545","DOI":"10.1007\/s003359900816","volume":"9","author":"R.Z. Ma","year":"1998","unstructured":"Ma, R.Z., van Eijk, M.J.T., Beever, J.E., Gu\u00e9rin, G., Mummery, C.L., Lewin, H.A.: Comparative analysis of 82 expressed sequence tags from a cattle ovary cDNA library. Mammalian Genome\u00a09, 545\u2013549 (1998)","journal-title":"Mammalian Genome"},{"issue":"1","key":"6_CR10","first-page":"169","volume":"5","author":"C. Baudet","year":"2006","unstructured":"Baudet, C., Dias, Z.: Analysis of slipped sequences in EST projects. Genetics and Molecular Research\u00a05(1), 169\u2013181 (2006)","journal-title":"Genetics and Molecular Research"},{"issue":"3","key":"6_CR11","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","volume":"215","author":"S.F. Altschul","year":"1990","unstructured":"Altschul, S.F., Gish, W., Miller, W., Myers, E.W., Lipman, D.J.: Basic local alignment search tool. Journal of Molecular Biology\u00a0215(3), 403\u2013410 (1990)","journal-title":"Journal of Molecular Biology"},{"key":"6_CR12","volume-title":"Introduction to Algorithms","author":"U. Manber","year":"1989","unstructured":"Manber, U.: Introduction to Algorithms. Addison-Wesley, Reading (1989)"},{"issue":"3","key":"6_CR13","doi-asserted-by":"crossref","first-page":"175","DOI":"10.1101\/gr.8.3.175","volume":"8","author":"B. Ewing","year":"1998","unstructured":"Ewing, B., Hillier, L., Wendl, M.C., Green, P.: Base-Calling of Automated Sequencer Traces Using Phred. I. Accuracy Assessment. Genome Research\u00a08(3), 175\u2013185 (1998)","journal-title":"Genome Research"},{"issue":"3","key":"6_CR14","doi-asserted-by":"crossref","first-page":"186","DOI":"10.1101\/gr.8.3.186","volume":"8","author":"B. Ewing","year":"1998","unstructured":"Ewing, B., Green, P.: Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities. Genome Research\u00a08(3), 186\u2013194 (1998)","journal-title":"Genome Research"},{"unstructured":"Green, P.: Phrap Homepage: phred, phrap, consed, swat, cross_match and Repeat-Masker Documentation (March 2004), \n                    \n                      http:\/\/www.phrap.org","key":"6_CR15"},{"key":"6_CR16","doi-asserted-by":"publisher","first-page":"868","DOI":"10.1101\/gr.9.9.868","volume":"9","author":"X. Huang","year":"1999","unstructured":"Huang, X., Madan, A.: CAP3: a DNA sequence assembly program. Genome Research\u00a09, 868\u2013877 (1999)","journal-title":"Genome Research"}],"container-title":["Lecture Notes in Computer Science","Advances in Bioinformatics and Computational Biology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-73731-5_6.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,4,27]],"date-time":"2021-04-27T05:57:36Z","timestamp":1619503056000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-73731-5_6"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[null]]},"ISBN":["9783540737308"],"references-count":16,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-73731-5_6","relation":{},"subject":[]}}