{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,5]],"date-time":"2024-09-05T19:50:22Z","timestamp":1725565822499},"publisher-location":"Berlin, Heidelberg","reference-count":22,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783642156144"},{"type":"electronic","value":"9783642156151"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2010]]},"DOI":"10.1007\/978-3-642-15615-1_34","type":"book-chapter","created":{"date-parts":[[2010,9,14]],"date-time":"2010-09-14T10:18:27Z","timestamp":1284459507000},"page":"282-290","source":"Crossref","is-referenced-by-count":0,"title":["Prediction of Protein-Protein Interactions Using Subcellular and Functional Localizations"],"prefix":"10.1007","author":[{"given":"Yanliang","family":"Cai","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jiangsheng","family":"Yu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hanpin","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"34_CR1","doi-asserted-by":"publisher","first-page":"623","DOI":"10.1038\/35001009","volume":"403","author":"P. Uetz","year":"2000","unstructured":"Uetz, P., Giot, L., Cagney, G., Mansfield, T.A., Judson, R.S., Knight, J.R., Lockshon, D., Narayan, V., Srinivasan, M., Pochart, P., Qureshi-Emili, A., Li, Y., Godwin, B., Conover, D., Kalbfleisch, T., Vijayadamodar, G., Yang, M.J., Johnston, M., Fields, S., Rothberg, J.M.: A comprehensive analysis of protein-protein interactions in saccharomyces cerevisiae. Nature\u00a0403, 623\u2013627 (2000)","journal-title":"Nature"},{"key":"34_CR2","doi-asserted-by":"publisher","first-page":"141","DOI":"10.1038\/415141a","volume":"415","author":"A.C. Gavin","year":"2002","unstructured":"Gavin, A.C., B\u00f6sche, M., Krause, R., Grandi, P., Marzioch, M., Bauer, A., Schultz, J., Rick, J.M., Michon, A.M., Cruciat, C.M., Remor, M., H\u00f6fert, C., Schelder, M., Brajenovic, M., Ruffner, H., Merino, A., Klein, K., Hudak, M., Dickson, D., Rudi, T., Gnau, V., Bauch, A., Bastuck, S., Huhse, B., Leutwein, C., Heurtier, M.A., Copley, R.R., Edelmann, A., Querfurth, E., Rybin, V., Drewes, G., Raida, M., Bouwmeester, T., Bork, P., Seraphin, B., Kuster, B., Neubauer, G., Superti-Furga, G.: Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature\u00a0415, 141\u2013147 (2002)","journal-title":"Nature"},{"key":"34_CR3","doi-asserted-by":"publisher","first-page":"1971","DOI":"10.1101\/gr.206701","volume":"11","author":"R. Mrowka","year":"2001","unstructured":"Mrowka, R., Patzak, A., Herzel, H.: Is there a bias in proteome research? Genome Research\u00a011, 1971\u20131973 (2001)","journal-title":"Genome Research"},{"issue":"5","key":"34_CR4","doi-asserted-by":"publisher","first-page":"919","DOI":"10.1016\/S0022-2836(03)00239-0","volume":"327","author":"E. Sprinzaka","year":"2003","unstructured":"Sprinzaka, E., Sattath, S., Margalit, H.: How reliable are experimental protein-protein interaction data? Journal of Molecular Biology\u00a0327(5), 919\u2013923 (2003)","journal-title":"Journal of Molecular Biology"},{"issue":"1","key":"34_CR5","doi-asserted-by":"publisher","first-page":"303","DOI":"10.1093\/nar\/30.1.303","volume":"30","author":"I. Xenarios","year":"2002","unstructured":"Xenarios, I., Salw\u00ednski, L., Duan, X.J., Higney, P., Kim, S.M., Eisenberg, D.: Dip, the database of interacting proteins: a research tool for studying cellular networks of protein interactions. Nucleic Acids Research\u00a030(1), 303\u2013305 (2002)","journal-title":"Nucleic Acids Research"},{"issue":"4","key":"34_CR6","doi-asserted-by":"publisher","first-page":"681","DOI":"10.1006\/jmbi.2001.4920","volume":"311","author":"E. Sprinzaka","year":"2001","unstructured":"Sprinzaka, E., Margalit, H.: Correlated sequence-signatures as markers of protein-protein interaction. Journal of Molecular Biology\u00a0311(4), 681\u2013692 (2001)","journal-title":"Journal of Molecular Biology"},{"key":"34_CR7","doi-asserted-by":"publisher","first-page":"490","DOI":"10.1002\/prot.20865","volume":"63","author":"Y.J. Qi","year":"2006","unstructured":"Qi, Y.J., Joseph, Z.B., Seetharaman, J.K.: Evaluation of different biological data and computational classification methods for use in protein interaction prediction. PROTEINS: Structure, Function, and Bioinformatics\u00a063, 490\u2013500 (2006)","journal-title":"PROTEINS: Structure, Function, and Bioinformatics"},{"issue":"10","key":"34_CR8","doi-asserted-by":"publisher","first-page":"1207","DOI":"10.1093\/bioinformatics\/btl055","volume":"22","author":"L. Nanni","year":"2006","unstructured":"Nanni, L., Alessandra Lumini, A.: An ensemble of k-local hyperplanes for predicting protein-protein interactions. Bioinformatics\u00a022(10), 1207\u20131210 (2006)","journal-title":"Bioinformatics"},{"issue":"11","key":"34_CR9","doi-asserted-by":"publisher","first-page":"4337","DOI":"10.1073\/pnas.0607879104","volume":"104","author":"J.W. Shen","year":"2007","unstructured":"Shen, J.W., Zhang, J., Luo, X.M., Zhu, W.L., Yu, K.Q., Chen, K.X., Li, Y.X., Jiang, H.L.: Predicting protein-protein interactions based only on sequences information. PNAS\u00a0104(11), 4337\u20134341 (2007)","journal-title":"PNAS"},{"key":"34_CR10","doi-asserted-by":"publisher","first-page":"751","DOI":"10.1126\/science.285.5428.751","volume":"285","author":"E. Marcotte","year":"1999","unstructured":"Marcotte, E., Pellegrini, M., Ng, H.L., Rice, D.W., Yeates, T.O., Eisenberg, D.: Detecting protein function and protein-protein interactions from genome sequences. Science\u00a0285, 751\u2013753 (1999)","journal-title":"Science"},{"issue":"9","key":"34_CR11","doi-asserted-by":"publisher","first-page":"324","DOI":"10.1016\/S0968-0004(98)01274-2","volume":"23","author":"T. Dandekar","year":"1998","unstructured":"Dandekar, T., Snela, B., Huynena, M., Bork, P.: Conservation of gene order: a fingerprint of proteins that physically interact. Trends in Biochemical Sciences\u00a023(9), 324\u2013328 (1998)","journal-title":"Trends in Biochemical Sciences"},{"key":"34_CR12","doi-asserted-by":"publisher","first-page":"4285","DOI":"10.1073\/pnas.96.8.4285","volume":"96","author":"M. Pellegrini","year":"1999","unstructured":"Pellegrini, M., Marcotte, E.M., Thompson, M., Eisenberg, J., Yeates, T.O.: Assigning protein functions by comparative genome analysis:protein phylogenetic profiles. Proc. Natl. Acad. Sci. USA\u00a096, 4285\u20134288 (1999)","journal-title":"Proc. Natl. Acad. Sci. USA"},{"issue":"5644","key":"34_CR13","doi-asserted-by":"publisher","first-page":"449","DOI":"10.1126\/science.1087361","volume":"302","author":"R. Jansen","year":"2003","unstructured":"Jansen, R., Yu, H.Y., Greenbaum, D., Kluger, Y., Krogan, N.J., Chung, S., Emili, A., Snyder, M., Greenblatt, J.F., Gerstein, M.: A bayesian networks approach for predicting protein-protein interactions from genomic data. Science\u00a0302(5644), 449\u2013453 (2003)","journal-title":"Science"},{"key":"34_CR14","doi-asserted-by":"publisher","first-page":"154","DOI":"10.1186\/1471-2105-5-154","volume":"5","author":"N. Lin","year":"2004","unstructured":"Lin, N., Wu, B.L., Jansen, R., Gerstein, M., Zhao, H.Y.: Information assessment on predicting protein-protein interactions. BMC Bioinformatics\u00a05, 154 (2004)","journal-title":"BMC Bioinformatics"},{"issue":"7","key":"34_CR15","doi-asserted-by":"publisher","first-page":"2137","DOI":"10.1093\/nar\/gkl219","volume":"34","author":"X.M. Wu","year":"2006","unstructured":"Wu, X.M., Zhu, L., Guo, J., Zhang, D.Y., Lin, K.: Predicting protein-protein interactions based only on sequences information. Nucleic Acids Research\u00a034(7), 2137\u20132150 (2006)","journal-title":"Nucleic Acids Research"},{"issue":"24","key":"34_CR16","doi-asserted-by":"publisher","first-page":"4394","DOI":"10.1093\/bioinformatics\/bti721","volume":"21","author":"X.W. Chen","year":"2005","unstructured":"Chen, X.W., Liu, M.: Prediction of protein-protein interactions using random decision forest framework. Bioinformatics\u00a021(24), 4394\u20134400 (2005)","journal-title":"Bioinformatics"},{"key":"34_CR17","doi-asserted-by":"publisher","first-page":"41","DOI":"10.1093\/nar\/gkh092","volume":"32","author":"H.W. Mewes","year":"2004","unstructured":"Mewes, H.W., Amid, C., Arnold, R., Frishman, D., G\u00fcldener, U., Mannhaupt, G., M\u00fcnsterk\u00f6tter, M., Pagel, P., Strack, N., St\u00fcmpflen, V., Warfsmann, J., Ruepp, A.: Mips: analysis and annotation of proteins from whole genomes. Nucleic Acids Research\u00a032, 41\u201344 (2004)","journal-title":"Nucleic Acids Research"},{"issue":"suppl.","key":"34_CR18","first-page":"67","volume":"387","author":"J. Michael Cherry","year":"1997","unstructured":"Michael Cherry, J., Ball, C., Weng, S., Juvik, G., Schmidt, R., Adler, C., Dunn, B., Dwight, S., Riles, L., Mortimer, R.K., Botstein, D.: Genetic and physical maps of saccharomyces cerevisiae. Proteins\u00a0387(suppl.), 67\u201373 (1997)","journal-title":"Proteins"},{"issue":"suppl. 1","key":"34_CR19","doi-asserted-by":"publisher","first-page":"2","DOI":"10.1186\/1471-2105-7-S1-S2","volume":"7","author":"A. Ben-Hur","year":"2006","unstructured":"Ben-Hur, A., Noble, W.S.: Choosing negative examples for the prediction of protein-protein interactions. BMC Bioinformatics\u00a07(suppl. 1), S2 (2006)","journal-title":"BMC Bioinformatics"},{"issue":"1","key":"34_CR20","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1038\/75556","volume":"25","author":"The Gene Ontology Consortium","year":"2000","unstructured":"The Gene Ontology Consortium: Gene ontology: tool for the unification of biology. Nature Genetics\u00a025(1), 25\u201329 (2000)","journal-title":"Nature Genetics"},{"key":"34_CR21","doi-asserted-by":"publisher","first-page":"5","DOI":"10.1023\/A:1010933404324","volume":"45","author":"L. Breiman","year":"2001","unstructured":"Breiman, L.: Random forests. Machine Learning\u00a045, 5\u201332 (2001)","journal-title":"Machine Learning"},{"key":"34_CR22","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1145\/1656274.1656278","volume":"11","author":"M. Hall","year":"2009","unstructured":"Hall, M., Frank, E., Holmes, G., Pfahringer, B., Reutemann, P., Witten, I.: The weka data mining software: An update. SIGKDD Explorations\u00a011, 1 (2009)","journal-title":"SIGKDD Explorations"}],"container-title":["Lecture Notes in Computer Science","Life System Modeling and Intelligent Computing"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-15615-1_34.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,4,30]],"date-time":"2021-04-30T12:59:02Z","timestamp":1619787542000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-642-15615-1_34"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2010]]},"ISBN":["9783642156144","9783642156151"],"references-count":22,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-15615-1_34","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2010]]}}}