{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,3,19]],"date-time":"2025-03-19T14:54:08Z","timestamp":1742396048330},"publisher-location":"Berlin, Heidelberg","reference-count":29,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783540888680"},{"type":"electronic","value":"9783540888697"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2009]]},"DOI":"10.1007\/978-3-540-88869-7_21","type":"book-chapter","created":{"date-parts":[[2009,8,12]],"date-time":"2009-08-12T17:41:55Z","timestamp":1250098915000},"page":"411-425","source":"Crossref","is-referenced-by-count":8,"title":["A New Mathematical Model for the Heat Shock Response"],"prefix":"10.1007","author":[{"given":"Ion","family":"Petre","sequence":"first","affiliation":[]},{"given":"Andrzej","family":"Mizera","sequence":"additional","affiliation":[]},{"given":"Claire L.","family":"Hyder","sequence":"additional","affiliation":[]},{"given":"Andrey","family":"Mikhailov","sequence":"additional","affiliation":[]},{"given":"John E.","family":"Eriksson","sequence":"additional","affiliation":[]},{"given":"Lea","family":"Sistonen","sequence":"additional","affiliation":[]},{"given":"Ralph-Johan","family":"Back","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2009,8,13]]},"reference":[{"key":"21_CR1","volume-title":"Essential cell biology","author":"B Alberts","year":"2004","unstructured":"Alberts B, Johnson A, Lewis J, Raff M, Roberts K, Walter P (2004) Essential cell biology, 2nd edn. Garland Science, London","edition":"2"},{"key":"21_CR2","volume-title":"Numerical analysis","author":"RL Burden","year":"1996","unstructured":"Burden RL, Douglas Faires J (1996) Numerical analysis. Thomson Brooks\/Cole, Pacific Grove"},{"issue":"2","key":"21_CR3","doi-asserted-by":"publisher","first-page":"86","DOI":"10.1379\/CSC-99r.1","volume":"10","author":"DR Ciocca","year":"2005","unstructured":"Ciocca DR, Calderwood SK (2005) Heat shock proteins in cancer: diagnostic, prognostic, predictive, and treatment implications. Cell Stress Chaperones 10(2):86\u2013103","journal-title":"Cell Stress Chaperones"},{"issue":"8","key":"21_CR4","doi-asserted-by":"publisher","first-page":"2736","DOI":"10.1073\/pnas.0403510102","volume":"102","author":"H El-Samad","year":"2005","unstructured":"El-Samad H, Kurata H, Doyle J, Gross CA, Khamash M (2005) Surviving heat shock: control strategies for robustness and performance. Proc Natl Acad Sci 102(8):2736\u20132741","journal-title":"Proc Natl Acad Sci"},{"key":"21_CR5","doi-asserted-by":"crossref","unstructured":"El-Samad H, Prajna S, Papachristodoulu A, Khamash M, Doyle J (2003) Model validation and robust stability analysis of the bacterial heat shock response using sostools. In: Proceedings of the 42nd IEEE conference on decision and control, pp 3766\u20133741","DOI":"10.1109\/CDC.2003.1271735"},{"key":"21_CR6","unstructured":"Guldberg CM, Waage P (1864) Studies concerning affinity. In: Forhandlinger CM (ed) Videnskabs-Selskabet i Christiana, p.\u00a035"},{"key":"21_CR7","doi-asserted-by":"publisher","first-page":"69","DOI":"10.1002\/prac.18790190111","volume":"127","author":"CM Guldberg","year":"1879","unstructured":"Guldberg CM, Waage P (1879) Concerning chemical affinity. Erdmann\u2019s J Pract Chem 127:69\u2013114","journal-title":"Erdmann\u2019s J Pract Chem"},{"issue":"24","key":"21_CR8","doi-asserted-by":"publisher","first-page":"3067","DOI":"10.1093\/bioinformatics\/btl485","volume":"22","author":"S Hoops","year":"2006","unstructured":"Hoops S, Sahle S, Gauges R, Lee C, Pahle J, Simus N, Singhal M, Xu L, Mendes P, Kummer U (2006) Copasi\u2014a complex pathway simulator. Bioinformatics 22(24):3067\u20133074","journal-title":"Bioinformatics"},{"key":"21_CR9","doi-asserted-by":"crossref","first-page":"11","DOI":"10.1242\/jcs.104.1.11","volume":"104","author":"HK Kampinga","year":"1993","unstructured":"Kampinga HK (1993) Thermotolerance in mammalian cells: protein denaturation and aggregation, and stress proteins. J Cell Sci 104:11\u201317","journal-title":"J Cell Sci"},{"issue":"4","key":"21_CR10","doi-asserted-by":"crossref","first-page":"2107","DOI":"10.1128\/MCB.17.4.2107","volume":"17","author":"MP Kline","year":"1997","unstructured":"Kline MP, Morimoto RI (1997) Repression of the heat shock factor 1 transcriptional activation domain is modulated by constitutive phosphorylation. Mol Cell Biol 17(4):2107\u20132115","journal-title":"Mol Cell Biol"},{"key":"21_CR11","volume-title":"Systems biology in practice","author":"E Klipp","year":"2006","unstructured":"Klipp E, Herwig R, Kowald A, Wierling C, Lehrach H (2006) Systems biology in practice. Wiley\u2013VCH, New York"},{"key":"21_CR12","doi-asserted-by":"crossref","unstructured":"Kurata H, El-Samad H, Yi TM, Khamash M, Doyle J (2001) Feedback regulation of the heat shock response in e.coli. In: Proceedings of the 40th IEEE conference on decision and control, pp 837\u2013842","DOI":"10.1109\/CDC.2001.980210"},{"issue":"6","key":"21_CR13","doi-asserted-by":"publisher","first-page":"1267","DOI":"10.1083\/jcb.122.6.1267","volume":"122","author":"JR Lepock","year":"1993","unstructured":"Lepock JR, Frey HE, Ritchie KP (1993) Protein denaturation in intact hepatocytes and isolated cellular organelles during heat shock. J Cell Biol 122(6):1267\u20131276","journal-title":"J Cell Biol"},{"issue":"1","key":"21_CR14","doi-asserted-by":"publisher","first-page":"14","DOI":"10.1002\/jcp.1041370103","volume":"137","author":"JR Lepock","year":"1988","unstructured":"Lepock JR, Frey HE, Rodahl AM, Kruuv J (1988) Thermal analysis of chl v79 cells using differential scanning calorimetry: Implications for hyperthermic cell killing and the heat shock response. J Cell Physiol 137(1):14\u201324","journal-title":"J Cell Physiol"},{"key":"21_CR15","first-page":"1147","volume":"1","author":"B Liu","year":"2002","unstructured":"Liu B, DeFilippo AM, Li Z (2002) Overcomming immune tolerance to cancer by heat shock protein vaccines. Mol Cancer Ther 1:1147\u20131151","journal-title":"Mol Cancer Ther"},{"key":"21_CR16","first-page":"363","volume-title":"Cancer gene therapy: past achievements and future challenges","author":"KV Lukacs","year":"2000","unstructured":"Lukacs KV, Pardo OE, Colston MJ, Geddes DM, Alton EWFW (2000) Heat shock proteins in cancer therapy. In: Habib (ed) Cancer gene therapy: past achievements and future challenges. Kluwer, Dordrecht, pp 363\u2013368"},{"key":"21_CR17","volume-title":"Principles of biochemistry","author":"DL Nelson","year":"2000","unstructured":"Nelson DL, Cox MM (2000) Principles of biochemistry, 3rd edn. Worth Publishers, New York","edition":"3"},{"key":"21_CR18","doi-asserted-by":"publisher","first-page":"97","DOI":"10.3109\/02656739809018218","volume":"14","author":"A Peper","year":"1997","unstructured":"Peper A, Grimbergent CA, Spaan JAE, Souren JEM, van Wijk R (1997) A mathematical model of the hsp70 regulation in the cell. Int J Hyperthermia 14:97\u2013124","journal-title":"Int J Hyperthermia"},{"key":"21_CR19","unstructured":"Petre I, Hyder CL, Mizera A, Mikhailov A, Eriksson JE, Sistonen L, Back R-J (2008) Two metabolites are enough to drive the eukaryotic heat shock response. Manuscript"},{"issue":"9382","key":"21_CR20","doi-asserted-by":"publisher","first-page":"469","DOI":"10.1016\/S0140-6736(03)14075-5","volume":"362","author":"AG Pockley","year":"2003","unstructured":"Pockley AG (2003) Heat shock proteins as regulators of the immune response. Lancet 362(9382):469\u2013476","journal-title":"Lancet"},{"key":"21_CR21","volume-title":"Numerical recipes: the art of scientific computing","author":"WH Press","year":"2007","unstructured":"Press WH, Teukolsky SA, Vetterling WT, Flammery BP (2007) Numerical recipes: the art of scientific computing. Cambridge University Press, Cambridge"},{"issue":"3","key":"21_CR22","doi-asserted-by":"publisher","first-page":"1646","DOI":"10.1529\/biophysj.104.055301","volume":"88","author":"TR Rieger","year":"2005","unstructured":"Rieger TR, Morimoto RI, Hatzimanikatis V (2005) Mathematical modeling of the eukaryotic heat shock response: dynamics of the hsp70 promoter. Biophys J 88(3):1646\u20131658","journal-title":"Biophys J"},{"issue":"1","key":"21_CR23","doi-asserted-by":"publisher","first-page":"120","DOI":"10.1002\/bit.1171","volume":"75","author":"R Srivastava","year":"2001","unstructured":"Srivastava R, Peterson MS, Bentley WE (2001) Stochastic kinetic analysis of the escherichia coli stres circuit using \u03c3 32-targeted antisense. Biotechnol Bioeng 75(1):120\u2013129","journal-title":"Biotechnol Bioeng"},{"key":"21_CR24","volume-title":"Modeling differential equations in biology","author":"CH Taubes","year":"2001","unstructured":"Taubes CH (2001) Modeling differential equations in biology. Cambridge University Press, Cambridge"},{"issue":"12","key":"21_CR25","doi-asserted-by":"publisher","first-page":"4219","DOI":"10.1073\/pnas.0500276102","volume":"102","author":"CJ Tomlin","year":"2005","unstructured":"Tomlin CJ, Axelrod JD (2005) Understanding biology by reverse engineering the control. Proc Natl Acad Sci 102(12):4219\u20134220","journal-title":"Proc Natl Acad Sci"},{"key":"21_CR26","doi-asserted-by":"publisher","first-page":"203","DOI":"10.1007\/BF01166355","volume":"5","author":"T Tur\u00e1nyi","year":"1990","unstructured":"Tur\u00e1nyi T (1990) Sensitivity analysis of complex kinetic systems. Tools and applications. J\u00a0Math Chem 5:203\u2013248","journal-title":"J\u00a0Math Chem"},{"issue":"12","key":"21_CR27","doi-asserted-by":"publisher","first-page":"1415","DOI":"10.1038\/nm1207-1415","volume":"13","author":"P Workman","year":"2007","unstructured":"Workman P, de Billy E (2007) Putting the heat on cancer. Nat Med 13(12):1415\u20131417","journal-title":"Nat Med"},{"key":"21_CR28","volume-title":"A first course in differential equations","author":"DG Zill","year":"2001","unstructured":"Zill DG (2001) A first course in differential equations. Thomson, Tompa"},{"key":"21_CR29","volume-title":"A first course in differential equations with modeling applications","author":"DG Zill","year":"2005","unstructured":"Zill DG (2005) A first course in differential equations with modeling applications. Thomson, Tompa"}],"container-title":["Natural Computing Series","Algorithmic Bioprocesses"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-540-88869-7_21.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,10,9]],"date-time":"2021-10-09T12:02:47Z","timestamp":1633780967000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-540-88869-7_21"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2009]]},"ISBN":["9783540888680","9783540888697"],"references-count":29,"URL":"https:\/\/doi.org\/10.1007\/978-3-540-88869-7_21","relation":{},"ISSN":["1619-7127"],"issn-type":[{"type":"print","value":"1619-7127"}],"subject":[],"published":{"date-parts":[[2009]]}}}