{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,1,21]],"date-time":"2025-01-21T02:40:30Z","timestamp":1737427230341,"version":"3.33.0"},"publisher-location":"Berlin, Heidelberg","reference-count":10,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540752851"},{"type":"electronic","value":"9783540752868"}],"license":[{"start":{"date-parts":[[2007,1,1]],"date-time":"2007-01-01T00:00:00Z","timestamp":1167609600000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2007]]},"DOI":"10.1007\/978-3-540-75286-8_2","type":"book-chapter","created":{"date-parts":[[2007,9,18]],"date-time":"2007-09-18T12:32:04Z","timestamp":1190118724000},"page":"11-18","source":"Crossref","is-referenced-by-count":2,"title":["C-Based Design Methodology for FPGA Implementation of ClustalW MSA"],"prefix":"10.1007","author":[{"given":"Yan Lin","family":"Aung","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Douglas L.","family":"Maskell","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Timothy F.","family":"Oliver","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bertil","family":"Schmidt","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"William","family":"Bong","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"issue":"7","key":"2_CR1","doi-asserted-by":"publisher","first-page":"1193","DOI":"10.1093\/bioinformatics\/bth055","volume":"20","author":"J. Ebedes","year":"2004","unstructured":"Ebedes, J., Datta, A.: Multiple Sequence Alignment in Parallel on a Workstation Cluster. Bioinformatics\u00a020(7), 1193\u20131195 (2004)","journal-title":"Bioinformatics"},{"key":"2_CR2","doi-asserted-by":"publisher","first-page":"851","DOI":"10.1109\/TCSII.2005.853340","volume":"52","author":"T.F. Oliver","year":"2005","unstructured":"Oliver, T.F., Schmidt, B., Maskell, D.L.: Reconfigurable Architectures for Bio-sequence Database Scanning on FPGAs. IEEE Trans. Circuits Syst. II\u00a052, 851\u2013855 (2005)","journal-title":"IEEE Trans. Circuits Syst. II"},{"key":"2_CR3","doi-asserted-by":"publisher","first-page":"185","DOI":"10.1109\/FPGA.1993.279464","volume-title":"IEEE Workshop on FPGAs for Custom Computing Machines","author":"D.T. Hoang","year":"1993","unstructured":"Hoang, D.T.: Searching Genetic Databases on Splash 2. In: IEEE Workshop on FPGAs for Custom Computing Machines, pp. 185\u2013191. IEEE Computer Society Press, Los Alamitos (1993)"},{"key":"2_CR4","doi-asserted-by":"crossref","unstructured":"Yamaguchi, Y., Maruyama, T., Konagaya, A.: High Speed Homology Search with FPGAs. In: Pacific Symposium on Biocomputing, pp. 271\u2013282 (2002)","DOI":"10.1142\/9789812799623_0025"},{"key":"2_CR5","doi-asserted-by":"crossref","unstructured":"Sullivan, C., Wilson, A., Chappell, S.: Using C based Logic Synthesis to Bridge the Productivity Gap. In: Proc. of the 2004 Conference on Asia South Pacific Design Automation, pp. 349\u2013354 (2004)","DOI":"10.1109\/ASPDAC.2004.1337598"},{"key":"2_CR6","doi-asserted-by":"publisher","first-page":"195","DOI":"10.1016\/0022-2836(81)90087-5","volume":"147","author":"T.F. Smith","year":"1981","unstructured":"Smith, T.F., Waterman, M.S.: Identification of Common Molecular Subsequences. J. Mol. Biol.\u00a0147, 195\u2013197 (1981)","journal-title":"J. Mol. Biol."},{"key":"2_CR7","unstructured":"Liu, W., Schmidt, B., Voss, G., Muller-Wittig, W.: Streaming Algorithms for Biological Sequence Alignment on GPUs. IEEE Trans. Parallel Distrib. Syst. (to be published)"},{"key":"2_CR8","unstructured":"Xilinx: Virtex-4 Family Overview. ds112.pdf (2007)"},{"issue":"16","key":"2_CR9","doi-asserted-by":"publisher","first-page":"3431","DOI":"10.1093\/bioinformatics\/bti508","volume":"21","author":"T. Oliver","year":"2005","unstructured":"Oliver, T., Schmidt, B., Nathan, D., Clemens, R., Maskell, D.: Using Reconfigurable Hardware to Accelerate Multiple Sequence Alignment with ClustalW. Bioinformatics\u00a021(16), 3431\u20133432 (2005)","journal-title":"Bioinformatics"},{"key":"2_CR10","doi-asserted-by":"crossref","unstructured":"Yu, C.W., Kwong, K.H., Lee, K.H., Leong, P.H.W.: A Smith-Waterman Systolic Cell. In: Proc. of 13th Int. Workshop Field Programmable Logic and Applications, pp. 375\u2013384 (2003)","DOI":"10.1007\/978-3-540-45234-8_37"}],"container-title":["Lecture Notes in Computer Science","Pattern Recognition in Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-75286-8_2","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,1,21]],"date-time":"2025-01-21T02:10:32Z","timestamp":1737425432000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-75286-8_2"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2007]]},"ISBN":["9783540752851","9783540752868"],"references-count":10,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-75286-8_2","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2007]]}}}