{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,5]],"date-time":"2024-09-05T06:56:41Z","timestamp":1725519401110},"publisher-location":"Berlin, Heidelberg","reference-count":20,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540884347"},{"type":"electronic","value":"9783540884361"}],"license":[{"start":{"date-parts":[[2008,1,1]],"date-time":"2008-01-01T00:00:00Z","timestamp":1199145600000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2008]]},"DOI":"10.1007\/978-3-540-88436-1_16","type":"book-chapter","created":{"date-parts":[[2008,10,6]],"date-time":"2008-10-06T12:56:07Z","timestamp":1223297767000},"page":"178-186","source":"Crossref","is-referenced-by-count":0,"title":["Domain-Domain Interaction Identification with a Feature Selection Approach"],"prefix":"10.1007","author":[{"given":"Xing-Ming","family":"Zhao","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Luonan","family":"Chen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"16_CR1","doi-asserted-by":"publisher","first-page":"823","DOI":"10.1038\/35015694","volume":"405","author":"D. Eisenberg","year":"2000","unstructured":"Eisenberg, D., Marcotte, E., Xenarios, I., Yeates, T.: Protein function in the post-genomic era. Nature\u00a0405, 823\u2013826 (2000)","journal-title":"Nature"},{"issue":"12","key":"16_CR2","doi-asserted-by":"publisher","first-page":"125","DOI":"10.1186\/gb-2006-7-12-r125","volume":"7","author":"Z. Itzhaki","year":"2006","unstructured":"Itzhaki, Z., Akiva, E., Altuvia, Y., Margalit, H.: Evolutionary conservation of domain-domain interactions. Genome Biology\u00a07(12), R125 (2006)","journal-title":"Genome Biology"},{"key":"16_CR3","doi-asserted-by":"crossref","unstructured":"Zhao, X., Wang, Y., Chen, L., Aihara, K.: Protein domain annotation with integration of heterogeneous information sources. Proteins: Structure, Function, and Bioinformatics (in press, 2008)","DOI":"10.1002\/prot.21943"},{"issue":"4","key":"16_CR4","doi-asserted-by":"publisher","first-page":"681","DOI":"10.1006\/jmbi.2001.4920","volume":"311","author":"E. Sprinzak","year":"2001","unstructured":"Sprinzak, E., Margalit, H.: Correlated sequence-signatures as markers of protein-protein interaction. J. Mol. Biol.\u00a0311(4), 681\u2013692 (2001)","journal-title":"J. Mol. Biol."},{"issue":"10","key":"16_CR5","doi-asserted-by":"publisher","first-page":"1540","DOI":"10.1101\/gr.153002","volume":"12","author":"M. Deng","year":"2002","unstructured":"Deng, M., Mehta, S., Sun, F., Chen, T.: Inferring domain-domain interactions from protein-protein interactions. Genome Res.\u00a012(10), 1540\u20131548 (2002)","journal-title":"Genome Res."},{"issue":"15","key":"16_CR6","doi-asserted-by":"publisher","first-page":"3279","DOI":"10.1093\/bioinformatics\/bti492","volume":"21","author":"Y. Liu","year":"2005","unstructured":"Liu, Y., Liu, N., Zhao, H.: Inferring protein-protein interactions through high-throughput interaction data from diverse organisms. Bioinformatics\u00a021(15), 3279\u20133285 (2005)","journal-title":"Bioinformatics"},{"key":"16_CR7","doi-asserted-by":"crossref","unstructured":"Riley, R., Lee, C., Sabatti, C., Eisenberg, D.: Inferring protein domain interactions from databases of interacting proteins. Genome Biol.\u00a06(10) (2005)","DOI":"10.1186\/gb-2005-6-10-r89"},{"issue":"1","key":"16_CR8","doi-asserted-by":"publisher","first-page":"289","DOI":"10.1093\/nar\/28.1.289","volume":"28","author":"I. Xenarios","year":"2000","unstructured":"Xenarios, I., Rice, D., Salwinski, L., Baron, M., Marcotte, E.M., et al.: DIP: the Database of Interacting Proteins. Nucl. Acids Res.\u00a028(1), 289\u2013291 (2000)","journal-title":"Nucl. Acids Res."},{"issue":"11","key":"16_CR9","doi-asserted-by":"publisher","first-page":"104","DOI":"10.1186\/gb-2006-7-11-r104","volume":"7","author":"K. Guimaraes","year":"2006","unstructured":"Guimaraes, K., Jothi, R., Zotenko, E., Przytycka, T.: Predicting domain-domain interactions using a parsimony approach. Genome Biology\u00a07(11), R104 (2006)","journal-title":"Genome Biology"},{"issue":"1","key":"16_CR10","doi-asserted-by":"publisher","first-page":"269","DOI":"10.1186\/1471-2105-7-269","volume":"7","author":"H. Lee","year":"2006","unstructured":"Lee, H., Deng, M., Sun, F., Chen, T.: An integrated approach to the prediction of domain-domain interactions. BMC Bioinformatics\u00a07(1), 269 (2006)","journal-title":"BMC Bioinformatics"},{"issue":"4","key":"16_CR11","doi-asserted-by":"publisher","first-page":"1125","DOI":"10.1002\/prot.21870","volume":"70","author":"X. Zhao","year":"2008","unstructured":"Zhao, X., Li, X., Chen, L., Aihara, K.: Protein classification with imbalanced data. Proteins: Structure, Function, and Bioinformatics\u00a070(4), 1125\u20131132 (2008)","journal-title":"Proteins: Structure, Function, and Bioinformatics"},{"key":"16_CR12","doi-asserted-by":"publisher","first-page":"57","DOI":"10.1186\/1471-2105-9-57","volume":"9","author":"X. Zhao","year":"2008","unstructured":"Zhao, X., Chen, L., Aihara, K.: Gene function prediction using labeled and unlabeled data. BMC Bioinformatics\u00a09, 57 (2008)","journal-title":"BMC Bioinformatics"},{"issue":"3","key":"16_CR13","doi-asserted-by":"publisher","first-page":"490","DOI":"10.1002\/prot.20865","volume":"63","author":"Y. Qi","year":"2006","unstructured":"Qi, Y., Bar-Joseph, Z., Klein-Seetharaman, J.: Evaluation of different biological data and computational classification methods for use in protein interaction prediction. Proteins: Structure, Function, and Bioinformatics\u00a063(3), 490\u2013500 (2006)","journal-title":"Proteins: Structure, Function, and Bioinformatics"},{"issue":"5659","key":"16_CR14","doi-asserted-by":"publisher","first-page":"808","DOI":"10.1126\/science.1091317","volume":"303","author":"A. Tong","year":"2004","unstructured":"Tong, A., Lesage, G., Bader, G., Ding, H., Xu, H., et al.: Global Mapping of the Yeast Genetic Interaction Network. Science\u00a0303(5659), 808\u2013813 (2004)","journal-title":"Science"},{"issue":"6","key":"16_CR15","doi-asserted-by":"publisher","first-page":"764","DOI":"10.1093\/bioinformatics\/btg054","volume":"19","author":"J. Weston","year":"2003","unstructured":"Weston, J., Perez-Cruz, F., Bousquet, O., Chapelle, O., Elisseeff, A., et al.: Feature selection and transduction for prediction of molecular bioactivity for drug design. Bioinformatics\u00a019(6), 764\u2013771 (2003)","journal-title":"Bioinformatics"},{"issue":"suppl.1","key":"16_CR16","doi-asserted-by":"publisher","first-page":"138","DOI":"10.1093\/nar\/gkh121","volume":"32","author":"A. Bateman","year":"2004","unstructured":"Bateman, A., Coin, L., Durbin, R., Finn, R., Hollich, V., et al.: The Pfam protein families database. Nucl. Acids Res.\u00a032(suppl.1), D138\u2013141 (2004)","journal-title":"Nucl. Acids Res."},{"issue":"suppl.1","key":"16_CR17","doi-asserted-by":"publisher","first-page":"656","DOI":"10.1093\/nar\/gkm761","volume":"36","author":"B. Raghavachari","year":"2008","unstructured":"Raghavachari, B., Tasneem, A., Przytycka, T., Jothi, R.: DOMINE: a database of protein domain interactions. Nucl. Acids Res.\u00a036(suppl.1), D656\u2013661 (2008)","journal-title":"Nucl. Acids Res."},{"issue":"suppl.1","key":"16_CR18","first-page":"413","volume":"33","author":"A. Stein","year":"2005","unstructured":"Stein, A., Russell, R., Aloy, P.: 3did: interacting protein domains of known three-dimensional structure. Nucl. Acids Res.\u00a033(suppl.1), D413\u2013417 (2005)","journal-title":"Nucl. Acids Res."},{"issue":"3","key":"16_CR19","doi-asserted-by":"publisher","first-page":"410","DOI":"10.1093\/bioinformatics\/bti011","volume":"21","author":"R. Finn","year":"2005","unstructured":"Finn, R., Marshall, M., Bateman, A.: iPfam: visualization of protein-protein interactions in PDB at domain and amino acid resolutions. Bioinformatics\u00a021(3), 410\u2013412 (2005)","journal-title":"Bioinformatics"},{"key":"16_CR20","doi-asserted-by":"publisher","first-page":"861","DOI":"10.1016\/j.jmb.2006.07.072","volume":"362","author":"J. Raja","year":"2006","unstructured":"Raja, J., Praveen, F., Asba, T., Teresa, M.: Co-evolutionary analysis of domains in interacting proteins reveals insights into domain-domain interactions mediating protein-protein interactions. Journal of Molecular Biology\u00a0362, 861\u2013875 (2006)","journal-title":"Journal of Molecular Biology"}],"container-title":["Lecture Notes in Computer Science","Pattern Recognition in Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-88436-1_16","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,3,3]],"date-time":"2019-03-03T16:21:55Z","timestamp":1551630115000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-88436-1_16"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2008]]},"ISBN":["9783540884347","9783540884361"],"references-count":20,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-88436-1_16","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2008]]}}}