{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,5]],"date-time":"2024-09-05T23:53:53Z","timestamp":1725580433507},"publisher-location":"Berlin, Heidelberg","reference-count":17,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783642202667"},{"type":"electronic","value":"9783642202674"}],"license":[{"start":{"date-parts":[[2011,1,1]],"date-time":"2011-01-01T00:00:00Z","timestamp":1293840000000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2011]]},"DOI":"10.1007\/978-3-642-20267-4_41","type":"book-chapter","created":{"date-parts":[[2011,4,8]],"date-time":"2011-04-08T20:34:38Z","timestamp":1302294878000},"page":"393-399","source":"Crossref","is-referenced-by-count":0,"title":["Similarity of Transcription Profiles for Genes in Gene Sets"],"prefix":"10.1007","author":[{"given":"Marko","family":"Toplak","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Toma\u017c","family":"Curk","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bla\u017c","family":"Zupan","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"41_CR1","doi-asserted-by":"crossref","unstructured":"Anastassiou, D.: Computational analysis of the synergy among multiple interacting genes. Mol. Syst. Biol.\u00a03(83) (February 2007)","DOI":"10.1038\/msb4100124"},{"issue":"1","key":"41_CR2","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1038\/75556","volume":"25","author":"M. Ashburner","year":"2000","unstructured":"Ashburner, M., Ball, C., Blake, J., Botstein, D., Butler, H., Cherry, J., Davis, A., Dolinski, K., Dwight, S., Eppig, J., et al.: Gene ontology: tool for the unification of biology. Nature genetics\u00a025(1), 25\u201329 (2000)","journal-title":"Nature genetics"},{"key":"41_CR3","doi-asserted-by":"publisher","first-page":"760","DOI":"10.1093\/nar\/gkl887","volume":"35","author":"T. Barrett","year":"2007","unstructured":"Barrett, T., Troup, D.B., Wilhite, S.E., Ledoux, P., Rudnev, D., Evangelista, C., Kim, I.F., Soboleva, A., Tomashevsky, M., Edgar, R.: NCBI GEO: mining tens of millions of expression profiles\u2013database and tools update. Nucl. Acids Res.\u00a035, D760\u2013765 (2007)","journal-title":"Nucl. Acids Res."},{"issue":"6","key":"41_CR4","doi-asserted-by":"publisher","first-page":"787","DOI":"10.1016\/j.jbi.2007.06.005","volume":"40","author":"R. Bellazzi","year":"2007","unstructured":"Bellazzi, R., Zupan, B.: Towards knowledge-based gene expression data mining. Journal of Biomedical Informatics\u00a040(6), 787\u2013802 (2007)","journal-title":"Journal of Biomedical Informatics"},{"issue":"11","key":"41_CR5","doi-asserted-by":"publisher","first-page":"2730","DOI":"10.1093\/bioinformatics\/bti398","volume":"21","author":"N. Bhardwaj","year":"2005","unstructured":"Bhardwaj, N., Lu, H.: Correlation between gene expression profiles and protein\u2013protein interactions within and across genomes. Bioinformatics\u00a021(11), 2730 (2005)","journal-title":"Bioinformatics"},{"key":"41_CR6","doi-asserted-by":"crossref","unstructured":"Dem\u0161ar, J., Zupan, B., Leban, G.: Orange: From experimental machine learning to interactive data mining, white paper (2004)","DOI":"10.1007\/978-3-540-30116-5_58"},{"issue":"24","key":"41_CR7","doi-asserted-by":"publisher","first-page":"9033","DOI":"10.1073\/pnas.0402591101","volume":"101","author":"H. Fraser","year":"2004","unstructured":"Fraser, H., Hirsh, A., Wall, D., Eisen, M.: Coevolution of gene expression among interacting proteins. Proceedings of the National Academy of Sciences of the United States of America\u00a0101(24), 9033 (2004)","journal-title":"Proceedings of the National Academy of Sciences of the United States of America"},{"key":"41_CR8","series-title":"Lecture Notes in Artificial Intelligence","doi-asserted-by":"publisher","first-page":"229","DOI":"10.1007\/978-3-540-39804-2_22","volume-title":"Knowledge Discovery in Databases: PKDD 2003","author":"A. Jakulin","year":"2003","unstructured":"Jakulin, A., Bratko, I.: Analyzing attribute dependencies. In: Lavra\u010d, N., Gamberger, D., Todorovski, L., Blockeel, H. (eds.) PKDD 2003. LNCS (LNAI), vol.\u00a02838, pp. 229\u2013240. Springer, Heidelberg (2003)"},{"issue":"1","key":"41_CR9","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1101\/gr.205602","volume":"12","author":"R. Jansen","year":"2002","unstructured":"Jansen, R., Greenbaum, D., Gerstein, M.: Relating whole-genome expression data with protein-protein interactions. Genome Research\u00a012(1), 37 (2002)","journal-title":"Genome Research"},{"issue":"16","key":"41_CR10","doi-asserted-by":"publisher","first-page":"1990","DOI":"10.1093\/bioinformatics\/btq323","volume":"26","author":"M. Jelizarow","year":"2010","unstructured":"Jelizarow, M., Guillemot, V., Tenenhaus, A., Strimmer, K., Boulesteix, A.: Over-optimism in bioinformatics: an illustration. Bioinformatics\u00a026(16), 1990 (2010)","journal-title":"Bioinformatics"},{"issue":"Database issue","key":"41_CR11","doi-asserted-by":"publisher","first-page":"355","DOI":"10.1093\/nar\/gkp896","volume":"38","author":"M. Kanehisa","year":"2010","unstructured":"Kanehisa, M., Goto, S., Furumichi, M., Tanabe, M., Hirakawa, M.: KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Research\u00a038(Database issue), D355 (2010)","journal-title":"Nucleic Acids Research"},{"issue":"11","key":"41_CR12","doi-asserted-by":"publisher","first-page":"1000217","DOI":"10.1371\/journal.pcbi.1000217","volume":"4","author":"E. Lee","year":"2008","unstructured":"Lee, E., Chuang, H.Y., Kim, J.W., et al.: Inferring pathway activity toward precise disease classification. PLoS Comput. Biol.\u00a04(11), e1000217 (2008)","journal-title":"PLoS Comput. Biol."},{"issue":"6","key":"41_CR13","doi-asserted-by":"publisher","first-page":"1085","DOI":"10.1101\/gr.1910904","volume":"14","author":"H. Lee","year":"2004","unstructured":"Lee, H., Hsu, A., Sajdak, J., Qin, J., Pavlidis, P.: Coexpression analysis of human genes across many microarray data sets. Genome Research\u00a014(6), 1085 (2004)","journal-title":"Genome Research"},{"key":"41_CR14","unstructured":"Mramor, M., Toplak, M., Leban, G., Curk, T., Dem\u0161ar, J., Zupan, B.: On utility of gene set signatures in gene expression-based cancer class prediction. In: Machine Learning in Systems Biology, p. 65 (2009)"},{"issue":"3","key":"41_CR15","doi-asserted-by":"publisher","first-page":"189","DOI":"10.1093\/bib\/bbn001","volume":"9","author":"D. Nam","year":"2008","unstructured":"Nam, D., Kim, S.Y.: Gene-set approach for expression pattern analysis. Brief Bioinform\u00a09(3), 189\u2013197 (2008)","journal-title":"Brief Bioinform"},{"key":"41_CR16","doi-asserted-by":"crossref","unstructured":"Sheskin, D.: Handbook of parametric and nonparametric statistical procedures. CRC Pr I Llc (2004)","DOI":"10.4324\/9780203489536"},{"issue":"suppl. 1","key":"41_CR17","doi-asserted-by":"publisher","first-page":"535","DOI":"10.1093\/nar\/gkj109","volume":"34","author":"C. Stark","year":"2006","unstructured":"Stark, C., Breitkreutz, B., Reguly, T., Boucher, L., Breitkreutz, A., Tyers, M.: BioGRID: a general repository for interaction datasets. Nucleic Acids Research\u00a034(suppl. 1), 535 (2006)","journal-title":"Nucleic Acids Research"}],"container-title":["Lecture Notes in Computer Science","Adaptive and Natural Computing Algorithms"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-20267-4_41","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,5,22]],"date-time":"2019-05-22T20:43:07Z","timestamp":1558557787000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-642-20267-4_41"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2011]]},"ISBN":["9783642202667","9783642202674"],"references-count":17,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-20267-4_41","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2011]]}}}