{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,5]],"date-time":"2024-09-05T19:24:15Z","timestamp":1725564255287},"publisher-location":"Berlin, Heidelberg","reference-count":21,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783642154607"},{"type":"electronic","value":"9783642154614"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2010]]},"DOI":"10.1007\/978-3-642-15461-4_32","type":"book-chapter","created":{"date-parts":[[2010,9,3]],"date-time":"2010-09-03T16:14:30Z","timestamp":1283530470000},"page":"360-367","source":"Crossref","is-referenced-by-count":0,"title":["ACOPHY: A Simple and General Ant Colony Optimization Approach for Phylogenetic Tree Reconstruction"],"prefix":"10.1007","author":[{"given":"Huy Q.","family":"Dinh","sequence":"first","affiliation":[]},{"given":"Bui Quang","family":"Minh","sequence":"additional","affiliation":[]},{"given":"Hoang Xuan","family":"Huan","sequence":"additional","affiliation":[]},{"given":"Arndt","family":"von Haeseler","sequence":"additional","affiliation":[]}],"member":"297","reference":[{"key":"32_CR1","first-page":"1552","volume-title":"Evolutionary Computation","author":"S. Ando","year":"2002","unstructured":"Ando, S., Iba, H.: Ant algorithm for construction of evolutionary tree. In: Evolutionary Computation, vol.\u00a02, pp. 1552\u20131557. IEEE Press, Los Alamitos (2002)"},{"key":"32_CR2","doi-asserted-by":"publisher","first-page":"309","DOI":"10.1016\/0196-8858(86)90038-2","volume":"7","author":"H.J. Bandelt","year":"1986","unstructured":"Bandelt, H.J., Dress, A.: Reconstructing the shape of a tree from observed dissimilarity data. Adv. Appl. Math.\u00a07, 309\u2013343 (1986)","journal-title":"Adv. Appl. Math."},{"key":"32_CR3","doi-asserted-by":"crossref","unstructured":"Catanzaro, D., Pesenti, R., Milinkovitch, M.: An ant colony optimization algorithm for phylogenetic estimation under the minimum evolution principle. BMC Evol. Biol.\u00a07 (2007)","DOI":"10.1186\/1471-2148-7-228"},{"key":"32_CR4","first-page":"233","volume":"19","author":"L.L. Cavalli-Sforza","year":"1967","unstructured":"Cavalli-Sforza, L.L., Edwards, A.W.F.: Phylogenetic analysis: Models and estimation procedures. Amer. J. Human. Genet.\u00a019, 233\u2013257 (1967)","journal-title":"Amer. J. Human. Genet."},{"key":"32_CR5","doi-asserted-by":"crossref","DOI":"10.7551\/mitpress\/1290.001.0001","volume-title":"Ant Colony Optimization","author":"M. Dorigo","year":"2004","unstructured":"Dorigo, M., Stuetzle, T.: Ant Colony Optimization. The MIT Press, Cambridge (2004)"},{"key":"32_CR6","volume-title":"Infering Phylogenies","author":"J. Felsenstein","year":"2004","unstructured":"Felsenstein, J.: Infering Phylogenies. Sinauer Associates, Sunderland (2004)"},{"key":"32_CR7","first-page":"164","volume":"5","author":"J. Felsenstein","year":"1989","unstructured":"Felsenstein, J.: PHYLIP \u2013 Phylogeny Inference Package (version 3.2). Cladistics\u00a05, 164\u2013166 (1989)","journal-title":"Cladistics"},{"key":"32_CR8","doi-asserted-by":"publisher","first-page":"406","DOI":"10.2307\/2412116","volume":"20","author":"W.M. Fitch","year":"1971","unstructured":"Fitch, W.M.: Toward defining the course of evolution: Minimum change for a specific tree topology. Syst. Zool.\u00a020, 406\u2013416 (1971)","journal-title":"Syst. Zool."},{"key":"32_CR9","doi-asserted-by":"publisher","first-page":"43","DOI":"10.1016\/S0196-8858(82)80004-3","volume":"3","author":"L.R. Foulds","year":"1982","unstructured":"Foulds, L.R., Graham, R.L.: The Steiner problem in phylogeny is NP-complete. Adv. Appl. Math.\u00a03, 43\u201349 (1982)","journal-title":"Adv. Appl. Math."},{"key":"32_CR10","doi-asserted-by":"publisher","first-page":"696","DOI":"10.1080\/10635150390235520","volume":"52","author":"S. Guindon","year":"2003","unstructured":"Guindon, S., Gascuel, O.: A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol.\u00a052, 696\u2013704 (2003)","journal-title":"Syst. Biol."},{"key":"32_CR11","doi-asserted-by":"publisher","first-page":"44","DOI":"10.2307\/1426329","volume":"3","author":"E.F. Harding","year":"1971","unstructured":"Harding, E.F.: The probabilities of rooted tree-shapes generated by random bifurcation. Adv. Appl. Prob.\u00a03, 44\u201377 (1971)","journal-title":"Adv. Appl. Prob."},{"key":"32_CR12","doi-asserted-by":"crossref","first-page":"21","DOI":"10.1016\/B978-1-4832-3211-9.50009-7","volume-title":"Mammalian Protein Metabolism","author":"T.H. Jukes","year":"1969","unstructured":"Jukes, T.H., Cantor, C.R.: Evolution of protein molecules. In: Munro, H.N. (ed.) Mammalian Protein Metabolism, vol.\u00a03, pp. 21\u2013123. Academic Press, New York (1969)"},{"key":"32_CR13","doi-asserted-by":"publisher","first-page":"10516","DOI":"10.1073\/pnas.162224399","volume":"99","author":"A.R. Lemmon","year":"2002","unstructured":"Lemmon, A.R., Milinkovitch, M.C.: The metapopulation genetic algorithm: An efficient solution for the problem of large phylogeny estimation. Proc. Natl. Acad. Sci. USA\u00a099, 10516\u201310521 (2002)","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"32_CR14","doi-asserted-by":"publisher","first-page":"3794","DOI":"10.1093\/bioinformatics\/bti594","volume":"21","author":"B.Q. Minh","year":"2005","unstructured":"Minh, B.Q., Vinh, L.S., von Haeseler, A., Schmidt, H.A.: pIQPNNI: Parallel reconstruction of large maximum likelihood phylogenies. Bioinformatics\u00a021, 3794\u20133796 (2005)","journal-title":"Bioinformatics"},{"key":"32_CR15","first-page":"581","volume":"4","author":"M. Perretto","year":"2005","unstructured":"Perretto, M., Lopes, H.S.: Reconstruction of phylogenetic trees using the ant colony optimization paradigm. Genet. Mol. Res.\u00a04, 581\u2013589 (2005)","journal-title":"Genet. Mol. Res."},{"key":"32_CR16","first-page":"235","volume":"13","author":"A. Rambaut","year":"1997","unstructured":"Rambaut, A., Grassly, N.C.: Seq-Gen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees. Comput. Appl. Biosci.\u00a013, 235\u2013238 (1997)","journal-title":"Comput. Appl. Biosci."},{"key":"32_CR17","doi-asserted-by":"publisher","first-page":"131","DOI":"10.1016\/0025-5564(81)90043-2","volume":"53","author":"D.F. Robinson","year":"1981","unstructured":"Robinson, D.F., Foulds, L.R.: Comparison of phylogenetic trees. Math. Biosci.\u00a053, 131\u2013147 (1981)","journal-title":"Math. Biosci."},{"key":"32_CR18","doi-asserted-by":"crossref","unstructured":"Stamatakis, A.P.: An efficient program for phylogenetic inference using simulated annealing. In: Online Proceedings of the 4th IEEE International Workshop on High Performance Computational Biology, Denver (2005)","DOI":"10.1109\/IPDPS.2005.90"},{"key":"32_CR19","doi-asserted-by":"publisher","first-page":"889","DOI":"10.1016\/S0167-739X(00)00043-1","volume":"16","author":"T. Stuetzle","year":"2000","unstructured":"Stuetzle, T., Hoos, H.: Max-min ant system. Future Gener. Comp. Sy.\u00a016, 889\u2013914 (2000)","journal-title":"Future Gener. Comp. Sy."},{"key":"32_CR20","doi-asserted-by":"publisher","first-page":"1565","DOI":"10.1093\/molbev\/msh176","volume":"21","author":"L.S. Vinh","year":"2004","unstructured":"Vinh, L.S., von Haeseler, A.: IQPNNI: Moving fast through tree space and stopping in time. Mol. Biol. Evol.\u00a021, 1565\u20131571 (2004)","journal-title":"Mol. Biol. Evol."},{"key":"32_CR21","doi-asserted-by":"publisher","first-page":"727","DOI":"10.1080\/10635150701611134","volume":"56","author":"S. Whelan","year":"2007","unstructured":"Whelan, S.: New approaches to phylogenetic tree search and their application to large numbers of protein alignments. Syst. Biol.\u00a056, 727\u2013740 (2007)","journal-title":"Syst. Biol."}],"container-title":["Lecture Notes in Computer Science","Swarm Intelligence"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-15461-4_32","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,3,19]],"date-time":"2019-03-19T22:01:11Z","timestamp":1553032871000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-642-15461-4_32"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2010]]},"ISBN":["9783642154607","9783642154614"],"references-count":21,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-15461-4_32","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2010]]}}}